RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 RPS27AP62979 156 aaKnown RBP9.28□□□□□ -0.92
SLIRP-205ENST00000556310 QRFPP83859 136 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 UNC119Q13432 240 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 LTC4SQ16873 150 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 TMEM30BQ3MIR4 351 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 UTF1Q5T230 341 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 C6orf183Q5T699 404 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 TPTE2P1Q5T6R2 138 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 UBE2UQ5VVX9 321 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 OR10K2Q6IF99 312 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 CCDC144NLQ6NUI1 221 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 TRAT1Q6PIZ9 186 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 CD200R1LQ6Q8B3 271 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 SPARTQ8N0X7 666 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 OR52M1Q8NGK5 317 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 RFESDQ8TAC1 157 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 FCGR1BQ92637 280 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 TM2D1Q9BX74 207 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 KCNK15Q9H427 330 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 PLGRKTQ9HBL7 147 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 RAB9BQ9NP90 201 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 FBLN5Q9UBX5 448 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 PSG11Q9UQ72 335 aa9.28□□□□□ -0.92
SLIRP-205ENST00000556310 AK6Q9Y3D8 172 aaKnown RBP9.28□□□□□ -0.92
SLIRP-205ENST00000556310 LY6LH3BQJ8 138 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 FAM229AH3BQW9 127 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 CCRL2O00421 344 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 GALP22466 123 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 BRS3P32247 399 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 RANBP1P43487 201 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 KIR2DS4P43632 304 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 RAB11BQ15907 218 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 NKAPLQ5M9Q1 402 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 SYT6Q5T7P8 510 aaPredicted RBP9.27□□□□□ -0.93
SLIRP-205ENST00000556310 C11orf88Q6PI97 169 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 ZNF773Q6PK81 442 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 CCBE1Q6UXH8 406 aaPredicted RBP9.27□□□□□ -0.93
SLIRP-205ENST00000556310 OR2W3Q7Z3T1 314 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 TMEM219Q86XT9 240 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 DTX3Q8N9I9 347 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 CCDC107Q8WV48 283 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 LEAP2Q969E1 77 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 TOMM40LQ969M1 308 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 ARL11Q969Q4 196 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 NEDD4LQ96PU5 975 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 CITED1Q99966 193 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 TRAPPC2LQ9UL33 140 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 LRRC42Q9Y546 428 aa9.27□□□□□ -0.93
SLIRP-205ENST00000556310 VWFP04275 2813 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 TRAV1-2A0A0B4J238 106 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 TRDV1A0A1B0GX56 115 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 UBE2QL1A1L167 161 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 C12orf77C9JDV5 145 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 SDCBPO00560 298 aaPredicted RBP9.26□□□□□ -0.93
SLIRP-205ENST00000556310 SPINT2O43291 252 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 FBXO24O75426 580 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 IGHV3-7P01780 117 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 ARSBP15848 533 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 MYL9P24844 172 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 PSMB9P28065 219 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 MNDAP41218 407 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 GNG10P50151 68 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 PSMD7P51665 324 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 EFNB2P52799 333 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 MADCAM1Q13477 382 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 P2RY14Q15391 338 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 Q3ZCU0 254 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 KCTD21Q4G0X4 260 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 PRR31Q5SQ13 230 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 C16orf82Q7Z2V1 217 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 ZNF554Q86TJ5 538 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 C8orf31Q8N9H6 132 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 OR4K15Q8NH41 348 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 OR2T6Q8NHC8 308 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 UBALD1Q8TB05 177 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 MRPL30Q8TCC3 161 aaKnown RBP9.26□□□□□ -0.93
SLIRP-205ENST00000556310 RPEQ96AT9 228 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 NICN1Q9BSH3 213 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 URM1Q9BTM9 101 aaKnown RBP9.26□□□□□ -0.93
SLIRP-205ENST00000556310 ZNF696Q9H7X3 374 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 MBNL3Q9NUK0 354 aaKnown RBP9.26□□□□□ -0.93
SLIRP-205ENST00000556310 GFOD1Q9NXC2 390 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 V9GY05 133 aa9.26□□□□□ -0.93
SLIRP-205ENST00000556310 A0A0A6YYD4 124 aa9.25□□□□□ -0.93
SLIRP-205ENST00000556310 PDCD5O14737 125 aa9.25□□□□□ -0.93
SLIRP-205ENST00000556310 HBZP02008 142 aa9.25□□□□□ -0.93
SLIRP-205ENST00000556310 RCC1P18754 421 aaPredicted RBP9.25□□□□□ -0.93
SLIRP-205ENST00000556310 LOXL3P58215 753 aa9.25□□□□□ -0.93
SLIRP-205ENST00000556310 KRTAP10-3P60369 221 aa9.25□□□□□ -0.93
SLIRP-205ENST00000556310 SRSF4Q08170 494 aaKnown RBP9.25□□□□□ -0.93
SLIRP-205ENST00000556310 Q8N2B8 174 aa9.25□□□□□ -0.93
SLIRP-205ENST00000556310 LINC00311Q8N616 119 aa9.25□□□□□ -0.93
SLIRP-205ENST00000556310 OR10X1Q8NGY0 326 aa9.25□□□□□ -0.93
SLIRP-205ENST00000556310 FAM3DQ96BQ1 224 aa9.25□□□□□ -0.93
SLIRP-205ENST00000556310 CYYR1Q96J86 154 aa9.25□□□□□ -0.93
SLIRP-205ENST00000556310 AKR1E2Q96JD6 320 aa9.25□□□□□ -0.93
SLIRP-205ENST00000556310 SULT4A1Q9BR01 284 aa9.25□□□□□ -0.93
SLIRP-205ENST00000556310 LPAR5Q9H1C0 372 aa9.25□□□□□ -0.93
SLIRP-205ENST00000556310 ZNF702PQ9H963 129 aa9.25□□□□□ -0.93
SLIRP-205ENST00000556310 SIGLEC9Q9Y336 463 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms