RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 BUB1B-PAK6H3BSN5 160 aa11.23□□□□□ -0.61
TSPAN4-220ENST00000532375 J3QR06 171 aa11.23□□□□□ -0.61
TSPAN4-220ENST00000532375 IGHV3-7P01780 117 aa11.23□□□□□ -0.61
TSPAN4-220ENST00000532375 NFYBP25208 207 aa11.23□□□□□ -0.61
TSPAN4-220ENST00000532375 HTR1DP28221 377 aa11.23□□□□□ -0.61
TSPAN4-220ENST00000532375 RPL15P61313 204 aaKnown RBP11.23□□□□□ -0.61
TSPAN4-220ENST00000532375 MOGAT2Q3SYC2 334 aa11.23□□□□□ -0.61
TSPAN4-220ENST00000532375 NKAPLQ5M9Q1 402 aa11.23□□□□□ -0.61
TSPAN4-220ENST00000532375 OR9G1Q8NH87 305 aa11.23□□□□□ -0.61
TSPAN4-220ENST00000532375 OR1L1Q8NH94 360 aa11.23□□□□□ -0.61
TSPAN4-220ENST00000532375 KCTD7Q96MP8 289 aa11.23□□□□□ -0.61
TSPAN4-220ENST00000532375 NEDD4LQ96PU5 975 aa11.23□□□□□ -0.61
TSPAN4-220ENST00000532375 URM1Q9BTM9 101 aaKnown RBP11.23□□□□□ -0.61
TSPAN4-220ENST00000532375 LIN7BQ9HAP6 207 aa11.23□□□□□ -0.61
TSPAN4-220ENST00000532375 DPM3Q9P2X0 92 aa11.23□□□□□ -0.61
TSPAN4-220ENST00000532375 RAB22AQ9UL26 194 aa11.23□□□□□ -0.61
TSPAN4-220ENST00000532375 TRBV6-6A0A0A6YYG2 114 aa11.22□□□□□ -0.61
TSPAN4-220ENST00000532375 RAB27BO00194 218 aa11.22□□□□□ -0.61
TSPAN4-220ENST00000532375 NDUFA7O95182 113 aa11.22□□□□□ -0.61
TSPAN4-220ENST00000532375 TGFBR1P36897 503 aa11.22□□□□□ -0.61
TSPAN4-220ENST00000532375 VEGFCP49767 419 aa11.22□□□□□ -0.61
TSPAN4-220ENST00000532375 FOXL1Q12952 345 aa11.22□□□□□ -0.61
TSPAN4-220ENST00000532375 LTC4SQ16873 150 aa11.22□□□□□ -0.61
TSPAN4-220ENST00000532375 FBLN7Q53RD9 439 aa11.22□□□□□ -0.61
TSPAN4-220ENST00000532375 GDPGP1Q6ZNW5 385 aa11.22□□□□□ -0.61
TSPAN4-220ENST00000532375 Q6ZSV7 163 aa11.22□□□□□ -0.61
TSPAN4-220ENST00000532375 ZNF554Q86TJ5 538 aa11.22□□□□□ -0.61
TSPAN4-220ENST00000532375 ZNF439Q8NDP4 499 aa11.22□□□□□ -0.61
TSPAN4-220ENST00000532375 PTX4Q96A99 478 aa11.22□□□□□ -0.61
TSPAN4-220ENST00000532375 ARHGAP5-AS1Q96IT6 56 aa11.22□□□□□ -0.61
TSPAN4-220ENST00000532375 MMP28Q9H239 520 aa11.22□□□□□ -0.61
TSPAN4-220ENST00000532375 TAF9BQ9HBM6 251 aa11.22□□□□□ -0.61
TSPAN4-220ENST00000532375 GFOD1Q9NXC2 390 aa11.22□□□□□ -0.61
TSPAN4-220ENST00000532375 TRAPPC2LQ9UL33 140 aa11.22□□□□□ -0.61
TSPAN4-220ENST00000532375 HILPDAQ9Y5L2 63 aa11.22□□□□□ -0.61
TSPAN4-220ENST00000532375 MMP24Q9Y5R2 645 aa11.22□□□□□ -0.61
TSPAN4-220ENST00000532375 LOC100506127A0A0U1RQW1 187 aa11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 A6NDX4 124 aa11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 CHST1O43916 411 aa11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 HBZP02008 142 aa11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 RAB6AP20340 208 aa11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 MDKP21741 143 aaPredicted RBP11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 ZNF134P52741 427 aa11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 PRRX1P54821 245 aa11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 DIAPH2-AS1Q14236 149 aa11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 HMGN3Q15651 99 aa11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 FAM189A2Q15884 450 aa11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 LY6EQ16553 131 aa11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 PLA1AQ53H76 456 aa11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 OLFML2AQ68BL7 652 aa11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 LINC00311Q8N616 119 aa11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 C8orf31Q8N9H6 132 aa11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 NDNFQ8TB73 568 aa11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 HDHD3Q9BSH5 251 aaPredicted RBP11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 PECRQ9BY49 303 aa11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 PLEKHJ1Q9NW61 149 aa11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 AK3Q9UIJ7 227 aa11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 TCF19Q9Y242 345 aa11.21□□□□□ -0.61
TSPAN4-220ENST00000532375 IGHV3-43A0A0B4J1X8 118 aa11.2□□□□□ -0.62
TSPAN4-220ENST00000532375 A0A1W2PPE3 182 aa11.2□□□□□ -0.62
TSPAN4-220ENST00000532375 LEUTXA8MZ59 168 aa11.2□□□□□ -0.62
TSPAN4-220ENST00000532375 TOR1AO14656 332 aa11.2□□□□□ -0.62
TSPAN4-220ENST00000532375 SLC31A2O15432 143 aa11.2□□□□□ -0.62
TSPAN4-220ENST00000532375 TSPAN9O75954 239 aa11.2□□□□□ -0.62
TSPAN4-220ENST00000532375 IGHV3-43DP0DP04 118 aa11.2□□□□□ -0.62
TSPAN4-220ENST00000532375 RANBP1P43487 201 aa11.2□□□□□ -0.62
TSPAN4-220ENST00000532375 Q3ZCU0 254 aa11.2□□□□□ -0.62
TSPAN4-220ENST00000532375 C6orf183Q5T699 404 aa11.2□□□□□ -0.62
TSPAN4-220ENST00000532375 TPTE2P1Q5T6R2 138 aa11.2□□□□□ -0.62
TSPAN4-220ENST00000532375 SFXN4Q6P4A7 337 aa11.2□□□□□ -0.62
TSPAN4-220ENST00000532375 TRAT1Q6PIZ9 186 aa11.2□□□□□ -0.62
TSPAN4-220ENST00000532375 C12orf54Q6X4T0 127 aa11.2□□□□□ -0.62
TSPAN4-220ENST00000532375 Q6ZTK2 550 aa11.2□□□□□ -0.62
TSPAN4-220ENST00000532375 OR56B1Q8NGI3 324 aa11.2□□□□□ -0.62
TSPAN4-220ENST00000532375 OR13F1Q8NGS4 319 aa11.2□□□□□ -0.62
TSPAN4-220ENST00000532375 LINC01006Q8NI28 216 aa11.2□□□□□ -0.62
TSPAN4-220ENST00000532375 ST6GALNAC6Q969X2 333 aa11.2□□□□□ -0.62
TSPAN4-220ENST00000532375 BTBD17A6NE02 478 aa11.19□□□□□ -0.62
TSPAN4-220ENST00000532375 FAM90A9PA6NNJ1 464 aa11.19□□□□□ -0.62
TSPAN4-220ENST00000532375 SDCBPO00560 298 aaPredicted RBP11.19□□□□□ -0.62
TSPAN4-220ENST00000532375 MFNGO00587 321 aa11.19□□□□□ -0.62
TSPAN4-220ENST00000532375 RAG2P55895 527 aa11.19□□□□□ -0.62
TSPAN4-220ENST00000532375 HTD2P86397 168 aa11.19□□□□□ -0.62
TSPAN4-220ENST00000532375 MXD1Q05195 221 aa11.19□□□□□ -0.62
TSPAN4-220ENST00000532375 CT45A1Q5HYN5 189 aa11.19□□□□□ -0.62
TSPAN4-220ENST00000532375 OR10R2Q8NGX6 335 aa11.19□□□□□ -0.62
TSPAN4-220ENST00000532375 CT45A3Q8NHU0 189 aa11.19□□□□□ -0.62
TSPAN4-220ENST00000532375 CREB3L1Q96BA8 519 aa11.19□□□□□ -0.62
TSPAN4-220ENST00000532375 OCSTAMPQ9BR26 566 aa11.19□□□□□ -0.62
TSPAN4-220ENST00000532375 RIMS4Q9H426 269 aaPredicted RBP11.19□□□□□ -0.62
TSPAN4-220ENST00000532375 C16orf95Q9H693 158 aa11.19□□□□□ -0.62
TSPAN4-220ENST00000532375 DAPK2Q9UIK4 370 aa11.19□□□□□ -0.62
TSPAN4-220ENST00000532375 A0A1W2PPI3 338 aa11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 OOSP1A8MZH6 123 aa11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 SPINT2O43291 252 aa11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 AIREO43918 545 aa11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 TFAP2AP05549 437 aa11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 SNRPBP14678 240 aaKnown RBP11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 CD24P25063 80 aa11.18□□□□□ -0.62
TSPAN4-220ENST00000532375 RPS19P39019 145 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms