RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 MTORP42345 2549 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 LOC105371242A0A075B767 164 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 TRGV10A0A0A0MS01 117 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 TRBV6-7A0A0A0MS04 114 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 TRDCB7Z8K6 153 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 ENSAO43768 121 aaKnown RBP8.65□□□□□ -1.02
VPS33A-204ENST00000540669 TUSC2O75896 110 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 FSHBP01225 129 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 ZNF728P0DKX0 622 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 CCL3L1P16619 93 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 NDUFB7P17568 137 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 KIR2DS4P43632 304 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 GZMKP49863 264 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 EDDM3BP56851 147 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 HTD2P86397 168 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 PAX8Q06710 450 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 KIR2DS1Q14954 304 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 Q3ZCU0 254 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 C8orf31Q8N9H6 132 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 TMEM229BQ8NBD8 167 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 ZNF439Q8NDP4 499 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 BEST4Q8NFU0 473 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 OR4A4PQ8NGN8 299 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 MRGPRDQ8TDS7 321 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 MSI2Q96DH6 328 aaKnown RBP8.65□□□□□ -1.02
VPS33A-204ENST00000540669 KIRREL1Q96J84 757 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 ZNF714Q96N38 554 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 TAF9BQ9HBM6 251 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 MMP26Q9NRE1 261 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 ZNF230Q9UIE0 474 aaPredicted RBP8.65□□□□□ -1.02
VPS33A-204ENST00000540669 PCDHB10Q9UN67 800 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 MRPS7Q9Y2R9 242 aaKnown RBP8.65□□□□□ -1.02
VPS33A-204ENST00000540669 KPTNQ9Y664 436 aa8.65□□□□□ -1.02
VPS33A-204ENST00000540669 SONP18583 2426 aaKnown RBP8.64□□□□□ -1.03
VPS33A-204ENST00000540669 TRAV39A0A0B4J263 110 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 TRAV20A0A0B4J274 112 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 A0A1W2PQ09 198 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 B4DSR2 109 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 J3QRK9 145 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 ITGB1BP1O14713 200 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 FABP7O15540 132 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 MMP23AO75900 390 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 HBZP02008 142 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 LIPFP07098 398 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 ZNF735P0CB33 412 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 GZMHP20718 246 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 HNF1AP20823 631 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 BTCP35070 178 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 GLP1RP43220 463 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 DVL1P1P54792 670 aaPredicted RBP8.64□□□□□ -1.03
VPS33A-204ENST00000540669 RIPPLY3P57055 190 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 C4orf48Q5BLP8 95 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 UTF1Q5T230 341 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 HCP5Q6MZN7 132 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 OVCH2Q7RTZ1 564 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 C5orf24Q7Z6I8 188 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 LHFPL1Q86WI0 220 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 LDLRAD3Q86YD5 345 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 FAM216AQ8WUB2 273 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 FCAMRQ8WWV6 532 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 MAFIPQ8WZ33 124 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 MRGPRFQ96AM1 343 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 TSC22D3Q99576 134 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 THAP7Q9BT49 309 aaPredicted RBP8.64□□□□□ -1.03
VPS33A-204ENST00000540669 ZNF286AQ9HBT8 521 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 PALMDQ9NP74 551 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 SLC2A8Q9NY64 477 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 JPT1Q9UK76 154 aa8.64□□□□□ -1.03
VPS33A-204ENST00000540669 NAV3Q8IVL0 2385 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 MEIS3P1A6NDR6 274 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 UPK1BO75841 260 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 SCTP09683 121 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 GATA3P23771 443 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 PRTN3P24158 256 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 FPR2P25090 351 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 TAS2R46P59540 309 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 LCN2P80188 198 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 DYRK1AQ13627 763 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 ACTBL2Q562R1 376 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 PYDC2Q56P42 97 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 STEAP3Q658P3 488 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 CYB5R2Q6BCY4 276 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 OR52W1Q6IF63 320 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 H1FOOQ8IZA3 346 aaPredicted RBP8.63□□□□□ -1.03
VPS33A-204ENST00000540669 LINC01356Q8N9X3 169 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 OR5AP2Q8NGF4 316 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 OR1L1Q8NH94 360 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 H1FXQ92522 213 aaKnown RBP8.63□□□□□ -1.03
VPS33A-204ENST00000540669 TBX15Q96SF7 602 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 TMPRSS13Q9BYE2 586 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 GAL3ST2Q9H3Q3 398 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 GFOD1Q9NXC2 390 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 TAS2R8Q9NYW2 309 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 TRAPPC2LQ9UL33 140 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 TBC1D24Q9ULP9 559 aa8.63□□□□□ -1.03
VPS33A-204ENST00000540669 ODF3BA8MYP8 253 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 J3QLI3 93 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 PLA2G10O15496 165 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 RBBP9O75884 186 aa8.62□□□□□ -1.03
VPS33A-204ENST00000540669 IGLV1-47P01700 117 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms