RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 ZP1P60852 638 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 FABP5Q01469 135 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 BDH1Q02338 343 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 MXD1Q05195 221 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 ACSM1Q08AH1 577 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 MLLT11Q13015 90 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-231ENST00000554994 TPBGQ13641 420 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 ZNF273Q14593 569 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 ODF1Q14990 250 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 ZNF146Q15072 292 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 RAB11BQ15907 218 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 SSX2Q16385 188 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 CT83Q5H943 113 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 PRAMEF5Q5TYX0 476 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 RNLSQ5VYX0 342 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 NCR3LG1Q68D85 454 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 C22orf42Q6IC83 251 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 OR10K2Q6IF99 312 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 RAB12Q6IQ22 244 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 Q6P435 159 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 UNQ9370/PRO34162Q6UXP9 181 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 C17orf107Q6ZR85 190 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 ZNF367Q7RTV3 350 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 SPARTQ8N0X7 666 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 PRR18Q8N4B5 295 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 Q8N7P7 452 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 CHST4Q8NCG5 386 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 PXT1Q8NFP0 134 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 OR13D1Q8NGV5 346 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 OR4K15Q8NH41 348 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 NDNFQ8TB73 568 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 MRGPRDQ8TDS7 321 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 THRSPQ92748 146 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 ZNF48Q96MX3 618 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-231ENST00000554994 ZNF714Q96N38 554 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 NEDD4LQ96PU5 975 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 GPHA2Q96T91 129 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 SSX3Q99909 188 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 FAAP24Q9BTP7 215 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 DPCDQ9BVM2 203 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-231ENST00000554994 PPIL3Q9H2H8 161 aaKnown RBP3.78□□□□□ -1.8
ATXN3-231ENST00000554994 KCNK15Q9H427 330 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 RHOFQ9HBH0 211 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 CHMP1AQ9HD42 196 aaPredicted RBP3.78□□□□□ -1.8
ATXN3-231ENST00000554994 ISYNA1Q9NPH2 558 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 KIF25Q9UIL4 384 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 TRAPPC2LQ9UL33 140 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 SSR3Q9UNL2 185 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 LSM2Q9Y333 95 aaKnown RBP3.78□□□□□ -1.8
ATXN3-231ENST00000554994 HILPDAQ9Y5L2 63 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 COX11Q9Y6N1 276 aa3.78□□□□□ -1.8
ATXN3-231ENST00000554994 IGHV3-43A0A0B4J1X8 118 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 TRAV24A0A0B4J272 114 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 A0A1W2PPE3 182 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 ODAMA1E959 279 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 DNAJC9-AS1A6NH13 148 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 H3BUI4 141 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 CCRL2O00421 344 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 ZNF737O75373 536 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 GPX5O75715 221 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 IGHV4-59P01825 116 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 FBP1P09467 338 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 CLEC2LP0C7M8 214 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 IGHV1-8P0DP01 117 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 IGHV3-43DP0DP04 118 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 MMP9P14780 707 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 ARSBP15848 533 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 FUT3P21217 361 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 CDK2P24941 298 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 PSMA1P25786 263 aaKnown RBP3.77□□□□□ -1.81
ATXN3-231ENST00000554994 BLVRBP30043 206 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-231ENST00000554994 GABRA5P31644 462 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 SAA4P35542 130 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 VEGFCP49767 419 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 GNG10P50151 68 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 PSMD7P51665 324 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 UBE2E1P51965 193 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 P2RX3P56373 397 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 RBM11P57052 281 aaKnown RBP3.77□□□□□ -1.81
ATXN3-231ENST00000554994 BPIFB3P59826 476 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 KRTAP10-3P60369 221 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 GABARAPL2P60520 117 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 LSM3P62310 102 aaKnown RBP3.77□□□□□ -1.81
ATXN3-231ENST00000554994 MRPS15P82914 257 aaKnown RBP3.77□□□□□ -1.81
ATXN3-231ENST00000554994 MEF2CQ06413 473 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-231ENST00000554994 SLC9A3R2Q15599 337 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 C2orf76Q3KRA6 126 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 KPRPQ5T749 579 aaPredicted RBP3.77□□□□□ -1.81
ATXN3-231ENST00000554994 ELP2Q6IA86 826 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 ASPHD2Q6ICH7 369 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 OR52W1Q6IF63 320 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 ZNF529Q6P280 563 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 C16orf87Q6PH81 154 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 ZNF773Q6PK81 442 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 BAIAP2L2Q6UXY1 529 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 ASCL4Q6XD76 172 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 Q6YL49 198 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 TMEM91Q6ZNR0 172 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 C1orf122Q6ZSJ8 110 aa3.77□□□□□ -1.81
ATXN3-231ENST00000554994 LRRTM1Q86UE6 522 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms