RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 SYS1Q8N2H4 156 aa9.87□□□□□ -0.83
RABGGTA-213ENST00000560127 OR13A1Q8NGR1 328 aa9.87□□□□□ -0.83
RABGGTA-213ENST00000560127 OR10X1Q8NGY0 326 aa9.87□□□□□ -0.83
RABGGTA-213ENST00000560127 IL17DQ8TAD2 202 aa9.87□□□□□ -0.83
RABGGTA-213ENST00000560127 LINC00476Q8WZB0 136 aa9.87□□□□□ -0.83
RABGGTA-213ENST00000560127 RBMXL1Q96E39 390 aaKnown RBP9.87□□□□□ -0.83
RABGGTA-213ENST00000560127 LINC00574Q9H8X3 128 aa9.87□□□□□ -0.83
RABGGTA-213ENST00000560127 FKBP14Q9NWM8 211 aa9.87□□□□□ -0.83
RABGGTA-213ENST00000560127 KIAA1456Q9P272 454 aa9.87□□□□□ -0.83
RABGGTA-213ENST00000560127 RPL36Q9Y3U8 105 aaKnown RBP9.87□□□□□ -0.83
RABGGTA-213ENST00000560127 VPS13DQ5THJ4 4388 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 IGKV1-9A0A0C4DH69 117 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 NPIPB11E5RHQ5 1161 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 G3V318 75 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 SYT7O43581 403 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 IL1AP01583 271 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 GAPDHP04406 335 aaKnown RBP9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 OR5H8P0DN80 308 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 SOX6P35712 828 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 RBP2P50120 134 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 GTF2A1P52655 376 aaPredicted RBP9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 F2RL1P55085 397 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 MTCP1P56278 107 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 PDZK1IP1Q13113 114 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 OR2G6Q5TZ20 316 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 TMEM65Q6PI78 240 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 FAM220AQ7Z4H9 259 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 SGPP2Q8IWX5 399 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 CHST4Q8NCG5 386 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 TMEM104Q8NE00 496 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 DNAAF1Q8NEP3 725 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 GGHQ92820 318 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 ADAT3Q96EY9 351 aaPredicted RBP9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 OR51J1Q9H342 316 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 GHITMQ9H3K2 345 aa9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 PAK1IP1Q9NWT1 392 aaPredicted RBP9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 DIMT1Q9UNQ2 313 aaKnown RBP9.86□□□□□ -0.83
RABGGTA-213ENST00000560127 DNAH6Q9C0G6 4158 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 ZNF736B4DX44 427 aaPredicted RBP9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 H0YJX3 145 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 HSPA12AO43301 675 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 KDM4BO94953 1096 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 ATP6V1G2O95670 118 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 FADS2O95864 444 aaKnown RBP9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 MOSP00540 346 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 SERPINA3P01011 423 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 IGLV1-40P01703 118 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 ISG15P05161 165 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 OR8U9P0C7N5 309 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 CCR9P51686 369 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 KCTD20Q7Z5Y7 419 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 C8orf59Q8N0T1 100 aaPredicted RBP9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 ZNF565Q8N9K5 539 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 SETD9Q8NE22 299 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 OR51T1Q8NGJ9 327 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 RFESDQ8TAC1 157 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 CHCHD6Q9BRQ6 235 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 RETNQ9HD89 108 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 TPSG1Q9NRR2 321 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 PSORS1C1Q9UIG5 152 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 KIF25Q9UIL4 384 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 WSB1Q9Y6I7 421 aa9.85□□□□□ -0.83
RABGGTA-213ENST00000560127 MEIKINA0A087WXM9 373 aa9.84□□□□□ -0.83
RABGGTA-213ENST00000560127 FAM90A10PA6NDY2 464 aa9.84□□□□□ -0.83
RABGGTA-213ENST00000560127 SNTNA6NMZ2 147 aa9.84□□□□□ -0.83
RABGGTA-213ENST00000560127 LINC01619G3V211 115 aa9.84□□□□□ -0.83
RABGGTA-213ENST00000560127 HTR1AP08908 422 aa9.84□□□□□ -0.83
RABGGTA-213ENST00000560127 UBCP0CG48 685 aaKnown RBP9.84□□□□□ -0.83
RABGGTA-213ENST00000560127 ARSBP15848 533 aa9.84□□□□□ -0.83
RABGGTA-213ENST00000560127 CD1BP29016 333 aa9.84□□□□□ -0.83
RABGGTA-213ENST00000560127 RAB9AP51151 201 aa9.84□□□□□ -0.83
RABGGTA-213ENST00000560127 RIPK1Q13546 671 aa9.84□□□□□ -0.83
RABGGTA-213ENST00000560127 ALKBH1Q13686 389 aaKnown RBP9.84□□□□□ -0.83
RABGGTA-213ENST00000560127 SLC16A12Q6ZSM3 486 aa9.84□□□□□ -0.83
RABGGTA-213ENST00000560127 DDB2Q92466 427 aa9.84□□□□□ -0.83
RABGGTA-213ENST00000560127 RFT1Q96AA3 541 aa9.84□□□□□ -0.83
RABGGTA-213ENST00000560127 PDCD1LG2Q9BQ51 273 aa9.84□□□□□ -0.83
RABGGTA-213ENST00000560127 TOLLIPQ9H0E2 274 aa9.84□□□□□ -0.83
RABGGTA-213ENST00000560127 NCOR1P1Q9H4R4 102 aa9.84□□□□□ -0.83
RABGGTA-213ENST00000560127 PLCXD1Q9NUJ7 323 aa9.84□□□□□ -0.83
RABGGTA-213ENST00000560127 ZNF107Q9UII5 783 aaPredicted RBP9.84□□□□□ -0.83
RABGGTA-213ENST00000560127 IGHV4OR15-8A0A075B7B6 117 aa9.83□□□□□ -0.84
RABGGTA-213ENST00000560127 A0A087WW49 117 aa9.83□□□□□ -0.84
RABGGTA-213ENST00000560127 HSPB6O14558 160 aa9.83□□□□□ -0.84
RABGGTA-213ENST00000560127 DEGS1O15121 323 aa9.83□□□□□ -0.84
RABGGTA-213ENST00000560127 ATF1P18846 271 aa9.83□□□□□ -0.84
RABGGTA-213ENST00000560127 CNTFRP26992 372 aa9.83□□□□□ -0.84
RABGGTA-213ENST00000560127 DCKP27707 260 aa9.83□□□□□ -0.84
RABGGTA-213ENST00000560127 C21orf33P30042 268 aaPredicted RBP9.83□□□□□ -0.84
RABGGTA-213ENST00000560127 SSTR5P35346 364 aa9.83□□□□□ -0.84
RABGGTA-213ENST00000560127 PITPNAQ00169 270 aa9.83□□□□□ -0.84
RABGGTA-213ENST00000560127 ST3GAL4Q11206 333 aa9.83□□□□□ -0.84
RABGGTA-213ENST00000560127 CDK5R1Q15078 307 aa9.83□□□□□ -0.84
RABGGTA-213ENST00000560127 IZUMO2Q6UXV1 221 aa9.83□□□□□ -0.84
RABGGTA-213ENST00000560127 OR8H1Q8NGG4 311 aa9.83□□□□□ -0.84
RABGGTA-213ENST00000560127 MRGPRDQ8TDS7 321 aa9.83□□□□□ -0.84
RABGGTA-213ENST00000560127 RTN4IP1Q8WWV3 396 aaPredicted RBP9.83□□□□□ -0.84
RABGGTA-213ENST00000560127 PP6455Q8WZ26 134 aa9.83□□□□□ -0.84
RABGGTA-213ENST00000560127 C10orf35Q96D05 121 aa9.83□□□□□ -0.84
RABGGTA-213ENST00000560127 OR4C12Q96R67 309 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms