RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 RBM11P57052 281 aaKnown RBP6.03□□□□□ -1.44
MSH6-209ENST00000538136 PITPNAQ00169 270 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 TNXAQ16473 311 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 WDR86Q86TI4 376 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 BCL6BQ8N143 479 aaPredicted RBP6.03□□□□□ -1.44
MSH6-209ENST00000538136 OR13F1Q8NGS4 319 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 RAB40AQ8WXH6 277 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 SSX3Q99909 188 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 BATF3Q9NR55 127 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 IL36GQ9NZH8 169 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 IGHV3-49A0A0A0MS15 119 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 CDK2AP1O14519 115 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 IGHV3-23P01764 117 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 ZNF250P15622 560 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 ZBTB25P24278 435 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 IL3RAP26951 378 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 MTNR1BP49286 362 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 Q8IYB0 196 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 CD177Q8N6Q3 437 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 PLPPR1Q8TBJ4 325 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 SMIM3Q9BZL3 60 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 PLEKHF2Q9H8W4 249 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 CCL28Q9NRJ3 127 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 MGAT4AQ9UM21 535 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 SSUH2Q9Y2M2 353 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 SIGLEC9Q9Y336 463 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 PRELID3BQ9Y3B1 194 aa6.03□□□□□ -1.44
MSH6-209ENST00000538136 C22orf46C9J442 243 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 SLC25A17O43808 307 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 RGS11O94810 467 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 LPLP06858 475 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 DANCRP0C864 163 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 IGHV4-38-2P0DP08 117 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 LUMP51884 338 aaPredicted RBP6.02□□□□□ -1.45
MSH6-209ENST00000538136 PRRX1P54821 245 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 OR2B8PP59922 312 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 CD276Q5ZPR3 534 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 SPAG16Q8N0X2 631 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 SERPINE3A8MV23 424 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 TRIM77I1YAP6 450 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 SIX6O95475 246 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 CEBPGP53567 150 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 F2RL1P55085 397 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 HCP5Q6MZN7 132 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 STEAP1BQ6NZ63 245 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 VMO1Q7Z5L0 202 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 LRRC28Q86X40 367 aaPredicted RBP6.02□□□□□ -1.45
MSH6-209ENST00000538136 KIR3DL3Q8N743 410 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 TMEM217Q8N7C4 229 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 OR13D1Q8NGV5 346 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 OR1S1Q8NH92 325 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 KCTD12Q96CX2 325 aaKnown RBP6.02□□□□□ -1.45
MSH6-209ENST00000538136 SPOCK3Q9BQ16 436 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 ZNF649Q9BS31 505 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 PBDC1Q9BVG4 233 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 HEYLQ9NQ87 328 aaPredicted RBP6.02□□□□□ -1.45
MSH6-209ENST00000538136 L7N2F9 121 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 LY6G6DO95868 133 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 IFNA10P01566 189 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 IGLV1-44P01699 117 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 WNT2P09544 360 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 HIST1H1DP16402 221 aaKnown RBP6.02□□□□□ -1.45
MSH6-209ENST00000538136 TFPI2P48307 235 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 AP3S2P59780 193 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 VAMP2P63027 116 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 DPF1Q92782 380 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 PECRQ9BY49 303 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 PARP12Q9H0J9 701 aaKnown RBP6.02□□□□□ -1.45
MSH6-209ENST00000538136 COMMD9Q9P000 198 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 TBC1D24Q9ULP9 559 aa6.02□□□□□ -1.45
MSH6-209ENST00000538136 IGKV1D-17A0A075B6S4 117 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 KIR2DS1A0A191URI9 304 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 TMEM82A0PJX8 343 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 MMP23AO75900 390 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 IGKV1D-33P01593 117 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 IGKV1-33P01594 117 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 BRS3P32247 399 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 KIR2DS4P43632 304 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 SSTP61278 116 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 KIR2DS1Q14954 304 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 FAM110DQ8TAY7 271 aaPredicted RBP6.01□□□□□ -1.45
MSH6-209ENST00000538136 HAVCR2Q8TDQ0 301 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 PATZ1Q9HBE1 687 aaKnown RBP6.01□□□□□ -1.45
MSH6-209ENST00000538136 SLC35D1Q9NTN3 355 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 CEPT1Q9Y6K0 416 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 ARPC4-TTLL3A0A0A6YYG9 625 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 IL1AP01583 271 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 FBP1P09467 338 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 ZFP36P26651 326 aaKnown RBP6.01□□□□□ -1.45
MSH6-209ENST00000538136 CD83Q01151 205 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 TMEM95Q3KNT9 176 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 C6orf183Q5T699 404 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 SHEQ5VZ18 495 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 OR8G2PQ6IF36 304 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 TPRA1Q86W33 373 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 PARP16Q8N5Y8 322 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 LILRB1Q8NHL6 650 aaPredicted RBP6.01□□□□□ -1.45
MSH6-209ENST00000538136 DUX3Q96PT4 197 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 ABHD1Q96SE0 405 aa6.01□□□□□ -1.45
MSH6-209ENST00000538136 COA4Q9NYJ1 87 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms