RNA–Protein interactions for RNA: ENST00000558963.2

AC087516.2-201, humanhuman

TSL 3 BASIC

Gene AC087516.2, Length 3,042 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087516.2-201ENST00000558963 WIPI2Q9Y4P8 454 aa5.51□□□□□ -1.53
AC087516.2-201ENST00000558963 TIMM9Q9Y5J7 89 aa5.51□□□□□ -1.53
AC087516.2-201ENST00000558963 PUS1Q9Y606 427 aaKnown RBP eCLIP5.51□□□□□ -1.53
AC087516.2-201ENST00000558963 ZNF891A8MT65 544 aaPredicted RBP5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 MKRN2OSH3BPM6 223 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 PHF1O43189 567 aaPredicted RBP5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 NEURL1O76050 574 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 OPN1LWP04000 364 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 CCL4P13236 92 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 FOSL1P15407 271 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 ERVFRD-1P60508 538 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 PKIAP61925 76 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 DEFA6Q01524 100 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 GABRA6Q16445 453 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 CLEC9AQ6UXN8 241 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 TBC1D26Q86UD7 250 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 ZNF383Q8NA42 475 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 RNASEH2CQ8TDP1 164 aaKnown RBP5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 MBD3L1Q8WWY6 194 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 TOMM40LQ969M1 308 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 ALKBH3Q96Q83 286 aaPredicted RBP5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 CTDSP1Q9GZU7 261 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 ELL3Q9HB65 397 aaPredicted RBP5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 UFSP2Q9NUQ7 469 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 CISD1Q9NZ45 108 aaKnown RBP5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 DMDP11532 3685 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 TRBV23-1A0A0A0MS06 115 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 J3QT63 122 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 MRPL33O75394 65 aaKnown RBP5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 RFPL3SP0C7P2 107 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 F2RP25116 425 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 RRADP55042 308 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 HAGHQ16775 308 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 AARDQ4LEZ3 155 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 TSPO2Q5TGU0 170 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 C1orf174Q8IYL3 243 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 CMTM1Q8IZ96 169 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 SLAMF9Q96A28 289 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 C14orf144Q96I85 54 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 SSX3Q99909 188 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 GLRX2Q9NS18 164 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 SLC7A10Q9NS82 523 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 ABI3Q9P2A4 366 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 OR2W1Q9Y3N9 320 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 MAP1BP46821 2468 aaKnown RBP5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 NKX2-6A6NCS4 301 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 FAM24AA6NFZ4 105 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 OR5H1A6NKK0 313 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 PPP1R2P9O14990 202 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 GPR37O15354 613 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 CYB5R3P00387 301 aaPredicted RBP5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 OPRM1P35372 400 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 PAX9P55771 341 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 NDUFA6P56556 154 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 GNG3P63215 75 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 SERF2P84101 59 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 ZNF674Q2M3X9 581 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 TMEM249Q2WGJ8 235 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 COA6Q5JTJ3 125 aaKnown RBP5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 SPIN3Q5JUX0 258 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 SLC25A26Q70HW3 274 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 YRDCQ86U90 279 aaKnown RBP5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 MDS2Q8NDY4 140 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 OR56B2PQ8NGI1 322 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 OR5L1Q8NGL2 311 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 AGMATQ9BSE5 352 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 OR51I2Q9H344 312 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 ZNF442Q9H7R0 627 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 CDH20Q9HBT6 801 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 HES4Q9HCC6 221 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 MTCH1Q9NZJ7 389 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 TAAR3PQ9P1P4 343 aa5.5□□□□□ -1.53
AC087516.2-201ENST00000558963 IGKV1-6A0A0C4DH72 117 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 TMEM210A6NLX4 147 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 TRAPPC2LH3BP13 241 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 PGLYRP1O75594 196 aaPredicted RBP5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 SYNGR4O95473 234 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 P0C879 139 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 BCL3P20749 454 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 ARF1P84077 181 aaKnown RBP5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 EIF4EBP1Q13541 118 aaPredicted RBP5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 ZNF146Q15072 292 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 PHLDA2Q53GA4 152 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 FAM90A2PQ658T7 463 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 Q6P435 159 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 SPNS3Q6ZMD2 512 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 ZNF818PQ6ZRF7 136 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 ZNF695Q8IW36 515 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 CYB561D1Q8N8Q1 229 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 NANOS1Q8WY41 292 aaKnown RBP5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 PYGO2Q9BRQ0 406 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 SMOC1Q9H4F8 434 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 P4HTMQ9NXG6 502 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 ZNF581Q9P0T4 197 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 LIPGQ9Y5X9 500 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 ASCC3Q8N3C0 2202 aaKnown RBP5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 PINLYPA6NC86 204 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 CDRT15L2A8MXV6 281 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 H0YL77 283 aa5.49□□□□□ -1.53
AC087516.2-201ENST00000558963 DVL1O14640 695 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms