RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 DEFB133Q30KQ1 61 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 PHLDA2Q53GA4 152 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 Q6ZS52 159 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 SHISA6Q6ZSJ9 500 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 BTF3L4Q96K17 158 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 SLC2A9Q9NRM0 540 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 RPRMQ9NS64 109 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 LAMA1P25391 3075 aa13.49□□□□□ -0.25
SYNE3-203ENST00000554873 RTTNQ86VV8 2226 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 BRWD1Q9NSI6 2320 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 FBXW4P57775 412 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 MRPS34P82930 218 aaKnown RBP13.48□□□□□ -0.25
SYNE3-203ENST00000554873 ODF3L1Q8IXM7 274 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 HSPB9Q9BQS6 159 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 NKX2-6A6NCS4 301 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 NPIPB13A6NJU9 1138 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 SHISA7A6NL88 538 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 NPIPB4C9JG80 1138 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 H3BML4 177 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 PHF1O43189 567 aaPredicted RBP13.48□□□□□ -0.25
SYNE3-203ENST00000554873 S100A7P31151 101 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 FGF8P55075 233 aaPredicted RBP13.48□□□□□ -0.25
SYNE3-203ENST00000554873 SUMF1Q8NBK3 374 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 OR5D18Q8NGL1 313 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 ST8SIA1Q92185 356 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 WDYHV1Q96HA8 205 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 PGAM5Q96HS1 289 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 ABHD14BQ96IU4 210 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 TUBG2Q9NRH3 451 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 MCTS1Q9ULC4 181 aaKnown RBP13.48□□□□□ -0.25
SYNE3-203ENST00000554873 LHFPL6Q9Y693 200 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 FER1L5A0AVI2 2057 aa13.48□□□□□ -0.25
SYNE3-203ENST00000554873 COL5A1P20908 1838 aaPredicted RBP13.47□□□□□ -0.25
SYNE3-203ENST00000554873 IGHV2OR16-5A0A0B4J2B6 119 aa13.47□□□□□ -0.25
SYNE3-203ENST00000554873 F6UZH7 168 aa13.47□□□□□ -0.25
SYNE3-203ENST00000554873 IL3RAP26951 378 aa13.47□□□□□ -0.25
SYNE3-203ENST00000554873 HNRNPA3P51991 378 aaKnown RBP13.47□□□□□ -0.25
SYNE3-203ENST00000554873 C17orf82Q86X59 251 aaPredicted RBP13.47□□□□□ -0.25
SYNE3-203ENST00000554873 ZNF709Q8N972 641 aa13.47□□□□□ -0.25
SYNE3-203ENST00000554873 THAP3Q8WTV1 239 aaPredicted RBP13.47□□□□□ -0.25
SYNE3-203ENST00000554873 DDIT4LQ96D03 193 aa13.47□□□□□ -0.25
SYNE3-203ENST00000554873 NXT1Q9UKK6 140 aaKnown RBP13.47□□□□□ -0.25
SYNE3-203ENST00000554873 EFNA2O43921 213 aa13.47□□□□□ -0.25
SYNE3-203ENST00000554873 COMPP49747 757 aaPredicted RBP13.47□□□□□ -0.25
SYNE3-203ENST00000554873 ACSF3Q4G176 576 aaPredicted RBP13.47□□□□□ -0.25
SYNE3-203ENST00000554873 ABHD12BQ7Z5M8 362 aaPredicted RBP13.47□□□□□ -0.25
SYNE3-203ENST00000554873 COMMD2Q86X83 199 aa13.47□□□□□ -0.25
SYNE3-203ENST00000554873 SLC38A9Q8NBW4 561 aa13.47□□□□□ -0.25
SYNE3-203ENST00000554873 REPIN1Q9BWE0 567 aaKnown RBP13.47□□□□□ -0.25
SYNE3-203ENST00000554873 MRPL13Q9BYD1 178 aaKnown RBP13.47□□□□□ -0.25
SYNE3-203ENST00000554873 NECAP2Q9NVZ3 263 aa13.47□□□□□ -0.25
SYNE3-203ENST00000554873 KLHL13Q9P2N7 655 aa13.47□□□□□ -0.25
SYNE3-203ENST00000554873 LIPT2A6NK58 231 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 IFNA5P01569 189 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 ZNF17P17021 662 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 CTRLP40313 264 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 ARL4DP49703 201 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 ZNF154Q13106 437 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 MFAP5Q13361 173 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 ZNF726P1Q15940 193 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 DMRTC1Q5HYR2 192 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 CALHM1Q8IU99 346 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 APH1AQ96BI3 265 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 RPUSD4Q96CM3 377 aaKnown RBP13.46□□□□□ -0.25
SYNE3-203ENST00000554873 TXN2Q99757 166 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 SPIN2AQ99865 258 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 SPIN2BQ9BPZ2 258 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 ST3GAL6Q9Y274 331 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 DUXBA0A1W2PPF3 345 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 MMP23AO75900 390 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 PDGFBP01127 241 aaPredicted RBP13.46□□□□□ -0.25
SYNE3-203ENST00000554873 ESDP10768 282 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 BMP5P22003 454 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 AADACP22760 399 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 CDAP32320 146 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 OR1D5P58170 312 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 FXYD4P59646 89 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 C17orf67Q0P5P2 114 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 UNQ5815/PRO19632Q6UWF5 114 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 Q6ZN92 141 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 OR5AU1Q8NGC0 362 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 OR8B12Q8NGG6 310 aa13.46□□□□□ -0.25
SYNE3-203ENST00000554873 OR6C6A6NF89 314 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 C16orf54Q6UWD8 224 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 MEX3BQ6ZN04 569 aaKnown RBP13.45□□□□□ -0.26
SYNE3-203ENST00000554873 TMPRSS7Q7RTY8 843 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 FAM71F1Q96KD3 344 aaPredicted RBP13.45□□□□□ -0.26
SYNE3-203ENST00000554873 TRAV30A0A087WSZ9 112 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 A0A0U1RQK1 487 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 ZNF320A2RRD8 509 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 ZNF850A8MQ14 1090 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 TMEM250H0YL14 139 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 ZNF737O75373 536 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 SUMO1P63165 101 aaKnown RBP13.45□□□□□ -0.26
SYNE3-203ENST00000554873 MEF2BQ02080 365 aaPredicted RBP13.45□□□□□ -0.26
SYNE3-203ENST00000554873 CFHR1Q03591 330 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 EXT1Q16394 746 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 SPATA45Q537H7 98 aa13.45□□□□□ -0.26
SYNE3-203ENST00000554873 OCIAD2Q56VL3 154 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms