RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 A0A1W2PPE3 182 aa10.32□□□□□ -0.76
ACTN1-207ENST00000553290 HSD17B6O14756 317 aa10.32□□□□□ -0.76
ACTN1-207ENST00000553290 SC5DO75845 299 aa10.32□□□□□ -0.76
ACTN1-207ENST00000553290 GAPDHP04406 335 aaKnown RBP10.32□□□□□ -0.76
ACTN1-207ENST00000553290 MYF6P23409 242 aa10.32□□□□□ -0.76
ACTN1-207ENST00000553290 IL3RAP26951 378 aa10.32□□□□□ -0.76
ACTN1-207ENST00000553290 LOXL3P58215 753 aa10.32□□□□□ -0.76
ACTN1-207ENST00000553290 CD83Q01151 205 aa10.32□□□□□ -0.76
ACTN1-207ENST00000553290 DIAPH2-AS1Q14236 149 aa10.32□□□□□ -0.76
ACTN1-207ENST00000553290 HES1Q14469 280 aa10.32□□□□□ -0.76
ACTN1-207ENST00000553290 INSL4Q14641 139 aa10.32□□□□□ -0.76
ACTN1-207ENST00000553290 IRF3Q14653 427 aa10.32□□□□□ -0.76
ACTN1-207ENST00000553290 FBLN7Q53RD9 439 aa10.32□□□□□ -0.76
ACTN1-207ENST00000553290 C9orf152Q5JTZ5 239 aa10.32□□□□□ -0.76
ACTN1-207ENST00000553290 RBM48Q5RL73 367 aaKnown RBP10.32□□□□□ -0.76
ACTN1-207ENST00000553290 SYT6Q5T7P8 510 aaPredicted RBP10.32□□□□□ -0.76
ACTN1-207ENST00000553290 GAPTQ8N292 157 aa10.32□□□□□ -0.76
ACTN1-207ENST00000553290 R3HDM4Q96D70 268 aa10.32□□□□□ -0.76
ACTN1-207ENST00000553290 ANKRD60Q9BZ19 345 aa10.32□□□□□ -0.76
ACTN1-207ENST00000553290 DUSP21Q9H596 190 aa10.32□□□□□ -0.76
ACTN1-207ENST00000553290 PLXNB1O43157 2135 aa10.31□□□□□ -0.76
ACTN1-207ENST00000553290 ADARB2-AS1A8MUL3 147 aa10.31□□□□□ -0.76
ACTN1-207ENST00000553290 C12orf77C9JDV5 145 aa10.31□□□□□ -0.76
ACTN1-207ENST00000553290 CCRL2O00421 344 aa10.31□□□□□ -0.76
ACTN1-207ENST00000553290 FGF16O43320 207 aa10.31□□□□□ -0.76
ACTN1-207ENST00000553290 PDCD6O75340 191 aa10.31□□□□□ -0.76
ACTN1-207ENST00000553290 TMEM11P17152 192 aa10.31□□□□□ -0.76
ACTN1-207ENST00000553290 SRMP19623 302 aa10.31□□□□□ -0.76
ACTN1-207ENST00000553290 GP2P55259 537 aaKnown RBP10.31□□□□□ -0.76
ACTN1-207ENST00000553290 HSD17B12Q53GQ0 312 aa10.31□□□□□ -0.76
ACTN1-207ENST00000553290 C1orf100Q5SVJ3 147 aa10.31□□□□□ -0.76
ACTN1-207ENST00000553290 FAM27D1Q5T7N8 215 aa10.31□□□□□ -0.76
ACTN1-207ENST00000553290 SIGIRRQ6IA17 410 aa10.31□□□□□ -0.76
ACTN1-207ENST00000553290 CEACAM19Q7Z692 300 aa10.31□□□□□ -0.76
ACTN1-207ENST00000553290 MOB3BQ86TA1 216 aa10.31□□□□□ -0.76
ACTN1-207ENST00000553290 ZNF554Q86TJ5 538 aa10.31□□□□□ -0.76
ACTN1-207ENST00000553290 LRRTM1Q86UE6 522 aa10.31□□□□□ -0.76
ACTN1-207ENST00000553290 OR4K15Q8NH41 348 aa10.31□□□□□ -0.76
ACTN1-207ENST00000553290 UBALD1Q8TB05 177 aa10.31□□□□□ -0.76
ACTN1-207ENST00000553290 UFD1Q92890 307 aa10.31□□□□□ -0.76
ACTN1-207ENST00000553290 FAM46BQ96A09 425 aa10.31□□□□□ -0.76
ACTN1-207ENST00000553290 IGHV3-43A0A0B4J1X8 118 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 IGHV1-3A0A0C4DH29 117 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 RGS10O43665 173 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 MPIG6BO95866 241 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 IGKV1D-33P01593 117 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 IGKV1-33P01594 117 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 HBZP02008 142 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 UCHL1P09936 223 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 IGHV3-43DP0DP04 118 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 VHLP40337 213 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 HSPA13P48723 471 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 TPBGQ13641 420 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 EBI3Q14213 229 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 HNF4GQ14541 408 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 TRAM1Q15629 374 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 LIPKQ5VXJ0 399 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 C1QL4Q86Z23 238 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 C5orf56Q8N8D9 126 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 OR4X2Q8NGF9 303 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 KCNG3Q8TAE7 436 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 SGCDQ92629 289 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 NEDD4LQ96PU5 975 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 ISYNA1Q9NPH2 558 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 MBNL3Q9NUK0 354 aaKnown RBP10.3□□□□□ -0.76
ACTN1-207ENST00000553290 KCNIP1Q9NZI2 227 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 GNG12Q9UBI6 72 aa10.3□□□□□ -0.76
ACTN1-207ENST00000553290 TCRBV4S1A1TA0A5B7 111 aa10.29□□□□□ -0.76
ACTN1-207ENST00000553290 UBE2QL1A1L167 161 aa10.29□□□□□ -0.76
ACTN1-207ENST00000553290 SH2D7A6NKC9 451 aaPredicted RBP10.29□□□□□ -0.76
ACTN1-207ENST00000553290 TXNL1O43396 289 aa10.29□□□□□ -0.76
ACTN1-207ENST00000553290 VSIG8P0DPA2 414 aa10.29□□□□□ -0.76
ACTN1-207ENST00000553290 CD37P11049 281 aa10.29□□□□□ -0.76
ACTN1-207ENST00000553290 RCC1P18754 421 aaPredicted RBP10.29□□□□□ -0.76
ACTN1-207ENST00000553290 PSMA1P25786 263 aaKnown RBP10.29□□□□□ -0.76
ACTN1-207ENST00000553290 HTR2CP28335 458 aa10.29□□□□□ -0.76
ACTN1-207ENST00000553290 CD1BP29016 333 aa10.29□□□□□ -0.76
ACTN1-207ENST00000553290 RPS27AP62979 156 aaKnown RBP10.29□□□□□ -0.76
ACTN1-207ENST00000553290 SAMD5Q5TGI4 173 aa10.29□□□□□ -0.76
ACTN1-207ENST00000553290 STEAP3Q658P3 488 aa10.29□□□□□ -0.76
ACTN1-207ENST00000553290 SLC25A48Q6ZT89 311 aaKnown RBP10.29□□□□□ -0.76
ACTN1-207ENST00000553290 PRSS48Q7RTY5 328 aa10.29□□□□□ -0.76
ACTN1-207ENST00000553290 IZUMO1Q8IYV9 350 aa10.29□□□□□ -0.76
ACTN1-207ENST00000553290 PRR18Q8N4B5 295 aa10.29□□□□□ -0.76
ACTN1-207ENST00000553290 ZNF439Q8NDP4 499 aa10.29□□□□□ -0.76
ACTN1-207ENST00000553290 RTN4IP1Q8WWV3 396 aaPredicted RBP10.29□□□□□ -0.76
ACTN1-207ENST00000553290 ST6GALNAC6Q969X2 333 aa10.29□□□□□ -0.76
ACTN1-207ENST00000553290 TMEM59Q9BXS4 323 aa10.29□□□□□ -0.76
ACTN1-207ENST00000553290 CCDC90BQ9GZT6 254 aa10.29□□□□□ -0.76
ACTN1-207ENST00000553290 TAF9BQ9HBM6 251 aa10.29□□□□□ -0.76
ACTN1-207ENST00000553290 TSSC4Q9Y5U2 329 aaPredicted RBP10.29□□□□□ -0.76
ACTN1-207ENST00000553290 G3V4G9 280 aa10.28□□□□□ -0.76
ACTN1-207ENST00000553290 SLC22A1O15245 554 aa10.28□□□□□ -0.76
ACTN1-207ENST00000553290 HSMCR30P0CW71 290 aa10.28□□□□□ -0.76
ACTN1-207ENST00000553290 CRHBPP24387 322 aa10.28□□□□□ -0.76
ACTN1-207ENST00000553290 CHATP28329 748 aa10.28□□□□□ -0.76
ACTN1-207ENST00000553290 REG1BP48304 166 aa10.28□□□□□ -0.76
ACTN1-207ENST00000553290 ZNF137PP52743 207 aa10.28□□□□□ -0.76
ACTN1-207ENST00000553290 MLLT11Q13015 90 aaPredicted RBP10.28□□□□□ -0.76
ACTN1-207ENST00000553290 BEAN1Q3B7T3 259 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms