RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 RHEBL1Q8TAI7 183 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 STAG3L4Q8TBR4 150 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 ZCCHC13Q8WW36 166 aaKnown RBP1.93□□□□□ -2.1
SNHG1-224ENST00000545688 RAB1CQ92928 201 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 RAB8BQ92930 207 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 C4orf36Q96KX1 117 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 AMDHD1Q96NU7 426 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 TSPAN32Q96QS1 320 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 RNF2Q99496 336 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 FAIM2Q9BWQ8 316 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 KRTAP4-1Q9BYQ7 146 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 ACER3Q9NUN7 267 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 DCAF16Q9NXF7 216 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 GIN1Q9NXP7 522 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 AHSPQ9NZD4 102 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 IFNKQ9P0W0 207 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 OPTCQ9UBM4 332 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 NPTNQ9Y639 398 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 S4R3C0 116 aa1.93□□□□□ -2.1
SNHG1-224ENST00000545688 MUC4Q99102 2169 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 CENPVL3A0A0U1RRI6 287 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 LOC102725191A0A1B0GVB3 256 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 UBXN8O00124 270 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 RGS16O15492 202 aaPredicted RBP1.92□□□□□ -2.1
SNHG1-224ENST00000545688 ZNF208O43345 1280 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 EIF1BO60739 113 aaKnown RBP1.92□□□□□ -2.1
SNHG1-224ENST00000545688 TBX19O60806 448 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 BCAS1O75363 584 aaPredicted RBP1.92□□□□□ -2.1
SNHG1-224ENST00000545688 BANF1O75531 89 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 CCNKO75909 580 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 MFN2O95140 757 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 SNAP29O95721 258 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 IGHV1-46P01743 117 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 KRT14P02533 472 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 GUSBP08236 651 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 IL3P08700 152 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 IMPDH1P20839 514 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 SOX6P35712 828 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 TGFBR2P37173 567 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 MAGEA8P43361 318 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 KIR3DL2P43630 455 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 CAMLGP49069 296 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 RPS23P62266 143 aaKnown RBP1.92□□□□□ -2.1
SNHG1-224ENST00000545688 ZNF816Q0VGE8 651 aaPredicted RBP1.92□□□□□ -2.1
SNHG1-224ENST00000545688 BST1Q10588 318 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 OXA1LQ15070 435 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 ZNF141Q15928 474 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 NDUFAF6Q330K2 333 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 DEFB121Q5J5C9 76 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 TMEM107Q6UX40 140 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 CASP12Q6UXS9 341 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 MDP1Q86V88 176 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 NDUFA11Q86Y39 141 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 C1orf174Q8IYL3 243 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 SYCE1Q8N0S2 351 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 CENPLQ8N0S6 344 aaPredicted RBP1.92□□□□□ -2.1
SNHG1-224ENST00000545688 CDRT4Q8N9R6 151 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 ATP6V1C2Q8NEY4 427 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 OR9K2Q8NGE7 335 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 GPR151Q8TDV0 419 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 C16orf78Q8WTQ4 265 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 NEURL3Q96EH8 262 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 C7orf34Q96L11 122 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 STACQ99469 402 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 GPR22Q99680 433 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 KCNS3Q9BQ31 491 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 EDA2RQ9HAV5 297 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 FARSBQ9NSD9 589 aaKnown RBP1.92□□□□□ -2.1
SNHG1-224ENST00000545688 CHRNA9Q9UGM1 479 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 VPREB3Q9UKI3 123 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 SIGLEC9Q9Y336 463 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 KCNE3Q9Y6H6 103 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 USH1CQ9Y6N9 552 aa1.92□□□□□ -2.1
SNHG1-224ENST00000545688 FAT1Q14517 4588 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 DNAH5Q8TE73 4624 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 TMEM223A0PJW6 202 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 CEACAM18A8MTB9 384 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 ZNF99A8MXY4 864 aaPredicted RBP1.91□□□□□ -2.1
SNHG1-224ENST00000545688 FTCDNL1E5RQL4 147 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 FAAHO00519 579 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 ZNF207O43670 478 aaKnown RBP1.91□□□□□ -2.1
SNHG1-224ENST00000545688 FCN3O75636 299 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 PDYNP01213 254 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 SERPINA5P05154 406 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 RPS17P08708 135 aaKnown RBP1.91□□□□□ -2.1
SNHG1-224ENST00000545688 CD28P10747 220 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 HTR2AP28223 471 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 CFHR2P36980 270 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 GMFBP60983 142 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 UBE2NP61088 152 aaKnown RBP1.91□□□□□ -2.1
SNHG1-224ENST00000545688 FGF12P61328 243 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 SLC35A1P78382 337 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 IFT88Q13099 833 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 SPA17Q15506 151 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 MAPK14Q16539 360 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 VPS26BQ4G0F5 336 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 SPIN3Q5JUX0 258 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 PHYHD1Q5SRE7 291 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 CCNJQ5T5M9 372 aa1.91□□□□□ -2.1
SNHG1-224ENST00000545688 HES5Q5TA89 166 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms