RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 TOR1AO14656 332 aa17.16■□□□□ 0.34
PKP3-211ENST00000534401 PDCD5O14737 125 aa17.16■□□□□ 0.34
PKP3-211ENST00000534401 RCC1P18754 421 aaPredicted RBP17.16■□□□□ 0.34
PKP3-211ENST00000534401 CEACAM3P40198 252 aa17.16■□□□□ 0.34
PKP3-211ENST00000534401 TMEM50BP56557 158 aa17.16■□□□□ 0.34
PKP3-211ENST00000534401 C2orf76Q3KRA6 126 aa17.16■□□□□ 0.34
PKP3-211ENST00000534401 C6orf183Q5T699 404 aa17.16■□□□□ 0.34
PKP3-211ENST00000534401 NR2C2APQ86WQ0 139 aa17.16■□□□□ 0.34
PKP3-211ENST00000534401 OR51D1Q8NGF3 324 aa17.16■□□□□ 0.34
PKP3-211ENST00000534401 OR4K15Q8NH41 348 aa17.16■□□□□ 0.34
PKP3-211ENST00000534401 NEDD4LQ96PU5 975 aa17.16■□□□□ 0.34
PKP3-211ENST00000534401 TXNL4BQ9NX01 149 aaKnown RBP17.16■□□□□ 0.34
PKP3-211ENST00000534401 STEAP1Q9UHE8 339 aa17.16■□□□□ 0.34
PKP3-211ENST00000534401 PITPNC1Q9UKF7 332 aa17.16■□□□□ 0.34
PKP3-211ENST00000534401 HSF4Q9ULV5 492 aa17.16■□□□□ 0.34
PKP3-211ENST00000534401 STUB1Q9UNE7 303 aa17.16■□□□□ 0.34
PKP3-211ENST00000534401 IFITM5A6NNB3 132 aa17.15■□□□□ 0.34
PKP3-211ENST00000534401 FAM90A9PA6NNJ1 464 aa17.15■□□□□ 0.34
PKP3-211ENST00000534401 NAPSAO96009 420 aa17.15■□□□□ 0.34
PKP3-211ENST00000534401 C22orf42Q6IC83 251 aa17.15■□□□□ 0.34
PKP3-211ENST00000534401 ZNF880Q6PDB4 577 aa17.15■□□□□ 0.34
PKP3-211ENST00000534401 C6orf201Q7Z4U5 140 aa17.15■□□□□ 0.34
PKP3-211ENST00000534401 Q8N2B8 174 aa17.15■□□□□ 0.34
PKP3-211ENST00000534401 URM1Q9BTM9 101 aaKnown RBP17.15■□□□□ 0.34
PKP3-211ENST00000534401 ABCB10Q9NRK6 738 aa17.15■□□□□ 0.34
PKP3-211ENST00000534401 TRAPPC2LQ9UL33 140 aa17.15■□□□□ 0.34
PKP3-211ENST00000534401 RNF114Q9Y508 228 aa17.15■□□□□ 0.34
PKP3-211ENST00000534401 TRBV6-6A0A0A6YYG2 114 aa17.14■□□□□ 0.33
PKP3-211ENST00000534401 BLVRBP30043 206 aaPredicted RBP17.14■□□□□ 0.33
PKP3-211ENST00000534401 CLDN12P56749 244 aa17.14■□□□□ 0.33
PKP3-211ENST00000534401 OR10A3P58181 314 aa17.14■□□□□ 0.33
PKP3-211ENST00000534401 PLA1AQ53H76 456 aa17.14■□□□□ 0.33
PKP3-211ENST00000534401 Q6ZPA2 131 aa17.14■□□□□ 0.33
PKP3-211ENST00000534401 ZNF439Q8NDP4 499 aa17.14■□□□□ 0.33
PKP3-211ENST00000534401 LEAP2Q969E1 77 aa17.14■□□□□ 0.33
PKP3-211ENST00000534401 CITED1Q99966 193 aa17.14■□□□□ 0.33
PKP3-211ENST00000534401 FAAP24Q9BTP7 215 aa17.14■□□□□ 0.33
PKP3-211ENST00000534401 RAB9BQ9NP90 201 aa17.14■□□□□ 0.33
PKP3-211ENST00000534401 AMMECR1Q9Y4X0 333 aaPredicted RBP17.14■□□□□ 0.33
PKP3-211ENST00000534401 PKD1L1Q8TDX9 2849 aa17.13■□□□□ 0.33
PKP3-211ENST00000534401 TRIM64CA6NLI5 447 aa17.13■□□□□ 0.33
PKP3-211ENST00000534401 SOCS1O15524 211 aa17.13■□□□□ 0.33
PKP3-211ENST00000534401 HBZP02008 142 aa17.13■□□□□ 0.33
PKP3-211ENST00000534401 RAB3BP20337 219 aa17.13■□□□□ 0.33
PKP3-211ENST00000534401 MYL9P24844 172 aa17.13■□□□□ 0.33
PKP3-211ENST00000534401 KRTAP10-3P60369 221 aa17.13■□□□□ 0.33
PKP3-211ENST00000534401 LY6G6FQ5SQ64 297 aa17.13■□□□□ 0.33
PKP3-211ENST00000534401 THNSL2Q86YJ6 484 aa17.13■□□□□ 0.33
PKP3-211ENST00000534401 ST6GALNAC6Q969X2 333 aa17.13■□□□□ 0.33
PKP3-211ENST00000534401 OCSTAMPQ9BR26 566 aa17.13■□□□□ 0.33
PKP3-211ENST00000534401 TAF9BQ9HBM6 251 aa17.13■□□□□ 0.33
PKP3-211ENST00000534401 RAB22AQ9UL26 194 aa17.13■□□□□ 0.33
PKP3-211ENST00000534401 TMEM272A0A1B0GTI8 110 aa17.12■□□□□ 0.33
PKP3-211ENST00000534401 HAX1O00165 279 aa17.12■□□□□ 0.33
PKP3-211ENST00000534401 SDCBPO00560 298 aaPredicted RBP17.12■□□□□ 0.33
PKP3-211ENST00000534401 SPINT2O43291 252 aa17.12■□□□□ 0.33
PKP3-211ENST00000534401 BRS3P32247 399 aa17.12■□□□□ 0.33
PKP3-211ENST00000534401 EFNB2P52799 333 aa17.12■□□□□ 0.33
PKP3-211ENST00000534401 PLA2G7Q13093 441 aa17.12■□□□□ 0.33
PKP3-211ENST00000534401 MADCAM1Q13477 382 aa17.12■□□□□ 0.33
PKP3-211ENST00000534401 HABP2Q14520 560 aaPredicted RBP17.12■□□□□ 0.33
PKP3-211ENST00000534401 LTC4SQ16873 150 aa17.12■□□□□ 0.33
PKP3-211ENST00000534401 HES5Q5TA89 166 aa17.12■□□□□ 0.33
PKP3-211ENST00000534401 STEAP3Q658P3 488 aa17.12■□□□□ 0.33
PKP3-211ENST00000534401 FAM53AQ6NSI3 398 aaPredicted RBP17.12■□□□□ 0.33
PKP3-211ENST00000534401 CCDC144NLQ6NUI1 221 aa17.12■□□□□ 0.33
PKP3-211ENST00000534401 TPRA1Q86W33 373 aa17.12■□□□□ 0.33
PKP3-211ENST00000534401 DTX3Q8N9I9 347 aa17.12■□□□□ 0.33
PKP3-211ENST00000534401 OR1L1Q8NH94 360 aa17.12■□□□□ 0.33
PKP3-211ENST00000534401 SGMS2Q8NHU3 365 aa17.12■□□□□ 0.33
PKP3-211ENST00000534401 NPFFR1Q9GZQ6 430 aa17.12■□□□□ 0.33
PKP3-211ENST00000534401 MGAM2Q2M2H8 2515 aa17.12■□□□□ 0.33
PKP3-211ENST00000534401 TRRAPQ9Y4A5 3859 aa17.12■□□□□ 0.33
PKP3-211ENST00000534401 A0A1W2PPI3 338 aa17.11■□□□□ 0.33
PKP3-211ENST00000534401 IGHV3-7P01780 117 aa17.11■□□□□ 0.33
PKP3-211ENST00000534401 ZNF137PP52743 207 aa17.11■□□□□ 0.33
PKP3-211ENST00000534401 HTD2P86397 168 aa17.11■□□□□ 0.33
PKP3-211ENST00000534401 ZNF816Q0VGE8 651 aaPredicted RBP17.11■□□□□ 0.33
PKP3-211ENST00000534401 HMGN3Q15651 99 aa17.11■□□□□ 0.33
PKP3-211ENST00000534401 NKAPLQ5M9Q1 402 aa17.11■□□□□ 0.33
PKP3-211ENST00000534401 SLC25A48Q6ZT89 311 aaKnown RBP17.11■□□□□ 0.33
PKP3-211ENST00000534401 C16orf82Q7Z2V1 217 aa17.11■□□□□ 0.33
PKP3-211ENST00000534401 UBALD1Q8TB05 177 aa17.11■□□□□ 0.33
PKP3-211ENST00000534401 CFHR4Q92496 578 aa17.11■□□□□ 0.33
PKP3-211ENST00000534401 PTX4Q96A99 478 aa17.11■□□□□ 0.33
PKP3-211ENST00000534401 OR51E2Q9H255 320 aa17.11■□□□□ 0.33
PKP3-211ENST00000534401 RIMS4Q9H426 269 aaPredicted RBP17.11■□□□□ 0.33
PKP3-211ENST00000534401 ZNF702PQ9H963 129 aa17.11■□□□□ 0.33
PKP3-211ENST00000534401 PLEKHJ1Q9NW61 149 aa17.11■□□□□ 0.33
PKP3-211ENST00000534401 SSR3Q9UNL2 185 aa17.11■□□□□ 0.33
PKP3-211ENST00000534401 WNK1Q9H4A3 2382 aa17.1■□□□□ 0.33
PKP3-211ENST00000534401 NBEAL1Q6ZS30 2694 aa17.1■□□□□ 0.33
PKP3-211ENST00000534401 TNFAIP8O95379 198 aa17.1■□□□□ 0.33
PKP3-211ENST00000534401 RAB6AP20340 208 aa17.1■□□□□ 0.33
PKP3-211ENST00000534401 RAB7AP51149 207 aa17.1■□□□□ 0.33
PKP3-211ENST00000534401 ARHGDIBP52566 201 aa17.1■□□□□ 0.33
PKP3-211ENST00000534401 DIAPH2-AS1Q14236 149 aa17.1■□□□□ 0.33
PKP3-211ENST00000534401 FBLN7Q53RD9 439 aa17.1■□□□□ 0.33
PKP3-211ENST00000534401 C11orf88Q6PI97 169 aa17.1■□□□□ 0.33
PKP3-211ENST00000534401 TMEM219Q86XT9 240 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 338 ms