RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 CCRL2O00421 344 aa12.64□□□□□ -0.39
CCDC78-216ENST00000544996 PDCD5O14737 125 aa12.64□□□□□ -0.39
CCDC78-216ENST00000544996 SRSF4Q08170 494 aaKnown RBP12.64□□□□□ -0.39
CCDC78-216ENST00000544996 P2RY14Q15391 338 aa12.64□□□□□ -0.39
CCDC78-216ENST00000544996 TMEM30BQ3MIR4 351 aa12.64□□□□□ -0.39
CCDC78-216ENST00000544996 UBE2UQ5VVX9 321 aa12.64□□□□□ -0.39
CCDC78-216ENST00000544996 OR2W3Q7Z3T1 314 aa12.64□□□□□ -0.39
CCDC78-216ENST00000544996 URM1Q9BTM9 101 aaKnown RBP12.64□□□□□ -0.39
CCDC78-216ENST00000544996 TM2D1Q9BX74 207 aa12.64□□□□□ -0.39
CCDC78-216ENST00000544996 PRSS22Q9GZN4 317 aa12.64□□□□□ -0.39
CCDC78-216ENST00000544996 KCNIP1Q9NZI2 227 aa12.64□□□□□ -0.39
CCDC78-216ENST00000544996 V9GY05 133 aa12.64□□□□□ -0.39
CCDC78-216ENST00000544996 TRDV1A0A1B0GX56 115 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 TMEM14DPA8MWL7 114 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 C12orf77C9JDV5 145 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 TIMM23O14925 209 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 FAM106CPP0CH98 169 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 GALP22466 123 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 MYL9P24844 172 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 CD24P25063 80 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 PSMB9P28065 219 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 CHATP28329 748 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 QRFPP83859 136 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 UNC119Q13432 240 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 Q3ZCU0 254 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 ARSJQ5FYB0 599 aaPredicted RBP12.63□□□□□ -0.39
CCDC78-216ENST00000544996 C16orf82Q7Z2V1 217 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 ZNF554Q86TJ5 538 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 PRR18Q8N4B5 295 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 UBALD1Q8TB05 177 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 GFI1Q99684 422 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 GFOD1Q9NXC2 390 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 GNG12Q9UBI6 72 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 SIGLEC9Q9Y336 463 aa12.63□□□□□ -0.39
CCDC78-216ENST00000544996 TRAV1-2A0A0B4J238 106 aa12.62□□□□□ -0.39
CCDC78-216ENST00000544996 M0QZ24 198 aa12.62□□□□□ -0.39
CCDC78-216ENST00000544996 RCC1P18754 421 aaPredicted RBP12.62□□□□□ -0.39
CCDC78-216ENST00000544996 IL3RAP26951 378 aa12.62□□□□□ -0.39
CCDC78-216ENST00000544996 BLVRBP30043 206 aaPredicted RBP12.62□□□□□ -0.39
CCDC78-216ENST00000544996 RAB7AP51149 207 aa12.62□□□□□ -0.39
CCDC78-216ENST00000544996 EFNB2P52799 333 aa12.62□□□□□ -0.39
CCDC78-216ENST00000544996 LOXL3P58215 753 aa12.62□□□□□ -0.39
CCDC78-216ENST00000544996 KRTAP10-3P60369 221 aa12.62□□□□□ -0.39
CCDC78-216ENST00000544996 CD200R1LQ6Q8B3 271 aa12.62□□□□□ -0.39
CCDC78-216ENST00000544996 C6orf201Q7Z4U5 140 aa12.62□□□□□ -0.39
CCDC78-216ENST00000544996 C8orf31Q8N9H6 132 aa12.62□□□□□ -0.39
CCDC78-216ENST00000544996 FAM3DQ96BQ1 224 aa12.62□□□□□ -0.39
CCDC78-216ENST00000544996 SULT4A1Q9BR01 284 aa12.62□□□□□ -0.39
CCDC78-216ENST00000544996 FAAP24Q9BTP7 215 aa12.62□□□□□ -0.39
CCDC78-216ENST00000544996 KCNK15Q9H427 330 aa12.62□□□□□ -0.39
CCDC78-216ENST00000544996 LIN7BQ9HAP6 207 aa12.62□□□□□ -0.39
CCDC78-216ENST00000544996 TAF9BQ9HBM6 251 aa12.62□□□□□ -0.39
CCDC78-216ENST00000544996 PLEKHJ1Q9NW61 149 aa12.62□□□□□ -0.39
CCDC78-216ENST00000544996 KIAA2026Q5HYC2 2103 aa12.62□□□□□ -0.39
CCDC78-216ENST00000544996 IGHV3-43A0A0B4J1X8 118 aa12.61□□□□□ -0.39
CCDC78-216ENST00000544996 A0A1W2PPE3 182 aa12.61□□□□□ -0.39
CCDC78-216ENST00000544996 PEX14O75381 377 aa12.61□□□□□ -0.39
CCDC78-216ENST00000544996 HBZP02008 142 aa12.61□□□□□ -0.39
CCDC78-216ENST00000544996 IGHV3-43DP0DP04 118 aa12.61□□□□□ -0.39
CCDC78-216ENST00000544996 ZNF773Q6PK81 442 aa12.61□□□□□ -0.39
CCDC78-216ENST00000544996 Q6ZTK2 550 aa12.61□□□□□ -0.39
CCDC78-216ENST00000544996 OR8H3Q8N146 312 aa12.61□□□□□ -0.39
CCDC78-216ENST00000544996 Q8N2B8 174 aa12.61□□□□□ -0.39
CCDC78-216ENST00000544996 LINC00311Q8N616 119 aa12.61□□□□□ -0.39
CCDC78-216ENST00000544996 OR51D1Q8NGF3 324 aa12.61□□□□□ -0.39
CCDC78-216ENST00000544996 MRPL30Q8TCC3 161 aaKnown RBP12.61□□□□□ -0.39
CCDC78-216ENST00000544996 OCSTAMPQ9BR26 566 aa12.61□□□□□ -0.39
CCDC78-216ENST00000544996 NICN1Q9BSH3 213 aa12.61□□□□□ -0.39
CCDC78-216ENST00000544996 SLC25A33Q9BSK2 321 aa12.61□□□□□ -0.39
CCDC78-216ENST00000544996 ZNF702PQ9H963 129 aa12.61□□□□□ -0.39
CCDC78-216ENST00000544996 MBNL3Q9NUK0 354 aaKnown RBP12.61□□□□□ -0.39
CCDC78-216ENST00000544996 STEAP1Q9UHE8 339 aa12.61□□□□□ -0.39
CCDC78-216ENST00000544996 OR2F2O95006 317 aa12.6□□□□□ -0.39
CCDC78-216ENST00000544996 GAPDHP04406 335 aaKnown RBP12.6□□□□□ -0.39
CCDC78-216ENST00000544996 VSIG10L2P0DP72 767 aa12.6□□□□□ -0.39
CCDC78-216ENST00000544996 CLDN12P56749 244 aa12.6□□□□□ -0.39
CCDC78-216ENST00000544996 BLCAPP62952 87 aa12.6□□□□□ -0.39
CCDC78-216ENST00000544996 C2orf76Q3KRA6 126 aa12.6□□□□□ -0.39
CCDC78-216ENST00000544996 HES5Q5TA89 166 aa12.6□□□□□ -0.39
CCDC78-216ENST00000544996 THNSL2Q86YJ6 484 aa12.6□□□□□ -0.39
CCDC78-216ENST00000544996 FAM89BQ8N5H3 189 aa12.6□□□□□ -0.39
CCDC78-216ENST00000544996 KLHDC1Q8N7A1 406 aa12.6□□□□□ -0.39
CCDC78-216ENST00000544996 OR56B4Q8NH76 319 aa12.6□□□□□ -0.39
CCDC78-216ENST00000544996 OR1L1Q8NH94 360 aa12.6□□□□□ -0.39
CCDC78-216ENST00000544996 RBM14Q96PK6 669 aaKnown RBP12.6□□□□□ -0.39
CCDC78-216ENST00000544996 LPAR5Q9H1C0 372 aa12.6□□□□□ -0.39
CCDC78-216ENST00000544996 RIMS4Q9H426 269 aaPredicted RBP12.6□□□□□ -0.39
CCDC78-216ENST00000544996 CHMP1AQ9HD42 196 aaPredicted RBP12.6□□□□□ -0.39
CCDC78-216ENST00000544996 OR2S2Q9NQN1 319 aa12.6□□□□□ -0.39
CCDC78-216ENST00000544996 ABRACLQ9P1F3 81 aa12.6□□□□□ -0.39
CCDC78-216ENST00000544996 IFITM5A6NNB3 132 aa12.59□□□□□ -0.39
CCDC78-216ENST00000544996 M0QZK8 103 aa12.59□□□□□ -0.39
CCDC78-216ENST00000544996 HSD17B6O14756 317 aa12.59□□□□□ -0.39
CCDC78-216ENST00000544996 LPLP06858 475 aa12.59□□□□□ -0.39
CCDC78-216ENST00000544996 RAB3BP20337 219 aa12.59□□□□□ -0.39
CCDC78-216ENST00000544996 HES1Q14469 280 aa12.59□□□□□ -0.39
CCDC78-216ENST00000544996 HERPUD1Q15011 391 aa12.59□□□□□ -0.39
CCDC78-216ENST00000544996 KCTD21Q4G0X4 260 aa12.59□□□□□ -0.39
CCDC78-216ENST00000544996 STEAP3Q658P3 488 aa12.59□□□□□ -0.39
CCDC78-216ENST00000544996 C22orf42Q6IC83 251 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms