RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 OR7C1O76099 320 aaPredicted RBP10.85□□□□□ -0.67
SMARCA4-206ENST00000538456 HTR3BO95264 441 aa10.85□□□□□ -0.67
SMARCA4-206ENST00000538456 GZMHP20718 246 aa10.85□□□□□ -0.67
SMARCA4-206ENST00000538456 VHLP40337 213 aa10.85□□□□□ -0.67
SMARCA4-206ENST00000538456 SLURP1P55000 103 aa10.85□□□□□ -0.67
SMARCA4-206ENST00000538456 RUNX1Q01196 453 aa10.85□□□□□ -0.67
SMARCA4-206ENST00000538456 TMED1Q13445 227 aa10.85□□□□□ -0.67
SMARCA4-206ENST00000538456 ALKBH1Q13686 389 aaKnown RBP10.85□□□□□ -0.67
SMARCA4-206ENST00000538456 KIAA0141Q14154 515 aaPredicted RBP10.85□□□□□ -0.67
SMARCA4-206ENST00000538456 MMDQ15546 238 aa10.85□□□□□ -0.67
SMARCA4-206ENST00000538456 ZDHHC13Q8IUH4 622 aa10.85□□□□□ -0.67
SMARCA4-206ENST00000538456 SERPINA12Q8IW75 414 aa10.85□□□□□ -0.67
SMARCA4-206ENST00000538456 LINC00311Q8N616 119 aa10.85□□□□□ -0.67
SMARCA4-206ENST00000538456 PXT1Q8NFP0 134 aa10.85□□□□□ -0.67
SMARCA4-206ENST00000538456 DLX4Q92988 240 aaPredicted RBP10.85□□□□□ -0.67
SMARCA4-206ENST00000538456 C4orf36Q96KX1 117 aa10.85□□□□□ -0.67
SMARCA4-206ENST00000538456 PARP11Q9NR21 331 aa10.85□□□□□ -0.67
SMARCA4-206ENST00000538456 GFOD1Q9NXC2 390 aa10.85□□□□□ -0.67
SMARCA4-206ENST00000538456 ATP6V0E1O15342 81 aa10.84□□□□□ -0.67
SMARCA4-206ENST00000538456 CDRT1O95170 752 aa10.84□□□□□ -0.67
SMARCA4-206ENST00000538456 FASP25445 335 aa10.84□□□□□ -0.67
SMARCA4-206ENST00000538456 PPIFP30405 207 aaKnown RBP10.84□□□□□ -0.67
SMARCA4-206ENST00000538456 ATP6AP1Q15904 470 aa10.84□□□□□ -0.67
SMARCA4-206ENST00000538456 C8orf31Q8N9H6 132 aa10.84□□□□□ -0.67
SMARCA4-206ENST00000538456 OR51A2Q8NGJ7 313 aa10.84□□□□□ -0.67
SMARCA4-206ENST00000538456 OR52M1Q8NGK5 317 aa10.84□□□□□ -0.67
SMARCA4-206ENST00000538456 NEK7Q8TDX7 302 aa10.84□□□□□ -0.67
SMARCA4-206ENST00000538456 TSEN15Q8WW01 171 aaKnown RBP10.84□□□□□ -0.67
SMARCA4-206ENST00000538456 NRG4Q8WWG1 115 aa10.84□□□□□ -0.67
SMARCA4-206ENST00000538456 ARPC1AQ92747 370 aa10.84□□□□□ -0.67
SMARCA4-206ENST00000538456 TM2D3Q9BRN9 247 aa10.84□□□□□ -0.67
SMARCA4-206ENST00000538456 GABARAPL1Q9H0R8 117 aa10.84□□□□□ -0.67
SMARCA4-206ENST00000538456 VCX3BQ9H321 246 aa10.84□□□□□ -0.67
SMARCA4-206ENST00000538456 EDA2RQ9HAV5 297 aa10.84□□□□□ -0.67
SMARCA4-206ENST00000538456 ZNF580Q9UK33 172 aa10.84□□□□□ -0.67
SMARCA4-206ENST00000538456 ST3GAL6Q9Y274 331 aa10.84□□□□□ -0.67
SMARCA4-206ENST00000538456 TRAV41A0A0B4J266 112 aa10.83□□□□□ -0.68
SMARCA4-206ENST00000538456 MAGEB3O15480 346 aa10.83□□□□□ -0.68
SMARCA4-206ENST00000538456 TXNL1O43396 289 aa10.83□□□□□ -0.68
SMARCA4-206ENST00000538456 IGLV1-40P01703 118 aa10.83□□□□□ -0.68
SMARCA4-206ENST00000538456 RAB3AP20336 220 aa10.83□□□□□ -0.68
SMARCA4-206ENST00000538456 RAB9AP51151 201 aa10.83□□□□□ -0.68
SMARCA4-206ENST00000538456 OGFRL1Q5TC84 451 aaPredicted RBP10.83□□□□□ -0.68
SMARCA4-206ENST00000538456 SLC25A48Q6ZT89 311 aaKnown RBP10.83□□□□□ -0.68
SMARCA4-206ENST00000538456 AMIGO2Q86SJ2 522 aa10.83□□□□□ -0.68
SMARCA4-206ENST00000538456 HAPLN4Q86UW8 402 aa10.83□□□□□ -0.68
SMARCA4-206ENST00000538456 PRR18Q8N4B5 295 aa10.83□□□□□ -0.68
SMARCA4-206ENST00000538456 PARP16Q8N5Y8 322 aa10.83□□□□□ -0.68
SMARCA4-206ENST00000538456 OR10V1Q8NGI7 309 aa10.83□□□□□ -0.68
SMARCA4-206ENST00000538456 OR6Q1Q8NGQ2 317 aa10.83□□□□□ -0.68
SMARCA4-206ENST00000538456 CASTOR1Q8WTX7 329 aa10.83□□□□□ -0.68
SMARCA4-206ENST00000538456 CPNE2Q96FN4 548 aaPredicted RBP10.83□□□□□ -0.68
SMARCA4-206ENST00000538456 OR51J1Q9H342 316 aa10.83□□□□□ -0.68
SMARCA4-206ENST00000538456 GNG12Q9UBI6 72 aa10.83□□□□□ -0.68
SMARCA4-206ENST00000538456 DHDHQ9UQ10 334 aa10.83□□□□□ -0.68
SMARCA4-206ENST00000538456 J3QRE1 110 aa10.82□□□□□ -0.68
SMARCA4-206ENST00000538456 AIPO00170 330 aa10.82□□□□□ -0.68
SMARCA4-206ENST00000538456 GEMIN2O14893 280 aaKnown RBP10.82□□□□□ -0.68
SMARCA4-206ENST00000538456 LDLRAD4O15165 306 aa10.82□□□□□ -0.68
SMARCA4-206ENST00000538456 IGHV4-30-4P0DP06 118 aa10.82□□□□□ -0.68
SMARCA4-206ENST00000538456 CNTFRP26992 372 aa10.82□□□□□ -0.68
SMARCA4-206ENST00000538456 RBM11P57052 281 aaKnown RBP10.82□□□□□ -0.68
SMARCA4-206ENST00000538456 LSAMPQ13449 338 aa10.82□□□□□ -0.68
SMARCA4-206ENST00000538456 ATAD3CQ5T2N8 411 aa10.82□□□□□ -0.68
SMARCA4-206ENST00000538456 CENPNQ96H22 339 aaPredicted RBP10.82□□□□□ -0.68
SMARCA4-206ENST00000538456 PDCD1LG2Q9BQ51 273 aa10.82□□□□□ -0.68
SMARCA4-206ENST00000538456 GABARAPL3Q9BY60 117 aa10.82□□□□□ -0.68
SMARCA4-206ENST00000538456 GHITMQ9H3K2 345 aa10.82□□□□□ -0.68
SMARCA4-206ENST00000538456 ISG20L2Q9H9L3 353 aaKnown RBP10.82□□□□□ -0.68
SMARCA4-206ENST00000538456 IMPAD1Q9NX62 359 aa10.82□□□□□ -0.68
SMARCA4-206ENST00000538456 TAS2R4Q9NYW5 299 aa10.82□□□□□ -0.68
SMARCA4-206ENST00000538456 TNCP24821 2201 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 IGHV4OR15-8A0A075B7B6 117 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 A0A087WW49 117 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 LINC01619G3V211 115 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 ORC5O43913 435 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 SERPINA2P20848 420 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 BLVRBP30043 206 aaPredicted RBP10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 SOX2P48431 317 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 ZNF134P52741 427 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 ZNF137PP52743 207 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 ECSCRQ19T08 205 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 CT45A1Q5HYN5 189 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 ACSM6Q6P461 480 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 LHFPL3Q86UP9 236 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 ACBD7Q8N6N7 88 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 ZNF439Q8NDP4 499 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 OR52N1Q8NH53 320 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 OR5AK2Q8NH90 309 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 CT45A3Q8NHU0 189 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 RITA1Q96K30 269 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 CHCHD6Q9BRQ6 235 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 ALG8Q9BVK2 526 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 IFT22Q9H7X7 185 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 ING4Q9UNL4 249 aa10.81□□□□□ -0.68
SMARCA4-206ENST00000538456 IGHV7-81A0A0B4J1V7 117 aa10.8□□□□□ -0.68
SMARCA4-206ENST00000538456 MAGEA13PA6NCF6 341 aa10.8□□□□□ -0.68
SMARCA4-206ENST00000538456 FAM90A10PA6NDY2 464 aa10.8□□□□□ -0.68
SMARCA4-206ENST00000538456 TMEM212A6NML5 194 aa10.8□□□□□ -0.68
SMARCA4-206ENST00000538456 C12orf77C9JDV5 145 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms