RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 CCDC107Q8WV48 283 aa16.99■□□□□ 0.31
SMARCC2-210ENST00000550519 APH1BQ8WW43 257 aa16.99■□□□□ 0.31
SMARCC2-210ENST00000550519 FGF20Q9NP95 211 aaPredicted RBP16.99■□□□□ 0.31
SMARCC2-210ENST00000550519 LOC100130705A0A1B0GUX0 176 aa16.98■□□□□ 0.31
SMARCC2-210ENST00000550519 ZNF780AO75290 641 aaPredicted RBP16.98■□□□□ 0.31
SMARCC2-210ENST00000550519 IGHG4P01861 327 aa16.98■□□□□ 0.31
SMARCC2-210ENST00000550519 BDKRB2P30411 391 aa16.98■□□□□ 0.31
SMARCC2-210ENST00000550519 ZNF137PP52743 207 aa16.98■□□□□ 0.31
SMARCC2-210ENST00000550519 PPP3R1P63098 170 aa16.98■□□□□ 0.31
SMARCC2-210ENST00000550519 C9orf66Q5T8R8 295 aa16.98■□□□□ 0.31
SMARCC2-210ENST00000550519 ZNF439Q8NDP4 499 aa16.98■□□□□ 0.31
SMARCC2-210ENST00000550519 S100A13Q99584 98 aa16.98■□□□□ 0.31
SMARCC2-210ENST00000550519 SLC29A1Q99808 456 aa16.98■□□□□ 0.31
SMARCC2-210ENST00000550519 RASL11BQ9BPW5 248 aa16.98■□□□□ 0.31
SMARCC2-210ENST00000550519 HSPB9Q9BQS6 159 aa16.98■□□□□ 0.31
SMARCC2-210ENST00000550519 A0A1W2PP11 408 aa16.97■□□□□ 0.31
SMARCC2-210ENST00000550519 SLC31A2O15432 143 aa16.97■□□□□ 0.31
SMARCC2-210ENST00000550519 RRP9O43818 475 aaKnown RBP16.97■□□□□ 0.31
SMARCC2-210ENST00000550519 VHLP40337 213 aa16.97■□□□□ 0.31
SMARCC2-210ENST00000550519 SLC25A48Q6ZT89 311 aaKnown RBP16.97■□□□□ 0.31
SMARCC2-210ENST00000550519 NEK7Q8TDX7 302 aa16.97■□□□□ 0.31
SMARCC2-210ENST00000550519 ORAI1Q96D31 301 aa16.97■□□□□ 0.31
SMARCC2-210ENST00000550519 C9orf16Q9BUW7 83 aa16.97■□□□□ 0.31
SMARCC2-210ENST00000550519 SCOCQ9UIL1 159 aa16.97■□□□□ 0.31
SMARCC2-210ENST00000550519 SIRT4Q9Y6E7 314 aaPredicted RBP16.97■□□□□ 0.31
SMARCC2-210ENST00000550519 U3KQK5 164 aa16.97■□□□□ 0.31
SMARCC2-210ENST00000550519 AIPO00170 330 aa16.96■□□□□ 0.31
SMARCC2-210ENST00000550519 OGG1O15527 345 aa16.96■□□□□ 0.31
SMARCC2-210ENST00000550519 TXNL1O43396 289 aa16.96■□□□□ 0.31
SMARCC2-210ENST00000550519 GTF2F2P13984 249 aa16.96■□□□□ 0.31
SMARCC2-210ENST00000550519 IGFBP3P17936 291 aaPredicted RBP16.96■□□□□ 0.31
SMARCC2-210ENST00000550519 ETV1P50549 477 aa16.96■□□□□ 0.31
SMARCC2-210ENST00000550519 ZNF134P52741 427 aa16.96■□□□□ 0.31
SMARCC2-210ENST00000550519 F2RL1P55085 397 aa16.96■□□□□ 0.31
SMARCC2-210ENST00000550519 SLC22A6Q4U2R8 563 aa16.96■□□□□ 0.31
SMARCC2-210ENST00000550519 NKAPLQ5M9Q1 402 aa16.96■□□□□ 0.31
SMARCC2-210ENST00000550519 C4orf3Q8WVX3 66 aa16.96■□□□□ 0.31
SMARCC2-210ENST00000550519 RBMXL1Q96E39 390 aaKnown RBP16.96■□□□□ 0.31
SMARCC2-210ENST00000550519 PRR25Q96S07 402 aa16.96■□□□□ 0.31
SMARCC2-210ENST00000550519 RCC2Q9P258 522 aaKnown RBP16.96■□□□□ 0.31
SMARCC2-210ENST00000550519 ZNF580Q9UK33 172 aa16.96■□□□□ 0.31
SMARCC2-210ENST00000550519 STAB2Q8WWQ8 2551 aa16.96■□□□□ 0.31
SMARCC2-210ENST00000550519 C12orf77C9JDV5 145 aa16.95■□□□□ 0.3
SMARCC2-210ENST00000550519 IGF1P05019 195 aa16.95■□□□□ 0.3
SMARCC2-210ENST00000550519 VDAC1P21796 283 aa16.95■□□□□ 0.3
SMARCC2-210ENST00000550519 PSMB8P28062 276 aa16.95■□□□□ 0.3
SMARCC2-210ENST00000550519 SOX6P35712 828 aa16.95■□□□□ 0.3
SMARCC2-210ENST00000550519 RIPK1Q13546 671 aa16.95■□□□□ 0.3
SMARCC2-210ENST00000550519 FHL3Q13643 280 aa16.95■□□□□ 0.3
SMARCC2-210ENST00000550519 SMN1Q16637 294 aaKnown RBP16.95■□□□□ 0.3
SMARCC2-210ENST00000550519 CT45A1Q5HYN5 189 aa16.95■□□□□ 0.3
SMARCC2-210ENST00000550519 OR2G6Q5TZ20 316 aa16.95■□□□□ 0.3
SMARCC2-210ENST00000550519 STX19Q8N4C7 294 aa16.95■□□□□ 0.3
SMARCC2-210ENST00000550519 CT45A3Q8NHU0 189 aa16.95■□□□□ 0.3
SMARCC2-210ENST00000550519 SMIM19Q96E16 107 aa16.95■□□□□ 0.3
SMARCC2-210ENST00000550519 ZNF184Q99676 751 aaPredicted RBP16.95■□□□□ 0.3
SMARCC2-210ENST00000550519 SEC14L6B5MCN3 397 aa16.94■□□□□ 0.3
SMARCC2-210ENST00000550519 WBP4O75554 376 aaKnown RBP16.94■□□□□ 0.3
SMARCC2-210ENST00000550519 GPX5O75715 221 aa16.94■□□□□ 0.3
SMARCC2-210ENST00000550519 DCKP27707 260 aa16.94■□□□□ 0.3
SMARCC2-210ENST00000550519 GPR176Q14439 515 aa16.94■□□□□ 0.3
SMARCC2-210ENST00000550519 TMEM30BQ3MIR4 351 aa16.94■□□□□ 0.3
SMARCC2-210ENST00000550519 SYT6Q5T7P8 510 aaPredicted RBP16.94■□□□□ 0.3
SMARCC2-210ENST00000550519 TMPRSS11AQ6ZMR5 421 aa16.94■□□□□ 0.3
SMARCC2-210ENST00000550519 GAPTQ8N292 157 aa16.94■□□□□ 0.3
SMARCC2-210ENST00000550519 MYOZ3Q8TDC0 251 aa16.94■□□□□ 0.3
SMARCC2-210ENST00000550519 KCTD7Q96MP8 289 aa16.94■□□□□ 0.3
SMARCC2-210ENST00000550519 SPACA1Q9HBV2 294 aa16.94■□□□□ 0.3
SMARCC2-210ENST00000550519 BABAM2Q9NXR7 383 aa16.94■□□□□ 0.3
SMARCC2-210ENST00000550519 GNG12Q9UBI6 72 aa16.94■□□□□ 0.3
SMARCC2-210ENST00000550519 TRAPPC2LQ9UL33 140 aa16.94■□□□□ 0.3
SMARCC2-210ENST00000550519 TRBV5-5A0A0J9YX44 114 aa16.93■□□□□ 0.3
SMARCC2-210ENST00000550519 MAGEA13PA6NCF6 341 aa16.93■□□□□ 0.3
SMARCC2-210ENST00000550519 MCRIP1C9JLW8 97 aa16.93■□□□□ 0.3
SMARCC2-210ENST00000550519 SPINT2O43291 252 aa16.93■□□□□ 0.3
SMARCC2-210ENST00000550519 ECI1P42126 302 aa16.93■□□□□ 0.3
SMARCC2-210ENST00000550519 STEAP3Q658P3 488 aa16.93■□□□□ 0.3
SMARCC2-210ENST00000550519 OR13C5Q8NGS8 318 aa16.93■□□□□ 0.3
SMARCC2-210ENST00000550519 MRPS24Q96EL2 167 aaKnown RBP16.93■□□□□ 0.3
SMARCC2-210ENST00000550519 RAB9BQ9NP90 201 aa16.93■□□□□ 0.3
SMARCC2-210ENST00000550519 LALBAP00709 142 aa16.92■□□□□ 0.3
SMARCC2-210ENST00000550519 HBZP02008 142 aa16.92■□□□□ 0.3
SMARCC2-210ENST00000550519 OR5H8P0DN80 308 aa16.92■□□□□ 0.3
SMARCC2-210ENST00000550519 C6orf183Q5T699 404 aa16.92■□□□□ 0.3
SMARCC2-210ENST00000550519 OR10V1Q8NGI7 309 aa16.92■□□□□ 0.3
SMARCC2-210ENST00000550519 OR4K15Q8NH41 348 aa16.92■□□□□ 0.3
SMARCC2-210ENST00000550519 OR1L1Q8NH94 360 aa16.92■□□□□ 0.3
SMARCC2-210ENST00000550519 GHSRQ92847 366 aa16.92■□□□□ 0.3
SMARCC2-210ENST00000550519 CHCHD6Q9BRQ6 235 aa16.92■□□□□ 0.3
SMARCC2-210ENST00000550519 ETAA1Q9NY74 926 aa16.92■□□□□ 0.3
SMARCC2-210ENST00000550519 TRAV8-7A0A075B6U6 113 aa16.91■□□□□ 0.3
SMARCC2-210ENST00000550519 LANCL1O43813 399 aa16.91■□□□□ 0.3
SMARCC2-210ENST00000550519 RPS11P62280 158 aaKnown RBP eCLIP16.91■□□□□ 0.3
SMARCC2-210ENST00000550519 LSAMPQ13449 338 aa16.91■□□□□ 0.3
SMARCC2-210ENST00000550519 KIAA0141Q14154 515 aaPredicted RBP16.91■□□□□ 0.3
SMARCC2-210ENST00000550519 DMKNQ6E0U4 476 aaPredicted RBP16.91■□□□□ 0.3
SMARCC2-210ENST00000550519 OR11H1Q8NG94 326 aa16.91■□□□□ 0.3
SMARCC2-210ENST00000550519 ZNF107Q9UII5 783 aaPredicted RBP16.91■□□□□ 0.3
SMARCC2-210ENST00000550519 RCC1P18754 421 aaPredicted RBP16.9■□□□□ 0.3
SMARCC2-210ENST00000550519 FSTP19883 344 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms