RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 OR9A4Q8NGU2 314 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 OR1S1Q8NH92 325 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 RNASEH2CQ8TDP1 164 aaKnown RBP3.92□□□□□ -1.78
ATXN3-218ENST00000553309 FCGR1BQ92637 280 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 FAM46BQ96A09 425 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 RPUSD4Q96CM3 377 aaKnown RBP3.92□□□□□ -1.78
ATXN3-218ENST00000553309 ASB9Q96DX5 294 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 CENPNQ96H22 339 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-218ENST00000553309 CDKN2AIPNLQ96HQ2 116 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 SLC6A7Q99884 636 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 SULT4A1Q9BR01 284 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 CHRNA10Q9GZZ6 450 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 MTHFD2LQ9H903 347 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-218ENST00000553309 MED20Q9H944 212 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 WFDC1Q9HC57 220 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 GPN1Q9HCN4 374 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-218ENST00000553309 PLEKHJ1Q9NW61 149 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 RBFOX1Q9NWB1 397 aaKnown RBP3.92□□□□□ -1.78
ATXN3-218ENST00000553309 TAS2R13Q9NYV9 303 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 ZNF629Q9UEG4 869 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-218ENST00000553309 C19orf25Q9UFG5 118 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-218ENST00000553309 CRLS1Q9UJA2 301 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 FBXW2Q9UKT8 454 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 PDE10AQ9Y233 779 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 RASD1Q9Y272 281 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 HEBP2Q9Y5Z4 205 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 EML6Q6ZMW3 1958 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 ALPK2Q86TB3 2170 aa3.92□□□□□ -1.78
ATXN3-218ENST00000553309 TRAV30A0A087WSZ9 112 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 MEIKINA0A087WXM9 373 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 TRGV5A0A0B4J1U4 118 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 TRBV2A0A0J9YWF9 115 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 C7orf66A4D0T2 115 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 OR5H14A6NHG9 310 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 INMT-MINDY4F8WBC2 141 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 FAAHO00519 579 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 SOCS3O14543 225 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 CCL25O15444 150 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 ZNF208O43345 1280 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 PROSCO94903 275 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 LSM8O95777 96 aaKnown RBP3.91□□□□□ -1.78
ATXN3-218ENST00000553309 CST4P01036 141 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 HLA-DQB1P01920 261 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 SOD3P08294 240 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 OR8U9P0C7N5 309 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 GKN3PP0CG01 181 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 ZBTB25P24278 435 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 HTR2AP28223 471 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 HTR2CP28335 458 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 GLP1RP43220 463 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 RFX3P48380 749 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 CSNK1A1P48729 337 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 HCCSP53701 268 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 CRISP1P54107 249 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 BIDP55957 195 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 RAB8AP61006 207 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 HBA1P69905 142 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 CYCSP99999 105 aaKnown RBP3.91□□□□□ -1.78
ATXN3-218ENST00000553309 LOXL1Q08397 574 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-218ENST00000553309 OR5I1Q13606 314 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 KIAA0141Q14154 515 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-218ENST00000553309 EXT1Q16394 746 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 SGCBQ16585 318 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 KCTD19Q17RG1 926 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-218ENST00000553309 PLPPR5Q32ZL2 321 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 TCTEX1D4Q5JR98 221 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 SPIN3Q5JUX0 258 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 TMEM244Q5VVB8 128 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 RAET1LQ5VY80 246 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 OR2A2Q6IF42 318 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 FAM45BPQ6NSW5 357 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 DRAM2Q6UX65 266 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 FBXW12Q6X9E4 464 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 C5orf24Q7Z6I8 188 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 RNF130Q86XS8 419 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 CBLN2Q8IUK8 224 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 ZNF664Q8N3J9 261 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 FADS6Q8N9I5 356 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 PROKR2Q8NFJ6 384 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 OR10D4PQ8NGN7 298 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 OR13C4Q8NGS5 318 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 OR5AK3PQ8NH89 298 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 RHEBL1Q8TAI7 183 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 M1APQ8TC57 530 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 GNPDA2Q8TDQ7 276 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 TFB1MQ8WVM0 346 aaKnown RBP3.91□□□□□ -1.78
ATXN3-218ENST00000553309 TSLPQ969D9 159 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 HIST1H2BAQ96A08 127 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 TMEM45BQ96B21 275 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 ROPN1LQ96C74 230 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 TP53RKQ96S44 253 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 LYSMD1Q96S90 227 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 PCDHB18PQ96TA0 734 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 C1QTNF6Q9BXI9 259 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 SEC11CQ9BY50 192 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 SPANXA1Q9NS26 97 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 ZNF226Q9NYT6 803 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 ONECUT1Q9UBC0 465 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 VPS29Q9UBQ0 182 aa3.91□□□□□ -1.78
ATXN3-218ENST00000553309 RNF150Q9ULK6 438 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms