RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 RPRD1BQ9NQG5 326 aaKnown RBP-0.57□□□□□ -2.5
COPB1-212ENST00000534771 LYARQ9NX58 379 aaKnown RBP-0.57□□□□□ -2.5
COPB1-212ENST00000534771 ZFP30Q9Y2G7 519 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 AP1M2Q9Y6Q5 423 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 E9PCH4 1651 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 SCN9AQ15858 1988 aa-0.57□□□□□ -2.5
COPB1-212ENST00000534771 ABCA4P78363 2273 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 MAP1AP78559 2803 aaPredicted RBP-0.58□□□□□ -2.5
COPB1-212ENST00000534771 KCNE1BA0A087WTH5 132 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 LOC110117498A0A087WWA1 95 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 TRAV8-3A0A0A6YYJ7 113 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 IGHV2-26A0A0B4J1V2 119 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 FAM240AA0A1B0GVK7 77 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 K7EQS6 105 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 NCR3O14931 201 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 MPDU1O75352 247 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 CA2P00918 260 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 UCHL1P09936 223 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 ESDP10768 282 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 RPL27AP46776 148 aaKnown RBP-0.58□□□□□ -2.5
COPB1-212ENST00000534771 XCL1P47992 114 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 AQP4P55087 323 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 RAB25P57735 213 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 ACTR3P61158 418 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 YWHAEP62258 255 aaKnown RBP-0.58□□□□□ -2.5
COPB1-212ENST00000534771 PAFAH1B2P68402 229 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 SLC35A2P78381 396 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 BSPH1Q075Z2 132 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 TMEM249Q2WGJ8 235 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 IDNKQ5T6J7 187 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 SYT6Q5T7P8 510 aaPredicted RBP-0.58□□□□□ -2.5
COPB1-212ENST00000534771 FAM173BQ6P4H8 233 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 FAM43BQ6ZT52 329 aaPredicted RBP-0.58□□□□□ -2.5
COPB1-212ENST00000534771 SLC36A1Q7Z2H8 476 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 FMC1Q96HJ9 113 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 ZBTB18Q99592 522 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 ACBD6Q9BR61 282 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 GOLPH3Q9H4A6 298 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 C11orf1Q9H5F2 150 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 ANKHQ9HCJ1 492 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 C12orf4Q9NQ89 552 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 SNX12Q9UMY4 172 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 BAZ2BQ9UIF8 2168 aaKnown RBP-0.58□□□□□ -2.5
COPB1-212ENST00000534771 SETD5Q9C0A6 1442 aa-0.58□□□□□ -2.5
COPB1-212ENST00000534771 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP-0.58□□□□□ -2.53e-9■■□□□ 11.4
COPB1-212ENST00000534771 ADAMTSL3P82987 1691 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 YLPM1P49750 1951 aaKnown RBP-0.59□□□□□ -2.5
COPB1-212ENST00000534771 HEATR9A2RTY3 570 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 CTAGE15A4D2H0 777 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 ZNF701M0R085 212 aaPredicted RBP-0.59□□□□□ -2.5
COPB1-212ENST00000534771 DFFAO00273 331 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 SLC17A3O00476 420 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 PHYHO14832 338 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 TCF21O43680 179 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 OR2T1O43869 369 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 ORC5O43913 435 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 FCN3O75636 299 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 B3GALNT1O75752 331 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 ZMPSTE24O75844 475 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 MYO1DO94832 1006 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 LTAP01374 205 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 ZNF3P17036 446 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 M6PRP20645 277 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 HMOX2P30519 316 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 GPR1P46091 355 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 IFNAR2P48551 515 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 IL24Q13007 206 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 GPM6BQ13491 265 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 ANKDD1AQ495B1 522 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 TRMT12Q53H54 448 aaKnown RBP-0.59□□□□□ -2.5
COPB1-212ENST00000534771 CASC1Q6TDU7 716 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 EPGNQ6UW88 154 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 CLEC20AQ6ZU45 233 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 CTAGE6Q86UF2 777 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 CYP4Z1Q86W10 505 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 APRG1Q8IVJ8 170 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 NELFCDQ8IXH7 590 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 PROKR2Q8NFJ6 384 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 ASB13Q8WXK3 278 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 CCL17Q92583 94 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 NT5C3BQ969T7 300 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 CMTM5Q96DZ9 223 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 PRRT1Q99946 306 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 C1QTNF6Q9BXI9 259 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 SHCBP1LQ9BZQ2 653 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 PKIBQ9C010 78 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 SLC25A31Q9H0C2 315 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 POMKQ9H5K3 350 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 ANKRA2Q9H9E1 313 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 ANXA10Q9UJ72 324 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 POMPQ9Y244 141 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 CFL2Q9Y281 166 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 RHBDD3Q9Y3P4 386 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 ALG5Q9Y673 324 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 GMEB1Q9Y692 573 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 HSPG2P98160 4391 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 MYO5BQ9ULV0 1848 aa-0.59□□□□□ -2.5
COPB1-212ENST00000534771 ASH1LQ9NR48 2969 aaKnown RBP-0.6□□□□□ -2.5
COPB1-212ENST00000534771 CACNA1AO00555 2505 aa-0.6□□□□□ -2.5
COPB1-212ENST00000534771 NAV1Q8NEY1 1877 aa-0.6□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms