RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 LDLRAD2Q5SZI1 272 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 DNAJC24Q6P3W2 148 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 FAHD1Q6P587 224 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 RNASEKQ6P5S7 137 aaKnown RBP2.49□□□□□ -2.01
USP28-210ENST00000542033 PRSS54Q6PEW0 395 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 EPGNQ6UW88 154 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 TIFABQ6ZNK6 161 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 Q6ZR54 194 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 COX15Q7KZN9 410 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 DOLPP1Q86YN1 238 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 SYS1Q8N2H4 156 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 GPD1LQ8N335 351 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 LINC00612Q8N6U2 182 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 KIR3DL3Q8N743 410 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 B3GNT7Q8NFL0 401 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 TSTD1Q8NFU3 115 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 SLC26A10Q8NG04 563 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 OR9G4Q8NGQ1 327 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 OR1L4Q8NGR5 311 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 OR1P1Q8NH06 330 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 GPR119Q8TDV5 335 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 CANT1Q8WVQ1 401 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 NRGNQ92686 78 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 ARL11Q969Q4 196 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 GPR146Q96CH1 333 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 PIK3IP1Q96FE7 263 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 ZFP3Q96NJ6 502 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 PSMG3Q9BT73 122 aaPredicted RBP2.49□□□□□ -2.01
USP28-210ENST00000542033 C1QTNF6Q9BXI9 259 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 OR51J1Q9H342 316 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 MFSD1Q9H3U5 465 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 PPDPFQ9H3Y8 114 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 CWH43Q9H720 699 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 UBE2ZQ9H832 354 aaPredicted RBP2.49□□□□□ -2.01
USP28-210ENST00000542033 ZDHHC11Q9H8X9 412 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 ANKRA2Q9H9E1 313 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 LRTM1Q9HBL6 345 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 ACOT13Q9NPJ3 140 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 GPATCH2LQ9NWQ4 482 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 MED29Q9NX70 200 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 DOK5Q9P104 306 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 WRAP73Q9P2S5 460 aaPredicted RBP2.49□□□□□ -2.01
USP28-210ENST00000542033 NAT8Q9UHE5 227 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 VAX2Q9UIW0 290 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 ZNF222Q9UK12 451 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 MCTS1Q9ULC4 181 aaKnown RBP2.49□□□□□ -2.01
USP28-210ENST00000542033 TP53TG3Q9ULZ0 132 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 C14orf166Q9Y224 244 aaKnown RBP2.49□□□□□ -2.01
USP28-210ENST00000542033 SLC17A4Q9Y2C5 497 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 UFC1Q9Y3C8 167 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 PPIAL4AQ9Y536 164 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 OR51B2Q9Y5P1 312 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 CD163L1Q9NR16 1453 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 LTN1O94822 1766 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 SCN11AQ9UI33 1791 aa2.49□□□□□ -2.01
USP28-210ENST00000542033 FMN2Q9NZ56 1722 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 NWD2Q9ULI1 1742 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 PTPRJQ12913 1337 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 MICAL3Q7RTP6 2002 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 IGLV3-10A0A075B6K4 115 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 IGKV6D-41A0A0C4DH26 115 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 DHRS12A0PJE2 317 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 PSMB11A5LHX3 300 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 SLC22A20A6NK97 555 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 BBIP1A8MTZ0 92 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 ZNF705EA8MWA4 302 aaPredicted RBP2.48□□□□□ -2.01
USP28-210ENST00000542033 J3QR89 54 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 MFNGO00587 321 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 LATO43561 262 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 ZNF354AO60765 605 aaPredicted RBP2.48□□□□□ -2.01
USP28-210ENST00000542033 FOXH1O75593 365 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 OR2A4O95047 310 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 DIRAS1O95057 198 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 CNIH1O95406 144 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 ETHE1O95571 254 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 IFNA1P01562 189 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 HBZP02008 142 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 OPN1SWP03999 348 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 SERPINA7P05543 415 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 CD55P08174 381 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 OR4Q2P0C623 313 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 MPC1LP0DKB6 136 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 C8orf88P0DMB2 117 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 CT45A10P0DMU9 189 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 OR5H8P0DN80 308 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 ESDP10768 282 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 IL1RNP18510 177 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 GABRR2P28476 465 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 CD1CP29017 333 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 OR10J1P30954 320 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 APLNRP35414 380 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 TGFBR1P36897 503 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 OR1D4P47884 311 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 INPP1P49441 399 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 AKR1C2P52895 323 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 TAS2R43P59537 309 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 PLP1P60201 277 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 SLC35A1P78382 337 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 CD47Q08722 323 aa2.48□□□□□ -2.01
USP28-210ENST00000542033 ZNF763Q0D2J5 394 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms