RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 EDDM3BP56851 147 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 ADARB1P78563 741 aaKnown RBP3.33□□□□□ -1.88
VTI1B-203ENST00000554636 EDDM3AQ14507 147 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 CDK5R1Q15078 307 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 RCN1Q15293 331 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 GRK1Q15835 563 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 AANATQ16613 207 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 SPIN3Q5JUX0 258 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 OR2G6Q5TZ20 316 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 DHRS7BQ6IAN0 325 aaPredicted RBP3.33□□□□□ -1.88
VTI1B-203ENST00000554636 LAIR2Q6ISS4 152 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 Q6P435 159 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 BAIAP2L2Q6UXY1 529 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 GDPD3Q7L5L3 318 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 LHFPL4Q7Z7J7 247 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 ZNF329Q86UD4 541 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 EGFL6Q8IUX8 553 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 SAXO1Q8IYX7 474 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 DYNAPQ8N1N2 210 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 PARP16Q8N5Y8 322 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 PACRGLQ8N7B6 248 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 ZNF676Q8N7Q3 588 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 TPRX1Q8N7U7 411 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 ASCC1Q8N9N2 400 aaKnown RBP3.33□□□□□ -1.88
VTI1B-203ENST00000554636 ZNF485Q8NCK3 441 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 ZNF555Q8NEP9 628 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 OR11H6Q8NGC7 330 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 OR5D18Q8NGL1 313 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 OR13C5Q8NGS8 318 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 OR5R1Q8NH85 324 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 LINC01006Q8NI28 216 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 PIFOQ8TCI5 191 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 STMN2Q93045 179 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 MRPL48Q96GC5 212 aaKnown RBP3.33□□□□□ -1.88
VTI1B-203ENST00000554636 COQ2Q96H96 371 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 PGLYRP3Q96LB9 341 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 Q96MT0 163 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 ZNF714Q96N38 554 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 MYCBPQ99417 103 aaPredicted RBP3.33□□□□□ -1.88
VTI1B-203ENST00000554636 NKX3-1Q99801 234 aaPredicted RBP3.33□□□□□ -1.88
VTI1B-203ENST00000554636 SSX3Q99909 188 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 CHST6Q9GZX3 395 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 C16orf95Q9H693 158 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 RANBP3Q9H6Z4 567 aaPredicted RBP3.33□□□□□ -1.88
VTI1B-203ENST00000554636 BEX1Q9HBH7 125 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 HMG20AQ9NP66 347 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 EXOSC4Q9NPD3 245 aaKnown RBP3.33□□□□□ -1.88
VTI1B-203ENST00000554636 C8orf4Q9NR00 106 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 TAS2R4Q9NYW5 299 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 CLEC2DQ9UHP7 191 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 GSTK1Q9Y2Q3 226 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 FAM96BQ9Y3D0 163 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 RPL36Q9Y3U8 105 aaKnown RBP3.33□□□□□ -1.88
VTI1B-203ENST00000554636 TBL2Q9Y4P3 447 aaKnown RBP3.33□□□□□ -1.88
VTI1B-203ENST00000554636 LINC00312Q9Y6C7 94 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 SESN1Q9Y6P5 492 aa3.33□□□□□ -1.88
VTI1B-203ENST00000554636 DNAH9Q9NYC9 4486 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 PKD1L1Q8TDX9 2849 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 IGLV5-52A0A0A0MRZ9 124 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 IGHV2-26A0A0B4J1V2 119 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 TRAV24A0A0B4J272 114 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 TRBV5-5A0A0J9YX44 114 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 hADV38S2A0JD32 116 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 IRGMA1A4Y4 181 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 MAGEA13PA6NCF6 341 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 A6NDX4 124 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 VGLL3A8MV65 326 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 SLC33A1O00400 549 aaPredicted RBP3.32□□□□□ -1.88
VTI1B-203ENST00000554636 OGG1O15527 345 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 MMP23AO75900 390 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 OR2H2O95918 312 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 CYB5AP00167 134 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 IGKV3-20P01619 116 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 ARG1P05089 322 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 CSN2P05814 226 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 HCKP08631 526 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 IGFBP3P17936 291 aaPredicted RBP3.32□□□□□ -1.88
VTI1B-203ENST00000554636 RAB3AP20336 220 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 GABRR1P24046 479 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 DCKP27707 260 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 CD34P28906 385 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 TGFBR2P37173 567 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 GPR12P47775 334 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 OR3A4PP47883 348 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 EFNB2P52799 333 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 RPS11P62280 158 aaKnown RBP eCLIP3.32□□□□□ -1.88
VTI1B-203ENST00000554636 MEF2CQ06413 473 aaPredicted RBP3.32□□□□□ -1.88
VTI1B-203ENST00000554636 KISS1Q15726 138 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 LY6EQ16553 131 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 LRRC36Q1X8D7 754 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 C17orf58Q2M2W7 97 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 CCDC58Q4VC31 144 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 UTF1Q5T230 341 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 OGFRL1Q5TC84 451 aaPredicted RBP3.32□□□□□ -1.88
VTI1B-203ENST00000554636 PRAMEF5Q5TYX0 476 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 TTC23Q5W5X9 447 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 DMKNQ6E0U4 476 aaPredicted RBP3.32□□□□□ -1.88
VTI1B-203ENST00000554636 ELP2Q6IA86 826 aa3.32□□□□□ -1.88
VTI1B-203ENST00000554636 RPL22L1Q6P5R6 122 aaKnown RBP3.32□□□□□ -1.88
VTI1B-203ENST00000554636 CCBE1Q6UXH8 406 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms