RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 J3QR06 171 aa18.78■□□□□ 0.6
NEK9-203ENST00000553945 SDCBPO00560 298 aaPredicted RBP18.78■□□□□ 0.6
NEK9-203ENST00000553945 LDLRAD4O15165 306 aa18.78■□□□□ 0.6
NEK9-203ENST00000553945 SPINT2O43291 252 aa18.78■□□□□ 0.6
NEK9-203ENST00000553945 MDKP21741 143 aaPredicted RBP18.78■□□□□ 0.6
NEK9-203ENST00000553945 VEGFCP49767 419 aa18.78■□□□□ 0.6
NEK9-203ENST00000553945 PLA2G7Q13093 441 aa18.78■□□□□ 0.6
NEK9-203ENST00000553945 TRAT1Q6PIZ9 186 aa18.78■□□□□ 0.6
NEK9-203ENST00000553945 SLC16A12Q6ZSM3 486 aa18.78■□□□□ 0.6
NEK9-203ENST00000553945 NR2C2APQ86WQ0 139 aa18.78■□□□□ 0.6
NEK9-203ENST00000553945 PRR18Q8N4B5 295 aa18.78■□□□□ 0.6
NEK9-203ENST00000553945 FAM89BQ8N5H3 189 aa18.78■□□□□ 0.6
NEK9-203ENST00000553945 OR4F5Q8NH21 305 aa18.78■□□□□ 0.6
NEK9-203ENST00000553945 CREB3L1Q96BA8 519 aa18.78■□□□□ 0.6
NEK9-203ENST00000553945 MMP28Q9H239 520 aa18.78■□□□□ 0.6
NEK9-203ENST00000553945 LIN7BQ9HAP6 207 aa18.78■□□□□ 0.6
NEK9-203ENST00000553945 RAB9BQ9NP90 201 aa18.78■□□□□ 0.6
NEK9-203ENST00000553945 RAB22AQ9UL26 194 aa18.78■□□□□ 0.6
NEK9-203ENST00000553945 A0A0B4J203 849 aa18.77■□□□□ 0.6
NEK9-203ENST00000553945 NDUFA7O95182 113 aa18.77■□□□□ 0.6
NEK9-203ENST00000553945 SLC2A2P11168 524 aaPredicted RBP18.77■□□□□ 0.6
NEK9-203ENST00000553945 CFPP27918 469 aa18.77■□□□□ 0.6
NEK9-203ENST00000553945 CEACAM3P40198 252 aa18.77■□□□□ 0.6
NEK9-203ENST00000553945 TPRA1Q86W33 373 aa18.77■□□□□ 0.6
NEK9-203ENST00000553945 OR52M1Q8NGK5 317 aa18.77■□□□□ 0.6
NEK9-203ENST00000553945 RNF167Q9H6Y7 350 aa18.77■□□□□ 0.6
NEK9-203ENST00000553945 CHMP1AQ9HD42 196 aaPredicted RBP18.77■□□□□ 0.6
NEK9-203ENST00000553945 KCNIP1Q9NZI2 227 aa18.77■□□□□ 0.6
NEK9-203ENST00000553945 AMMECR1Q9Y4X0 333 aaPredicted RBP18.77■□□□□ 0.6
NEK9-203ENST00000553945 IGHV3-43A0A0B4J1X8 118 aa18.76■□□□□ 0.59
NEK9-203ENST00000553945 NOTOA8MTQ0 251 aa18.76■□□□□ 0.59
NEK9-203ENST00000553945 F2RL2O00254 374 aa18.76■□□□□ 0.59
NEK9-203ENST00000553945 HBZP02008 142 aa18.76■□□□□ 0.59
NEK9-203ENST00000553945 IGHV3-43DP0DP04 118 aa18.76■□□□□ 0.59
NEK9-203ENST00000553945 TPTE2P1Q5T6R2 138 aa18.76■□□□□ 0.59
NEK9-203ENST00000553945 OR56B1Q8NGI3 324 aa18.76■□□□□ 0.59
NEK9-203ENST00000553945 OR1L1Q8NH94 360 aa18.76■□□□□ 0.59
NEK9-203ENST00000553945 TAF9BQ9HBM6 251 aa18.76■□□□□ 0.59
NEK9-203ENST00000553945 MBNL3Q9NUK0 354 aaKnown RBP18.76■□□□□ 0.59
NEK9-203ENST00000553945 A0A1W2PPE3 182 aa18.75■□□□□ 0.59
NEK9-203ENST00000553945 SDC2P34741 201 aa18.75■□□□□ 0.59
NEK9-203ENST00000553945 EFNB2P52799 333 aa18.75■□□□□ 0.59
NEK9-203ENST00000553945 MXD1Q05195 221 aa18.75■□□□□ 0.59
NEK9-203ENST00000553945 FAM53AQ6NSI3 398 aaPredicted RBP18.75■□□□□ 0.59
NEK9-203ENST00000553945 ARHGAP5-AS1Q96IT6 56 aa18.75■□□□□ 0.59
NEK9-203ENST00000553945 CENPOQ9BU64 300 aa18.75■□□□□ 0.59
NEK9-203ENST00000553945 BEX1Q9HBH7 125 aa18.75■□□□□ 0.59
NEK9-203ENST00000553945 GFOD1Q9NXC2 390 aa18.75■□□□□ 0.59
NEK9-203ENST00000553945 TCF19Q9Y242 345 aa18.75■□□□□ 0.59
NEK9-203ENST00000553945 FOXI3A8MTJ6 420 aaPredicted RBP18.74■□□□□ 0.59
NEK9-203ENST00000553945 LY6LH3BQJ8 138 aa18.74■□□□□ 0.59
NEK9-203ENST00000553945 HAX1O00165 279 aa18.74■□□□□ 0.59
NEK9-203ENST00000553945 DYNLT3P51808 116 aa18.74■□□□□ 0.59
NEK9-203ENST00000553945 ARHGDIBP52566 201 aa18.74■□□□□ 0.59
NEK9-203ENST00000553945 TMEM50BP56557 158 aa18.74■□□□□ 0.59
NEK9-203ENST00000553945 LOXL3P58215 753 aa18.74■□□□□ 0.59
NEK9-203ENST00000553945 Q6ZTK2 550 aa18.74■□□□□ 0.59
NEK9-203ENST00000553945 C5orf24Q7Z6I8 188 aa18.74■□□□□ 0.59
NEK9-203ENST00000553945 OR10X1Q8NGY0 326 aa18.74■□□□□ 0.59
NEK9-203ENST00000553945 SETD6Q8TBK2 473 aa18.74■□□□□ 0.59
NEK9-203ENST00000553945 RAB18Q9NP72 206 aa18.74■□□□□ 0.59
NEK9-203ENST00000553945 GNG12Q9UBI6 72 aa18.74■□□□□ 0.59
NEK9-203ENST00000553945 AK3Q9UIJ7 227 aa18.74■□□□□ 0.59
NEK9-203ENST00000553945 HSF4Q9ULV5 492 aa18.74■□□□□ 0.59
NEK9-203ENST00000553945 A6NDX4 124 aa18.73■□□□□ 0.59
NEK9-203ENST00000553945 TRIM64CA6NLI5 447 aa18.73■□□□□ 0.59
NEK9-203ENST00000553945 TMEM30BQ3MIR4 351 aa18.73■□□□□ 0.59
NEK9-203ENST00000553945 TIMM50Q3ZCQ8 353 aa18.73■□□□□ 0.59
NEK9-203ENST00000553945 LIAT1Q6ZQX7 453 aa18.73■□□□□ 0.59
NEK9-203ENST00000553945 Q6ZSV7 163 aa18.73■□□□□ 0.59
NEK9-203ENST00000553945 TMEM219Q86XT9 240 aa18.73■□□□□ 0.59
NEK9-203ENST00000553945 OR10V1Q8NGI7 309 aa18.73■□□□□ 0.59
NEK9-203ENST00000553945 TOMM40LQ969M1 308 aa18.73■□□□□ 0.59
NEK9-203ENST00000553945 RPEQ96AT9 228 aa18.73■□□□□ 0.59
NEK9-203ENST00000553945 YIPF6Q96EC8 236 aa18.73■□□□□ 0.59
NEK9-203ENST00000553945 PECRQ9BY49 303 aa18.73■□□□□ 0.59
NEK9-203ENST00000553945 DAPK2Q9UIK4 370 aa18.73■□□□□ 0.59
NEK9-203ENST00000553945 PITPNC1Q9UKF7 332 aa18.73■□□□□ 0.59
NEK9-203ENST00000553945 A0A1B0GUS0 222 aa18.72■□□□□ 0.59
NEK9-203ENST00000553945 POM121CA8CG34 1229 aa18.72■□□□□ 0.59
NEK9-203ENST00000553945 CHST1O43916 411 aa18.72■□□□□ 0.59
NEK9-203ENST00000553945 NAPSAO96009 420 aa18.72■□□□□ 0.59
NEK9-203ENST00000553945 CLEC2LP0C7M8 214 aa18.72■□□□□ 0.59
NEK9-203ENST00000553945 RAB6AP20340 208 aa18.72■□□□□ 0.59
NEK9-203ENST00000553945 BRS3P32247 399 aa18.72■□□□□ 0.59
NEK9-203ENST00000553945 MADCAM1Q13477 382 aa18.72■□□□□ 0.59
NEK9-203ENST00000553945 CCDC144NLQ6NUI1 221 aa18.72■□□□□ 0.59
NEK9-203ENST00000553945 CCBE1Q6UXH8 406 aaPredicted RBP18.72■□□□□ 0.59
NEK9-203ENST00000553945 ZNF554Q86TJ5 538 aa18.72■□□□□ 0.59
NEK9-203ENST00000553945 HDHD3Q9BSH5 251 aaPredicted RBP18.72■□□□□ 0.59
NEK9-203ENST00000553945 MMP24Q9Y5R2 645 aa18.72■□□□□ 0.59
NEK9-203ENST00000553945 CLPSL1A2RUU4 121 aa18.71■□□□□ 0.59
NEK9-203ENST00000553945 OOSP1A8MZH6 123 aa18.71■□□□□ 0.59
NEK9-203ENST00000553945 AIREO43918 545 aa18.71■□□□□ 0.59
NEK9-203ENST00000553945 CD24P25063 80 aa18.71■□□□□ 0.59
NEK9-203ENST00000553945 MNDAP41218 407 aa18.71■□□□□ 0.59
NEK9-203ENST00000553945 MOGAT2Q3SYC2 334 aa18.71■□□□□ 0.59
NEK9-203ENST00000553945 PLAC9Q5JTB6 97 aa18.71■□□□□ 0.59
NEK9-203ENST00000553945 OLFML2AQ68BL7 652 aa18.71■□□□□ 0.59
NEK9-203ENST00000553945 SFXN4Q6P4A7 337 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms