RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 LPAR2Q9HBW0 351 aa6.9□□□□□ -1.31
NEDD8-207ENST00000533242 CYTL1Q9NRR1 136 aa6.9□□□□□ -1.31
NEDD8-207ENST00000533242 TREM2Q9NZC2 230 aa6.9□□□□□ -1.31
NEDD8-207ENST00000533242 TRBV6-7A0A0A0MS04 114 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 A0A0B4J2A0 478 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 ZNF503-AS2A6NEH8 195 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 F5H0A9 414 aaPredicted RBP6.89□□□□□ -1.31
NEDD8-207ENST00000533242 SNAPC5O75971 98 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 SFTPBP07988 381 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 NR2C1P13056 603 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 HTR5AP47898 357 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 FOXL1Q12952 345 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 RAB32Q13637 225 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 KRTAP27-1Q3LI81 207 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 C1orf229Q6ZS94 237 aaPredicted RBP6.89□□□□□ -1.31
NEDD8-207ENST00000533242 CPEB3Q8NE35 698 aaKnown RBP6.89□□□□□ -1.31
NEDD8-207ENST00000533242 OR1S2Q8NGQ3 325 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 THAP6Q8TBB0 222 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 SPTSSAQ969W0 71 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 FOXB1Q99853 325 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 SULT4A1Q9BR01 284 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 MRPL37Q9BZE1 423 aaKnown RBP6.89□□□□□ -1.31
NEDD8-207ENST00000533242 SLC25A32Q9H2D1 315 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 PPA2Q9H2U2 334 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 SHPKQ9UHJ6 478 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 AK3Q9UIJ7 227 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 LOC105371242A0A075B767 164 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 J3QLI3 93 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 GEMIN2O14893 280 aaKnown RBP6.89□□□□□ -1.31
NEDD8-207ENST00000533242 WNT9BO14905 357 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 SERPINA5P05154 406 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 HOXB5P09067 269 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 CST2P09228 141 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 HKR1P10072 659 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 CCL2P13500 99 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 CPT2P23786 658 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 AKR1C2P52895 323 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 TAS2R31P59538 309 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 FAM3AP98173 230 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 DEFA6Q01524 100 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 AKR1C1Q04828 323 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 IL15RAQ13261 267 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 ACTBL2Q562R1 376 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 MDP1Q86V88 176 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 EIF4E3Q8N5X7 224 aaKnown RBP6.89□□□□□ -1.31
NEDD8-207ENST00000533242 OR52H1Q8NGJ2 320 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 ZNF2Q9BSG1 426 aaPredicted RBP6.89□□□□□ -1.31
NEDD8-207ENST00000533242 NMES1Q9C002 83 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 OR2H1Q9GZK4 316 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 GPR35Q9HC97 309 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 PLEKHJ1Q9NW61 149 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 GHRLQ9UBU3 117 aa6.89□□□□□ -1.31
NEDD8-207ENST00000533242 hCG_38984A0A1B0GV85 526 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 SERPINE3A8MV23 424 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 F8VVB4 439 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 F8VWA3 439 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 PPIHO43447 177 aaKnown RBP6.88□□□□□ -1.31
NEDD8-207ENST00000533242 MTRF1O75570 445 aaKnown RBP6.88□□□□□ -1.31
NEDD8-207ENST00000533242 AVPP01185 164 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 MMP7P09237 267 aaPredicted RBP6.88□□□□□ -1.31
NEDD8-207ENST00000533242 GLRXP35754 106 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 SRSF3P84103 164 aaKnown RBP6.88□□□□□ -1.31
NEDD8-207ENST00000533242 MSMPQ1L6U9 139 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 TMEM42Q69YG0 159 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 CALHM1Q8IU99 346 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 POC1AQ8NBT0 407 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 INO80EQ8NBZ0 244 aaPredicted RBP6.88□□□□□ -1.31
NEDD8-207ENST00000533242 BPIFCQ8NFQ6 507 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 FGF23Q9GZV9 251 aaPredicted RBP6.88□□□□□ -1.31
NEDD8-207ENST00000533242 ESM1Q9NQ30 184 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 TEX13DA0A0J9YY54 714 aaPredicted RBP6.88□□□□□ -1.31
NEDD8-207ENST00000533242 APOC3P02656 99 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 CBX5P45973 191 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 TAS2R46P59540 309 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 RPS23P62266 143 aaKnown RBP6.88□□□□□ -1.31
NEDD8-207ENST00000533242 PAN3Q58A45 887 aaKnown RBP6.88□□□□□ -1.31
NEDD8-207ENST00000533242 FOXRED2Q8IWF2 684 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 OR10AD1Q8NGE0 317 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 TMED6Q8WW62 240 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 S100A13Q99584 98 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 ARPC5LQ9BPX5 153 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 ZNF665Q9H7R5 613 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 RAB18Q9NP72 206 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 GSKIPQ9P0R6 139 aa6.88□□□□□ -1.31
NEDD8-207ENST00000533242 KRBOX1C9JBD0 128 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 TSPAN4O14817 238 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 NRASP01111 189 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 FCGR3AP08637 254 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 CHATP28329 748 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 NPBWR2P48146 333 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 RIPPLY1Q0D2K3 151 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 RBM39Q14498 530 aaKnown RBP6.87□□□□□ -1.31
NEDD8-207ENST00000533242 RSU1Q15404 277 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 SP6Q3SY56 376 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 PABPC1L2AQ5JQF8 200 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 TREML4Q6UXN2 200 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 NANPQ8TBE9 248 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 C10orf35Q96D05 121 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 RAB39BQ96DA2 213 aa6.87□□□□□ -1.31
NEDD8-207ENST00000533242 SYT3Q9BQG1 590 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms