RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 TOMM34Q15785 309 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-210ENST00000556718 USF2Q15853 346 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-210ENST00000556718 TSPO2Q5TGU0 170 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 STEAP4Q687X5 459 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 OR2T5Q6IEZ7 315 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 NDUFAF7Q7L592 441 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 ZNF720Q7Z2F6 126 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 PID1Q7Z2X4 250 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 LINC01551Q86U37 167 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 NAA40Q86UY6 237 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 SLC30A8Q8IWU4 369 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 RIMKLAQ8IXN7 391 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 Q8N402 240 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 ARRDC1Q8N5I2 433 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 ZNF283Q8N7M2 679 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 Q8N976 141 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 C11orf72Q8NBR9 251 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 PXT1Q8NFP0 134 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 OR52E4Q8NGH9 312 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 OR8D4Q8NGM9 314 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 OR5AR1Q8NGP9 310 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 OR2L8Q8NGY9 312 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 OR2T4Q8NH00 348 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 OR2T29Q8NH02 315 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 TERB2Q8NHR7 220 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 PHOSPHO2Q8TCD6 241 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 ZNF675Q8TD23 568 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 DTD1Q8TEA8 209 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 ACOT12Q8WYK0 555 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 OR8D1Q8WZ84 308 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 TFGQ92734 400 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-210ENST00000556718 TMEM203Q969S6 136 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 LINC00052Q96N35 136 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 TEAD3Q99594 435 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 C2orf88Q9BSF0 95 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 CHAC1Q9BUX1 264 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 REG4Q9BYZ8 158 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 SLC25A39Q9BZJ4 359 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-210ENST00000556718 TOLLIPQ9H0E2 274 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 HDHD2Q9H0R4 259 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 SLC38A1Q9H2H9 487 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 RPP21Q9H633 154 aaKnown RBP2.86□□□□□ -1.95
PRPF39-210ENST00000556718 EXOSC4Q9NPD3 245 aaKnown RBP2.86□□□□□ -1.95
PRPF39-210ENST00000556718 SMCO4Q9NRQ5 59 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 VAPAQ9P0L0 249 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 METTL1Q9UBP6 276 aaKnown RBP2.86□□□□□ -1.95
PRPF39-210ENST00000556718 ZNF223Q9UK11 482 aaPredicted RBP2.86□□□□□ -1.95
PRPF39-210ENST00000556718 CES1P1Q9UKY3 287 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 HES2Q9Y543 173 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 V9GYY9 64 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 ASTN1O14525 1302 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 KIF13BQ9NQT8 1826 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 LRRC37A3O60309 1634 aa2.86□□□□□ -1.95
PRPF39-210ENST00000556718 MARF1Q9Y4F3 1742 aaKnown RBP2.85□□□□□ -1.95
PRPF39-210ENST00000556718 MEIKINA0A087WXM9 373 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 IGHV1-69DA0A0B4J2H0 117 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 A0A1W2PQL4 384 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-210ENST00000556718 ZNF670-ZNF695F2Z2N8 137 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 K7ERQ8 282 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 RFXANKO14593 260 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 HPGDSO60760 199 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 NDUFS6O75380 124 aaKnown RBP2.85□□□□□ -1.95
PRPF39-210ENST00000556718 ATG12O94817 140 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 AHSA1O95433 338 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 GCGP01275 180 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 HLA-DQB1P01920 261 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 MT-ND4LP03901 98 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 HTR1AP08908 422 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 UBBP0CG47 229 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 IGHV1-8P0DP01 117 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 GABRG2P18507 467 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 MDKP21741 143 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-210ENST00000556718 AGTR1P30556 359 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 S100A11P31949 105 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 TGFBR2P37173 567 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 GCLMP48507 274 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 XKP51811 444 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 CEBPGP53567 150 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 UBA52P62987 128 aaKnown RBP2.85□□□□□ -1.95
PRPF39-210ENST00000556718 DYNLT1P63172 113 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 PAFAH1B2P68402 229 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 EMX2Q04743 252 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 ST3GAL4Q11206 333 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 MAD2L1BPQ15013 274 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-210ENST00000556718 ZNHIT3Q15649 155 aaPredicted RBP2.85□□□□□ -1.95
PRPF39-210ENST00000556718 FAM78AQ5JUQ0 283 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 IDNKQ5T6J7 187 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 HIST2H3PS2Q5TEC6 136 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 SAXO2Q658L1 398 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 ASCL4Q6XD76 172 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 SLC16A13Q7RTY0 426 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 CALHM1Q8IU99 346 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 Q8N7P7 452 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 OR6N2Q8NGY6 317 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 COQ8AQ8NI60 647 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 SPPL2BQ8TCT7 592 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 ZNF799Q96GE5 643 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 CCDC115Q96NT0 180 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 RBP7Q96R05 134 aa2.85□□□□□ -1.95
PRPF39-210ENST00000556718 ZNF382Q96SR6 550 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms