RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 RAB13P51153 203 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 ARHGDIBP52566 201 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 TMEM50BP56557 158 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 TMEM30BQ3MIR4 351 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 LIAT1Q6ZQX7 453 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 Q6ZTK2 550 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 OR56B1Q8NGI3 324 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 OR4F5Q8NH21 305 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 MRPL30Q8TCC3 161 aaKnown RBP8.63□□□□□ -1.03
LINC00239-201ENST00000556973 CHCHD6Q9BRQ6 235 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 MMP28Q9H239 520 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 RIMS4Q9H426 269 aaPredicted RBP8.63□□□□□ -1.03
LINC00239-201ENST00000556973 BEX1Q9HBH7 125 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 RAB18Q9NP72 206 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 ABCB10Q9NRK6 738 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 PITPNC1Q9UKF7 332 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 PSG11Q9UQ72 335 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 AMMECR1Q9Y4X0 333 aaPredicted RBP8.63□□□□□ -1.03
LINC00239-201ENST00000556973 MMP24Q9Y5R2 645 aa8.63□□□□□ -1.03
LINC00239-201ENST00000556973 LOC100506127A0A0U1RQW1 187 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 TMEM272A0A1B0GTI8 110 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 METTL21EPA6NDL7 271 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 TRIM64CA6NLI5 447 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 FOXI3A8MTJ6 420 aaPredicted RBP8.62□□□□□ -1.03
LINC00239-201ENST00000556973 OOSP1A8MZH6 123 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 C12orf77C9JDV5 145 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 HBZP02008 142 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 BRS3P32247 399 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 SDC2P34741 201 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 RAG2P55895 527 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 LOXL3P58215 753 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 RELBQ01201 579 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 LY6EQ16553 131 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 TIMM50Q3ZCQ8 353 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 Q3ZCU0 254 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 UTF1Q5T230 341 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 TPTE2P1Q5T6R2 138 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 DHRS7BQ6IAN0 325 aaPredicted RBP8.62□□□□□ -1.03
LINC00239-201ENST00000556973 CCDC144NLQ6NUI1 221 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 NR2C2APQ86WQ0 139 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 PRR18Q8N4B5 295 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 C8orf31Q8N9H6 132 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 DTX3Q8N9I9 347 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 TAF15Q92804 592 aaKnown RBP eCLIP8.62□□□□□ -1.03
LINC00239-201ENST00000556973 LEAP2Q969E1 77 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 PTX4Q96A99 478 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 TAF9BQ9HBM6 251 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 GFOD1Q9NXC2 390 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 TCF19Q9Y242 345 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 ATRQ13535 2644 aa8.62□□□□□ -1.03
LINC00239-201ENST00000556973 CLPSL1A2RUU4 121 aa8.61□□□□□ -1.03
LINC00239-201ENST00000556973 A6NDX4 124 aa8.61□□□□□ -1.03
LINC00239-201ENST00000556973 TSPAN9O75954 239 aa8.61□□□□□ -1.03
LINC00239-201ENST00000556973 NAPSAO96009 420 aa8.61□□□□□ -1.03
LINC00239-201ENST00000556973 IGHV3-7P01780 117 aa8.61□□□□□ -1.03
LINC00239-201ENST00000556973 MDKP21741 143 aaPredicted RBP8.61□□□□□ -1.03
LINC00239-201ENST00000556973 MNDAP41218 407 aa8.61□□□□□ -1.03
LINC00239-201ENST00000556973 GNG10P50151 68 aa8.61□□□□□ -1.03
LINC00239-201ENST00000556973 HTD2P86397 168 aa8.61□□□□□ -1.03
LINC00239-201ENST00000556973 PLA1AQ53H76 456 aa8.61□□□□□ -1.03
LINC00239-201ENST00000556973 ZNF880Q6PDB4 577 aa8.61□□□□□ -1.03
LINC00239-201ENST00000556973 OR10X1Q8NGY0 326 aa8.61□□□□□ -1.03
LINC00239-201ENST00000556973 RPEQ96AT9 228 aa8.61□□□□□ -1.03
LINC00239-201ENST00000556973 GALMQ96C23 342 aa8.61□□□□□ -1.03
LINC00239-201ENST00000556973 YIPF6Q96EC8 236 aa8.61□□□□□ -1.03
LINC00239-201ENST00000556973 ARHGAP5-AS1Q96IT6 56 aa8.61□□□□□ -1.03
LINC00239-201ENST00000556973 OCSTAMPQ9BR26 566 aa8.61□□□□□ -1.03
LINC00239-201ENST00000556973 CENPOQ9BU64 300 aa8.61□□□□□ -1.03
LINC00239-201ENST00000556973 ZNF747Q9BV97 191 aa8.61□□□□□ -1.03
LINC00239-201ENST00000556973 C16orf95Q9H693 158 aa8.61□□□□□ -1.03
LINC00239-201ENST00000556973 CHMP1AQ9HD42 196 aaPredicted RBP8.61□□□□□ -1.03
LINC00239-201ENST00000556973 AK3Q9UIJ7 227 aa8.61□□□□□ -1.03
LINC00239-201ENST00000556973 COL6A5A8TX70 2615 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 TRBV6-6A0A0A6YYG2 114 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 IGHV3-43A0A0B4J1X8 118 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 SMIM30A4D0T7 59 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 AIREO43918 545 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 TMEM127O75204 238 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 IGHV3-43DP0DP04 118 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 SLC2A2P11168 524 aaPredicted RBP8.6□□□□□ -1.03
LINC00239-201ENST00000556973 RAB7AP51149 207 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 EFNB2P52799 333 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 MXD1Q05195 221 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 PLA2G7Q13093 441 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 MADCAM1Q13477 382 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 MORN2Q502X0 79 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 PLAC9Q5JTB6 97 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 LY6G6FQ5SQ64 297 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 STEAP3Q658P3 488 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 OLFML2AQ68BL7 652 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 SFXN4Q6P4A7 337 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 CCBE1Q6UXH8 406 aaPredicted RBP8.6□□□□□ -1.03
LINC00239-201ENST00000556973 Q6ZSV7 163 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 LINC00311Q8N616 119 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 OR10R2Q8NGX6 335 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 OR1L1Q8NH94 360 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 LINC01006Q8NI28 216 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 UBALD1Q8TB05 177 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 RAB3CQ96E17 227 aa8.6□□□□□ -1.03
LINC00239-201ENST00000556973 CYYR1Q96J86 154 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms