RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 HSPA12AO43301 675 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 CD8AP01732 235 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 HEXAP06865 529 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 DANCRP0C864 163 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 IGKV1-13P0DP09 117 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 SELLP14151 372 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 HLA-GP17693 338 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 IL2RGP31785 369 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 GZMKP49863 264 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 NKX2-5P52952 324 aaPredicted RBP10.57□□□□□ -0.72
CACNB3-223ENST00000552480 RAP2BP61225 183 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 HFEQ30201 348 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 FAM216BQ8N7L0 139 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 OR5M8Q8NGP6 311 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 SECTM1Q8WVN6 248 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 C14orf79Q96F83 325 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 CHIAQ9BZP6 476 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 SLC5A7Q9GZV3 580 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 TOLLIPQ9H0E2 274 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 RAB1BQ9H0U4 201 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 RANBP3Q9H6Z4 567 aaPredicted RBP10.57□□□□□ -0.72
CACNB3-223ENST00000552480 SLC2A9Q9NRM0 540 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 PIPOXQ9P0Z9 390 aa10.57□□□□□ -0.72
CACNB3-223ENST00000552480 COL6A6A6NMZ7 2263 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 A0A1B0GW55 424 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 A6NNC1 897 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 SMLR1H3BR10 107 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 C15orf65H3BRN8 121 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 TNFRSF13BO14836 293 aaPredicted RBP10.56□□□□□ -0.72
CACNB3-223ENST00000552480 SIX6O95475 246 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 FSTL3O95633 263 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 DUX4L2P0CJ85 424 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 DUX4L3P0CJ86 424 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 DUX4L4P0CJ87 422 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 DUX4L5P0CJ88 424 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 DUX4L6P0CJ89 424 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 DUX4L7P0CJ90 424 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 GZMHP20718 246 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 GNRHRP30968 328 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 LUMP51884 338 aaPredicted RBP10.56□□□□□ -0.72
CACNB3-223ENST00000552480 EDDM3BP56851 147 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 H2BFSP57053 126 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 SRSF4Q08170 494 aaKnown RBP10.56□□□□□ -0.72
CACNB3-223ENST00000552480 KCNJ8Q15842 424 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 ANKRD55Q3KP44 614 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 PHLDA2Q53GA4 152 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 LY6G6FQ5SQ64 297 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 LIN54Q6MZP7 749 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 DUX4L9Q6RFH8 374 aaPredicted RBP10.56□□□□□ -0.72
CACNB3-223ENST00000552480 MEX3BQ6ZN04 569 aaKnown RBP10.56□□□□□ -0.72
CACNB3-223ENST00000552480 KCTD9Q7L273 389 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 OR10V1Q8NGI7 309 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 UBALD1Q8TB05 177 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 RTN4IP1Q8WWV3 396 aaPredicted RBP10.56□□□□□ -0.72
CACNB3-223ENST00000552480 ARL11Q969Q4 196 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 GALNT14Q96FL9 552 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 SUCNR1Q9BXA5 334 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 RDH8Q9NYR8 311 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 OR6C3Q9NZP0 311 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 DUX4Q9UBX2 424 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 KCNIP3Q9Y2W7 256 aa10.56□□□□□ -0.72
CACNB3-223ENST00000552480 KLF2Q9Y5W3 355 aaPredicted RBP10.56□□□□□ -0.72
CACNB3-223ENST00000552480 USP24Q9UPU5 2620 aa10.55□□□□□ -0.72
CACNB3-223ENST00000552480 A0A1W2PPR1 153 aa10.55□□□□□ -0.72
CACNB3-223ENST00000552480 NDUFA2O43678 99 aa10.55□□□□□ -0.72
CACNB3-223ENST00000552480 SOD3P08294 240 aa10.55□□□□□ -0.72
CACNB3-223ENST00000552480 SSTR5P35346 364 aa10.55□□□□□ -0.72
CACNB3-223ENST00000552480 CEACAM6P40199 344 aa10.55□□□□□ -0.72
CACNB3-223ENST00000552480 HTD2P86397 168 aa10.55□□□□□ -0.72
CACNB3-223ENST00000552480 DCAF12L2Q5VW00 463 aa10.55□□□□□ -0.72
CACNB3-223ENST00000552480 ZNF818PQ6ZRF7 136 aa10.55□□□□□ -0.72
CACNB3-223ENST00000552480 LDLRAD3Q86YD5 345 aa10.55□□□□□ -0.72
CACNB3-223ENST00000552480 DRAXINQ8NBI3 349 aaPredicted RBP10.55□□□□□ -0.72
CACNB3-223ENST00000552480 OR2T35Q8NGX2 323 aa10.55□□□□□ -0.72
CACNB3-223ENST00000552480 NEU4Q8WWR8 484 aaPredicted RBP10.55□□□□□ -0.72
CACNB3-223ENST00000552480 NINJ1Q92982 152 aa10.55□□□□□ -0.72
CACNB3-223ENST00000552480 HYLS1Q96M11 299 aa10.55□□□□□ -0.72
CACNB3-223ENST00000552480 DCTN5Q9BTE1 182 aa10.55□□□□□ -0.72
CACNB3-223ENST00000552480 RAB18Q9NP72 206 aa10.55□□□□□ -0.72
CACNB3-223ENST00000552480 RAB9BQ9NP90 201 aa10.55□□□□□ -0.72
CACNB3-223ENST00000552480 CCL28Q9NRJ3 127 aa10.55□□□□□ -0.72
CACNB3-223ENST00000552480 KAAG1Q9UBP8 84 aa10.55□□□□□ -0.72
CACNB3-223ENST00000552480 CCSO14618 274 aa10.54□□□□□ -0.72
CACNB3-223ENST00000552480 HSD17B6O14756 317 aa10.54□□□□□ -0.72
CACNB3-223ENST00000552480 TMPRSS2O15393 492 aa10.54□□□□□ -0.72
CACNB3-223ENST00000552480 MPPED1O15442 326 aa10.54□□□□□ -0.72
CACNB3-223ENST00000552480 RGS11O94810 467 aa10.54□□□□□ -0.72
CACNB3-223ENST00000552480 CGB3P0DN86 165 aa10.54□□□□□ -0.72
CACNB3-223ENST00000552480 CGB7P0DN87 165 aa10.54□□□□□ -0.72
CACNB3-223ENST00000552480 DNASE1P24855 282 aa10.54□□□□□ -0.72
CACNB3-223ENST00000552480 COL8A2P25067 703 aa10.54□□□□□ -0.72
CACNB3-223ENST00000552480 S100GP29377 79 aa10.54□□□□□ -0.72
CACNB3-223ENST00000552480 MRPS11P82912 194 aaKnown RBP10.54□□□□□ -0.72
CACNB3-223ENST00000552480 TMEM187Q14656 261 aa10.54□□□□□ -0.72
CACNB3-223ENST00000552480 CMTM1Q8IZ96 169 aa10.54□□□□□ -0.72
CACNB3-223ENST00000552480 BVESQ8NE79 360 aa10.54□□□□□ -0.72
CACNB3-223ENST00000552480 NBEAQ8NFP9 2946 aa10.54□□□□□ -0.72
CACNB3-223ENST00000552480 OR52L2PQ8NGH6 319 aa10.54□□□□□ -0.72
CACNB3-223ENST00000552480 CORO2AQ92828 525 aa10.54□□□□□ -0.72
CACNB3-223ENST00000552480 UBTD1Q9HAC8 227 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms