RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 OR52N1Q8NH53 320 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 CT45A3Q8NHU0 189 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 RHOXF1Q8NHV9 184 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 CCDC107Q8WV48 283 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 TSEN15Q8WW01 171 aaKnown RBP11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 APH1BQ8WW43 257 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 PYDC1Q8WXC3 89 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 RITA1Q96K30 269 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 KCTD7Q96MP8 289 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 GNB4Q9HAV0 340 aa11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 MRPS18AQ9NVS2 196 aaKnown RBP11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 ZNF256Q9Y2P7 627 aaPredicted RBP11.16□□□□□ -0.62
CHMP4BP1-201ENST00000556017 TMEM30CPA0ZSE6 113 aa11.15□□□□□ -0.62
CHMP4BP1-201ENST00000556017 MAGEA13PA6NCF6 341 aa11.15□□□□□ -0.62
CHMP4BP1-201ENST00000556017 C12orf77C9JDV5 145 aa11.15□□□□□ -0.62
CHMP4BP1-201ENST00000556017 SDCBPO00560 298 aaPredicted RBP11.15□□□□□ -0.62
CHMP4BP1-201ENST00000556017 OR7C1O76099 320 aaPredicted RBP11.15□□□□□ -0.62
CHMP4BP1-201ENST00000556017 IGLV1-40P01703 118 aa11.15□□□□□ -0.62
CHMP4BP1-201ENST00000556017 GNB1P62873 340 aa11.15□□□□□ -0.62
CHMP4BP1-201ENST00000556017 ZNF260Q3ZCT1 412 aa11.15□□□□□ -0.62
CHMP4BP1-201ENST00000556017 Q3ZCU0 254 aa11.15□□□□□ -0.62
CHMP4BP1-201ENST00000556017 ZNF491Q8N8L2 437 aa11.15□□□□□ -0.62
CHMP4BP1-201ENST00000556017 OR11H1Q8NG94 326 aa11.15□□□□□ -0.62
CHMP4BP1-201ENST00000556017 GPER1Q99527 375 aa11.15□□□□□ -0.62
CHMP4BP1-201ENST00000556017 FAM192AQ9GZU8 254 aa11.15□□□□□ -0.62
CHMP4BP1-201ENST00000556017 FAM118AQ9NWS6 357 aa11.15□□□□□ -0.62
CHMP4BP1-201ENST00000556017 GAR1Q9NY12 217 aaKnown RBP11.15□□□□□ -0.62
CHMP4BP1-201ENST00000556017 RCC2Q9P258 522 aaKnown RBP11.15□□□□□ -0.62
CHMP4BP1-201ENST00000556017 FAM90A10PA6NDY2 464 aa11.14□□□□□ -0.63
CHMP4BP1-201ENST00000556017 G3V318 75 aa11.14□□□□□ -0.63
CHMP4BP1-201ENST00000556017 LALBAP00709 142 aa11.14□□□□□ -0.63
CHMP4BP1-201ENST00000556017 IGFBP3P17936 291 aaPredicted RBP11.14□□□□□ -0.63
CHMP4BP1-201ENST00000556017 SOX6P35712 828 aa11.14□□□□□ -0.63
CHMP4BP1-201ENST00000556017 ALDH3A2P51648 485 aa11.14□□□□□ -0.63
CHMP4BP1-201ENST00000556017 RUNX1Q01196 453 aa11.14□□□□□ -0.63
CHMP4BP1-201ENST00000556017 C19orf54Q5BKX5 351 aa11.14□□□□□ -0.63
CHMP4BP1-201ENST00000556017 ODF3L1Q8IXM7 274 aa11.14□□□□□ -0.63
CHMP4BP1-201ENST00000556017 OR8H1Q8NGG4 311 aa11.14□□□□□ -0.63
CHMP4BP1-201ENST00000556017 OR13C5Q8NGS8 318 aa11.14□□□□□ -0.63
CHMP4BP1-201ENST00000556017 TMEM106AQ96A25 262 aa11.14□□□□□ -0.63
CHMP4BP1-201ENST00000556017 GON7Q9BXV9 100 aa11.14□□□□□ -0.63
CHMP4BP1-201ENST00000556017 ZNF107Q9UII5 783 aaPredicted RBP11.14□□□□□ -0.63
CHMP4BP1-201ENST00000556017 RPSAP08865 295 aaKnown RBP11.13□□□□□ -0.63
CHMP4BP1-201ENST00000556017 SERPINA2P20848 420 aa11.13□□□□□ -0.63
CHMP4BP1-201ENST00000556017 CNTFRP26992 372 aa11.13□□□□□ -0.63
CHMP4BP1-201ENST00000556017 ADARB1P78563 741 aaKnown RBP11.13□□□□□ -0.63
CHMP4BP1-201ENST00000556017 RAB40BQ12829 278 aa11.13□□□□□ -0.63
CHMP4BP1-201ENST00000556017 MRPL28Q13084 256 aaKnown RBP11.13□□□□□ -0.63
CHMP4BP1-201ENST00000556017 LSAMPQ13449 338 aa11.13□□□□□ -0.63
CHMP4BP1-201ENST00000556017 MPV17LQ2QL34 196 aa11.13□□□□□ -0.63
CHMP4BP1-201ENST00000556017 LYPD6Q86Y78 171 aa11.13□□□□□ -0.63
CHMP4BP1-201ENST00000556017 CBR4Q8N4T8 237 aa11.13□□□□□ -0.63
CHMP4BP1-201ENST00000556017 OR1L1Q8NH94 360 aa11.13□□□□□ -0.63
CHMP4BP1-201ENST00000556017 MUC7Q8TAX7 377 aa11.13□□□□□ -0.63
CHMP4BP1-201ENST00000556017 UBE2E2Q96LR5 201 aa11.13□□□□□ -0.63
CHMP4BP1-201ENST00000556017 SLC29A1Q99808 456 aa11.13□□□□□ -0.63
CHMP4BP1-201ENST00000556017 RASL11BQ9BPW5 248 aa11.13□□□□□ -0.63
CHMP4BP1-201ENST00000556017 METTL9Q9H1A3 318 aa11.13□□□□□ -0.63
CHMP4BP1-201ENST00000556017 ING4Q9UNL4 249 aa11.13□□□□□ -0.63
CHMP4BP1-201ENST00000556017 RRP9O43818 475 aaKnown RBP11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 SOX15O60248 233 aa11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 FADS2O95864 444 aaKnown RBP11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 SLC2A2P11168 524 aaPredicted RBP11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 RCC1P18754 421 aaPredicted RBP11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 VDAC1P21796 283 aa11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 ZNF93P35789 620 aaPredicted RBP11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 ETV1P50549 477 aa11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 GBX2P52951 348 aaPredicted RBP11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 RPS11P62280 158 aaKnown RBP eCLIP11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 SMN1Q16637 294 aaKnown RBP11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 SYT6Q5T7P8 510 aaPredicted RBP11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 DDI2Q5TDH0 399 aa11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 LINC00596Q86U02 117 aa11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 GPR148Q8TDV2 347 aa11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 CPNE2Q96FN4 548 aaPredicted RBP11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 FGF20Q9NP95 211 aaPredicted RBP11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 TMEM138Q9NPI0 162 aa11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 TPSG1Q9NRR2 321 aa11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 FBXO7Q9Y3I1 522 aa11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 GMPPBQ9Y5P6 360 aa11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 WSB1Q9Y6I7 421 aa11.12□□□□□ -0.63
CHMP4BP1-201ENST00000556017 TRAV8-7A0A075B6U6 113 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 IGHV7-81A0A0B4J1V7 117 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 TRBV5-5A0A0J9YX44 114 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 AIPO00170 330 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 ATP6V0E1O15342 81 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 MAGEB3O15480 346 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 OGG1O15527 345 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 TXNL1O43396 289 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 LANCL1O43813 399 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 WBP4O75554 376 aaKnown RBP11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 GPX5O75715 221 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 HBZP02008 142 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 NDPQ00604 133 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 GNMTQ14749 295 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 SLC22A6Q4U2R8 563 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 ATAD3CQ5T2N8 411 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 OR2G6Q5TZ20 316 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 SIGIRRQ6IA17 410 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 MINDY2Q8NBR6 621 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 228.9 ms