RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, human

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-222	ENST00000555617	PROP1	O75360	226 aa		7.72	□□□□□ -1.17
ABCD4-222	ENST00000555617	NPY1R	P25929	384 aa		7.72	□□□□□ -1.17
ABCD4-222	ENST00000555617	IFNA8	P32881	189 aa		7.72	□□□□□ -1.17
ABCD4-222	ENST00000555617	RPS6KA3	P51812	740 aa		7.72	□□□□□ -1.17
ABCD4-222	ENST00000555617	SLC18A1	P54219	525 aa		7.72	□□□□□ -1.17
ABCD4-222	ENST00000555617	CDC42	P60953	191 aa		7.72	□□□□□ -1.17
ABCD4-222	ENST00000555617		Q6P435	159 aa		7.72	□□□□□ -1.17
ABCD4-222	ENST00000555617	FAM58A	Q8N1B3	248 aa		7.72	□□□□□ -1.17
ABCD4-222	ENST00000555617	THRSP	Q92748	146 aa		7.72	□□□□□ -1.17
ABCD4-222	ENST00000555617	USMG5	Q96IX5	58 aa		7.72	□□□□□ -1.17
ABCD4-222	ENST00000555617	AKIP1	Q9NQ31	210 aa		7.72	□□□□□ -1.17
ABCD4-222	ENST00000555617	CLEC5A	Q9NY25	188 aa		7.72	□□□□□ -1.17
ABCD4-222	ENST00000555617	UTP11	Q9Y3A2	253 aa	Known RBP	7.72	□□□□□ -1.17
ABCD4-222	ENST00000555617		A0A087WUV0	522 aa	Predicted RBP	7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	MEIKIN	A0A087WXM9	373 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	FAM230A	A0A1W2PPH8	454 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	HSPB6	O14558	160 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	FFAR1	O14842	300 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	TXNL1	O43396	289 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	IGLV3-1	P01715	115 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	PRH1	P02810	166 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	SEMG1	P04279	462 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	VIM	P08670	466 aa	Known RBP	7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	APELA	P0DMC3	54 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	RIPPLY1	Q0D2K3	151 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	SLC22A6	Q4U2R8	563 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	ZNF585B	Q52M93	769 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	TTC32	Q5I0X7	151 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	TMEM69	Q5SWH9	247 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	LCN1P1	Q5VSP4	162 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	MSANTD1	Q6ZTZ1	278 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	NECAP1	Q8NC96	275 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	PROKR2	Q8NFJ6	384 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	POLR2J2	Q9GZM3	115 aa	Known RBP	7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	C6orf62	Q9GZU0	229 aa	Predicted RBP	7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	POLR2J3	Q9H1A7	115 aa	Known RBP	7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	INTS9	Q9NV88	658 aa	Known RBP	7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	GSTK1	Q9Y2Q3	226 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	SNX13	Q9Y5W8	968 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	CDH10	Q9Y6N8	788 aa		7.71	□□□□□ -1.18
ABCD4-222	ENST00000555617	TRBV2	A0A0J9YWF9	115 aa		7.7	□□□□□ -1.18
ABCD4-222	ENST00000555617	ZNF320	A2RRD8	509 aa		7.7	□□□□□ -1.18
ABCD4-222	ENST00000555617	SDHD	O14521	159 aa		7.7	□□□□□ -1.18
ABCD4-222	ENST00000555617	CLU	P10909	449 aa		7.7	□□□□□ -1.18
ABCD4-222	ENST00000555617	SCN1B	Q07699	218 aa		7.7	□□□□□ -1.18
ABCD4-222	ENST00000555617	ST3GAL3	Q11203	375 aa		7.7	□□□□□ -1.18
ABCD4-222	ENST00000555617	CT45A1	Q5HYN5	189 aa		7.7	□□□□□ -1.18
ABCD4-222	ENST00000555617	ZNF562	Q6V9R5	426 aa		7.7	□□□□□ -1.18
ABCD4-222	ENST00000555617		Q6ZSA8	131 aa		7.7	□□□□□ -1.18
ABCD4-222	ENST00000555617	MBOAT2	Q6ZWT7	520 aa		7.7	□□□□□ -1.18
ABCD4-222	ENST00000555617	C11orf65	Q8NCR3	313 aa		7.7	□□□□□ -1.18
ABCD4-222	ENST00000555617	CT45A3	Q8NHU0	189 aa		7.7	□□□□□ -1.18
ABCD4-222	ENST00000555617	RSRC1	Q96IZ7	334 aa	Known RBP	7.7	□□□□□ -1.18
ABCD4-222	ENST00000555617	TEAD3	Q99594	435 aa		7.7	□□□□□ -1.18
ABCD4-222	ENST00000555617	EXOSC4	Q9NPD3	245 aa	Known RBP	7.7	□□□□□ -1.18
ABCD4-222	ENST00000555617	GMEB1	Q9Y692	573 aa		7.7	□□□□□ -1.18
ABCD4-222	ENST00000555617	RS1	O15537	224 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	RIPK2	O43353	540 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	CSTB	P04080	98 aa	Known RBP	7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	GYPB	P06028	91 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	IL3RA	P26951	378 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	PLGLA	Q15195	96 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	USF2	Q15853	346 aa	Predicted RBP	7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	PAGE3	Q5JUK9	113 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	TEX30	Q5JUR7	227 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	GPHB5	Q86YW7	130 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	ENTHD1	Q8IYW4	607 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	C8orf31	Q8N9H6	132 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	CSNK1G2-AS1	Q8NCQ2	148 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	OR51T1	Q8NGJ9	327 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	PLPPR1	Q8TBJ4	325 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	OR51E1	Q8TCB6	317 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	PRRC1	Q96M27	445 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	C5orf66	Q9H5L9	145 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	GORASP2	Q9H8Y8	452 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	GPR84	Q9NQS5	396 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	GFOD1	Q9NXC2	390 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	COA4	Q9NYJ1	87 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	TAS2R1	Q9NYW7	299 aa		7.69	□□□□□ -1.18
ABCD4-222	ENST00000555617	C15orf65	H3BRN8	121 aa		7.68	□□□□□ -1.18
ABCD4-222	ENST00000555617	COPE	O14579	308 aa		7.68	□□□□□ -1.18
ABCD4-222	ENST00000555617	LANCL1	O43813	399 aa		7.68	□□□□□ -1.18
ABCD4-222	ENST00000555617	GGCT	O75223	188 aa	Known RBP	7.68	□□□□□ -1.18
ABCD4-222	ENST00000555617	APOC1	P02654	83 aa		7.68	□□□□□ -1.18
ABCD4-222	ENST00000555617	PPIB	P23284	216 aa	Known RBP	7.68	□□□□□ -1.18
ABCD4-222	ENST00000555617	POLR2J	P52435	117 aa	Known RBP	7.68	□□□□□ -1.18
ABCD4-222	ENST00000555617	CRISP1	P54107	249 aa		7.68	□□□□□ -1.18
ABCD4-222	ENST00000555617	PSMA6	P60900	246 aa	Known RBP	7.68	□□□□□ -1.18
ABCD4-222	ENST00000555617	RHOG	P84095	191 aa		7.68	□□□□□ -1.18
ABCD4-222	ENST00000555617	FXYD3	Q14802	87 aa		7.68	□□□□□ -1.18
ABCD4-222	ENST00000555617	SPIN3	Q5JUX0	258 aa		7.68	□□□□□ -1.18
ABCD4-222	ENST00000555617	CLVS2	Q5SYC1	327 aa		7.68	□□□□□ -1.18
ABCD4-222	ENST00000555617	SLC35F1	Q5T1Q4	408 aa		7.68	□□□□□ -1.18
ABCD4-222	ENST00000555617	ZNF730	Q6ZMV8	503 aa		7.68	□□□□□ -1.18
ABCD4-222	ENST00000555617	SSX7	Q7RTT5	188 aa		7.68	□□□□□ -1.18
ABCD4-222	ENST00000555617	OR10A7	Q8NGE5	316 aa		7.68	□□□□□ -1.18
ABCD4-222	ENST00000555617	C10orf35	Q96D05	121 aa		7.68	□□□□□ -1.18
ABCD4-222	ENST00000555617	TSPYL1	Q9H0U9	437 aa		7.68	□□□□□ -1.18
ABCD4-222	ENST00000555617	KRT84	Q9NSB2	600 aa		7.68	□□□□□ -1.18
ABCD4-222	ENST00000555617	SDCBP	O00560	298 aa	Predicted RBP	7.67	□□□□□ -1.18

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