RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 NANOGP8Q6NSW7 305 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 OPN5Q6U736 354 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 SSX7Q7RTT5 188 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 CYP4Z1Q86W10 505 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 CRLF3Q8IUI8 442 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 IQCF2Q8IXL9 164 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 PGAM4Q8N0Y7 254 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 OR51Q1Q8NH59 317 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 OR5W2Q8NH69 310 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 SFXN5Q8TD22 340 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 PPWD1Q96BP3 646 aaKnown RBP1.97□□□□□ -2.09
SCFD1-210ENST00000553693 CCDC127Q96BQ5 260 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 SNF8Q96H20 258 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 ADTRPQ96IZ2 230 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 WFIKKN1Q96NZ8 548 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 RNF157Q96PX1 679 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 ALS2CR12Q96Q35 445 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 OR2A5Q96R48 311 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 KLF6Q99612 283 aaPredicted RBP1.97□□□□□ -2.09
SCFD1-210ENST00000553693 APOL4Q9BPW4 351 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 TBL1YQ9BQ87 522 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 SFXN3Q9BWM7 321 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 OR52A5Q9H2C5 316 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 SLC38A1Q9H2H9 487 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 C1orf198Q9H425 327 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 ABCB9Q9NP78 766 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 NLE1Q9NVX2 485 aaPredicted RBP1.97□□□□□ -2.09
SCFD1-210ENST00000553693 RHBDL2Q9NX52 303 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 STOML2Q9UJZ1 356 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 YTHDF2Q9Y5A9 579 aaKnown RBP1.97□□□□□ -2.09
SCFD1-210ENST00000553693 ORC6Q9Y5N6 252 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 TMEM14AQ9Y6G1 99 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 PRRC2CQ9Y520 2896 aaKnown RBP1.97□□□□□ -2.09
SCFD1-210ENST00000553693 DOCK9Q9BZ29 2069 aa1.97□□□□□ -2.09
SCFD1-210ENST00000553693 PCM1Q15154 2024 aa1.96□□□□□ -2.09
SCFD1-210ENST00000553693 MTORP42345 2549 aa1.96□□□□□ -2.09
SCFD1-210ENST00000553693 SCN8AQ9UQD0 1980 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 A0A0A6YYD5 115 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 TRAV8-6A0A0B4J262 113 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 A0A0B4J2E0 115 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 IGHV5-10-1A0A0J9YXX1 117 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 CENPBD1B2RD01 187 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 F8VZ95 297 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 MKRN2OSH3BPM6 223 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 M0R1X1 148 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 DNASE2O00115 360 aaPredicted RBP1.96□□□□□ -2.1
SCFD1-210ENST00000553693 TNFRSF11BO00300 401 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 SULT1C2O00338 296 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 UBDO15205 165 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 ZMPSTE24O75844 475 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 SCO1O75880 301 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 MT-ND4P03905 459 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 THRAP10827 490 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 NQO2P16083 231 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 F8A1P23610 371 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 PSMB9P28065 219 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 PSMB5P28074 263 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 GNRHRP30968 328 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 PRSS3P35030 304 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 MLF1P58340 268 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 CRADDP78560 199 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 IL5RAQ01344 420 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 OR4D1Q15615 310 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 TRIP13Q15645 432 aaPredicted RBP1.96□□□□□ -2.1
SCFD1-210ENST00000553693 TNXAQ16473 311 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 RSPO1Q2MKA7 263 aaPredicted RBP1.96□□□□□ -2.1
SCFD1-210ENST00000553693 YIF1BQ5BJH7 314 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 FBXW9Q5XUX1 488 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 KCTD16Q68DU8 428 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 SPOPLQ6IQ16 392 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 SPNS3Q6ZMD2 512 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 WDFY1Q8IWB7 410 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 TMEM256Q8N2U0 113 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 ATPAF2Q8N5M1 289 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 C11orf72Q8NBR9 251 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 OR4M2Q8NGB6 313 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 ENKURQ8TC29 256 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 NELFBQ8WX92 580 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 C22orf15Q8WYQ4 148 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 GTF2H4Q92759 462 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 FLYWCH2Q96CP2 140 aaKnown RBP1.96□□□□□ -2.1
SCFD1-210ENST00000553693 MRPL48Q96GC5 212 aaKnown RBP1.96□□□□□ -2.1
SCFD1-210ENST00000553693 C8orf76Q96K31 380 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 TMEM243Q9BU79 118 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 TMED9Q9BVK6 235 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 MRPL20Q9BYC9 149 aaKnown RBP1.96□□□□□ -2.1
SCFD1-210ENST00000553693 TBL1XR1Q9BZK7 514 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 ULBP1Q9BZM6 244 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 DSN1Q9H410 356 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 RDH14Q9HBH5 336 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 ACOT13Q9NPJ3 140 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 OR2S2Q9NQN1 319 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 SDHAF3Q9NRP4 125 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 TMEM100Q9NV29 134 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 ZNRD1Q9P1U0 126 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 ZNF222Q9UK12 451 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 SIGLEC9Q9Y336 463 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 WIF1Q9Y5W5 379 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 ENPP4Q9Y6X5 453 aa1.96□□□□□ -2.1
SCFD1-210ENST00000553693 RP1P56715 2156 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms