RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 CLDND2Q8NHS1 167 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 C18orf12Q96KH6 178 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 ZNF488Q96MN9 340 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 NMES1Q9C002 83 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 METTL9Q9H1A3 318 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 GSX1Q9H4S2 264 aaPredicted RBP8.26□□□□□ -1.09
PSEN1-213ENST00000555386 PCDHB16Q9NRJ7 776 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 RNF7Q9UBF6 113 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 HSF4Q9ULV5 492 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 PCDHB10Q9UN67 800 aa8.26□□□□□ -1.09
PSEN1-213ENST00000555386 ANK3Q12955 4377 aaKnown RBP8.25□□□□□ -1.09
PSEN1-213ENST00000555386 MTORP42345 2549 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 SVEP1Q4LDE5 3571 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 PPIAL4EA0A075B759 164 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 A0A1W2PP11 408 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 OR5B21A6NL26 309 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 TMEM210A6NLX4 147 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 PPIAL4DF5H284 164 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 RHBDL1O75783 438 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 SFT2D2O95562 160 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 NMBP08949 121 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 PPIAL4FP0DN26 164 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 EGR1P18146 543 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 M6PRP20645 277 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 ACOT7LQ6ZUV0 252 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 C1QL2Q7Z5L3 287 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 C11orf53Q8IXP5 236 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 C1orf87Q8N0U7 546 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 OR5AP2Q8NGF4 316 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 OR5T2Q8NGG2 359 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 OR5D18Q8NGL1 313 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 THAP6Q8TBB0 222 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 MARCH1Q8TCQ1 289 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 EMG1Q92979 244 aaKnown RBP8.25□□□□□ -1.09
PSEN1-213ENST00000555386 RBPMSQ93062 196 aaKnown RBP8.25□□□□□ -1.09
PSEN1-213ENST00000555386 MRPS24Q96EL2 167 aaKnown RBP8.25□□□□□ -1.09
PSEN1-213ENST00000555386 PHYHIPLQ96FC7 376 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 BORCS8Q96FH0 119 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 Q96M66 194 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 SLC25A32Q9H2D1 315 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 RAB18Q9NP72 206 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 IL36GQ9NZH8 169 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 NUP50Q9UKX7 468 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 PPIAL4AQ9Y536 164 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 SESN1Q9Y6P5 492 aa8.25□□□□□ -1.09
PSEN1-213ENST00000555386 TRBV6-7A0A0A0MS04 114 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 KANTRA0A1W2PQU2 76 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 PQLC2LA1A4F0 135 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 I3L521 148 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 BCL2L11O43521 198 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 IGHV2-70P01814 119 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 GYPAP02724 150 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 TFF1P04155 84 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 AKR1C4P17516 323 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 SERPINA2P20848 420 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 DTYMKP23919 212 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 GATA4P43694 442 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 RBP2P50120 134 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 SNU13P55769 128 aaKnown RBP8.24□□□□□ -1.09
PSEN1-213ENST00000555386 MTCP1P56278 107 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 BAMBIQ13145 260 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 TMEM249Q2WGJ8 235 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 CHRFAM7AQ494W8 412 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 ZNF660Q6AZW8 331 aaPredicted RBP8.24□□□□□ -1.09
PSEN1-213ENST00000555386 WDR82Q6UXN9 313 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 OVCH2Q7RTZ1 564 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 CALHM1Q8IU99 346 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 ADAD2Q8NCV1 583 aaKnown RBP8.24□□□□□ -1.09
PSEN1-213ENST00000555386 PXT1Q8NFP0 134 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 COQ8AQ8NI60 647 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 PPP1R1CQ8WVI7 109 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 ERGIC1Q969X5 290 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 WDR13Q9H1Z4 485 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 PPA2Q9H2U2 334 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 OR51I2Q9H344 312 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 C5orf66Q9H5L9 145 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 RDH8Q9NYR8 311 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 DNAJB11Q9UBS4 358 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 PFDN2Q9UHV9 154 aa8.24□□□□□ -1.09
PSEN1-213ENST00000555386 IGKV1-27A0A075B6S5 117 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 A0A096LNT2 108 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 MFSD2BA6NFX1 497 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 IFNL4K9M1U5 179 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 SYNGR1O43759 233 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 CRYZL1O95825 349 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 LY6G6DO95868 133 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 CSTBP04080 98 aaKnown RBP8.23□□□□□ -1.09
PSEN1-213ENST00000555386 TMEM225BP0DP42 221 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 PSMB6P28072 239 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 MDH2P40926 338 aaKnown RBP8.23□□□□□ -1.09
PSEN1-213ENST00000555386 FUT6P51993 359 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 ATP1B3P54709 279 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 LOXL1Q08397 574 aaPredicted RBP8.23□□□□□ -1.09
PSEN1-213ENST00000555386 RSU1Q15404 277 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 LYPD2Q6UXB3 125 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 CLEC9AQ6UXN8 241 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 ZNF573Q86YE8 665 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 PDZD9Q8IXQ8 264 aa8.23□□□□□ -1.09
PSEN1-213ENST00000555386 EIF4E3Q8N5X7 224 aaKnown RBP8.23□□□□□ -1.09
PSEN1-213ENST00000555386 GCSAMQ8N6F7 178 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms