RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 HINT2Q9BX68 163 aa0.9□□□□□ -2.27
CCDC38-206ENST00000548771 IFT46Q9NQC8 304 aa0.9□□□□□ -2.27
CCDC38-206ENST00000548771 TXNL4BQ9NX01 149 aaKnown RBP0.9□□□□□ -2.27
CCDC38-206ENST00000548771 TAS2R13Q9NYV9 303 aa0.9□□□□□ -2.27
CCDC38-206ENST00000548771 OR51B4Q9Y5P0 310 aa0.9□□□□□ -2.27
CCDC38-206ENST00000548771 USH1CQ9Y6N9 552 aa0.9□□□□□ -2.27
CCDC38-206ENST00000548771 YLPM1P49750 1951 aaKnown RBP0.9□□□□□ -2.27
CCDC38-206ENST00000548771 CACNA1SQ13698 1873 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 ADAMTS7Q9UKP4 1686 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 IGKV1-12A0A0C4DH73 117 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 RAB19A4D1S5 217 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 B4DEV8 164 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 H0YC42 278 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 FABP7O15540 132 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 SHOX2O60902 331 aaPredicted RBP0.89□□□□□ -2.27
CCDC38-206ENST00000548771 IGKV1D-12P01611 117 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 GPX1P07203 203 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 CCNOP22674 350 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 PSMA1P25786 263 aaKnown RBP0.89□□□□□ -2.27
CCDC38-206ENST00000548771 PPP1CCP36873 323 aaKnown RBP0.89□□□□□ -2.27
CCDC38-206ENST00000548771 GABARAPL2P60520 117 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 BSPH1Q075Z2 132 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 VAMP3Q15836 100 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 MAPK14Q16539 360 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 FAM162BQ5T6X4 162 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 EBLN2Q6P2I7 272 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 ZBTB8OSQ8IWT0 167 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 SELENOHQ8IZQ5 122 aaKnown RBP0.89□□□□□ -2.27
CCDC38-206ENST00000548771 DEFB119Q8N690 84 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 ZFAND2AQ8N6M9 145 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 OR9I1Q8NGQ6 314 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 OR4X1Q8NH49 305 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 ZNRF2Q8NHG8 242 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 CIDECQ96AQ7 238 aaPredicted RBP0.89□□□□□ -2.27
CCDC38-206ENST00000548771 PGLYRP3Q96LB9 341 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 MBOAT7Q96N66 472 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 NAP1L5Q96NT1 182 aaPredicted RBP0.89□□□□□ -2.27
CCDC38-206ENST00000548771 CATSPER2Q96P56 530 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 PRSS27Q9BQR3 290 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 SCML1Q9UN30 329 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 SLIT2O94813 1529 aa0.89□□□□□ -2.27
CCDC38-206ENST00000548771 USP42Q9H9J4 1324 aaKnown RBP0.89□□□□□ -2.27
CCDC38-206ENST00000548771 ZNF638Q14966 1978 aaKnown RBP0.88□□□□□ -2.27
CCDC38-206ENST00000548771 MUC21A0A0G2JKD1 596 aa0.88□□□□□ -2.27
CCDC38-206ENST00000548771 MUC21A0A140T8X8 626 aa0.88□□□□□ -2.27
CCDC38-206ENST00000548771 CDIPTO14735 213 aa0.88□□□□□ -2.27
CCDC38-206ENST00000548771 ZMPSTE24O75844 475 aa0.88□□□□□ -2.27
CCDC38-206ENST00000548771 SOD1P00441 154 aa0.88□□□□□ -2.27
CCDC38-206ENST00000548771 FBP1P09467 338 aa0.88□□□□□ -2.27
CCDC38-206ENST00000548771 CD36P16671 472 aa0.88□□□□□ -2.27
CCDC38-206ENST00000548771 NUP62P37198 522 aaPredicted RBP0.88□□□□□ -2.27
CCDC38-206ENST00000548771 CD200P41217 278 aa0.88□□□□□ -2.27
CCDC38-206ENST00000548771 CD164Q04900 197 aa0.88□□□□□ -2.27
CCDC38-206ENST00000548771 HES3Q5TGS1 186 aa0.88□□□□□ -2.27
CCDC38-206ENST00000548771 Q6ZT83 130 aa0.88□□□□□ -2.27
CCDC38-206ENST00000548771 TRIML2Q8N7C3 387 aa0.88□□□□□ -2.27
CCDC38-206ENST00000548771 OR11L1Q8NGX0 322 aa0.88□□□□□ -2.27
CCDC38-206ENST00000548771 C16orf78Q8WTQ4 265 aa0.88□□□□□ -2.27
CCDC38-206ENST00000548771 GALMQ96C23 342 aa0.88□□□□□ -2.27
CCDC38-206ENST00000548771 GPR22Q99680 433 aa0.88□□□□□ -2.27
CCDC38-206ENST00000548771 MGLLQ99685 303 aa0.88□□□□□ -2.27
CCDC38-206ENST00000548771 SMDT1Q9H4I9 107 aa0.88□□□□□ -2.27
CCDC38-206ENST00000548771 ARAP3Q8WWN8 1544 aa0.88□□□□□ -2.27
CCDC38-206ENST00000548771 COL18A1P39060 1754 aa0.88□□□□□ -2.27
CCDC38-206ENST00000548771 PXDNLA1KZ92 1463 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 COL4A2P08572 1712 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 A0A0G2JQZ4 141 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 A0A1B0GW15 77 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 C8orf87E5RJ46 101 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 BOLA2-SMG1P6H3BVE0 249 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 J3QLI3 93 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 CDK14O94921 469 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 ATF1P18846 271 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 ALOX5APP20292 161 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 EMP2P54851 167 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 AQP5P55064 265 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 DYNLL1P63167 89 aaKnown RBP0.87□□□□□ -2.27
CCDC38-206ENST00000548771 PAFAH1B3Q15102 231 aaKnown RBP0.87□□□□□ -2.27
CCDC38-206ENST00000548771 PDK2Q15119 407 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 BSXQ3C1V8 233 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 VN1R4Q7Z5H5 301 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 ACBD4Q8NC06 268 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 OR10A6Q8NH74 314 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 SUN5Q8TC36 379 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 LRRC20Q8TCA0 184 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 FAM45AQ8TCE6 357 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 OR5P2Q8WZ92 322 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 MRPS24Q96EL2 167 aaKnown RBP0.87□□□□□ -2.27
CCDC38-206ENST00000548771 GOLPH3Q9H4A6 298 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 XKR8Q9H6D3 395 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 METTL8Q9H825 291 aaKnown RBP0.87□□□□□ -2.27
CCDC38-206ENST00000548771 NDUFB11Q9NX14 153 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 CLEC2DQ9UHP7 191 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 PSMD13Q9UNM6 376 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 RBMX2Q9Y388 322 aaKnown RBP0.87□□□□□ -2.27
CCDC38-206ENST00000548771 FIS1Q9Y3D6 152 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 CHTOPQ9Y3Y2 248 aaKnown RBP0.87□□□□□ -2.27
CCDC38-206ENST00000548771 MTCH2Q9Y6C9 303 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 TRPM6Q9BX84 2022 aa0.87□□□□□ -2.27
CCDC38-206ENST00000548771 ABCB11O95342 1321 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms