RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 CATSPERDQ86XM0 798 aa13.73□□□□□ -0.21
PKP3-208ENST00000531857 LYSMD2Q8IV50 215 aa13.73□□□□□ -0.21
PKP3-208ENST00000531857 ZNF596Q8TC21 504 aa13.73□□□□□ -0.21
PKP3-208ENST00000531857 SIRPB1O00241 398 aa13.72□□□□□ -0.21
PKP3-208ENST00000531857 SYT7O43581 403 aa13.72□□□□□ -0.21
PKP3-208ENST00000531857 ZFPL1O95159 310 aa13.72□□□□□ -0.21
PKP3-208ENST00000531857 ISG15P05161 165 aa13.72□□□□□ -0.21
PKP3-208ENST00000531857 CLEC2LP0C7M8 214 aa13.72□□□□□ -0.21
PKP3-208ENST00000531857 PITPNAQ00169 270 aa13.72□□□□□ -0.21
PKP3-208ENST00000531857 ZNF146Q15072 292 aa13.72□□□□□ -0.21
PKP3-208ENST00000531857 TPTE2P1Q5T6R2 138 aa13.72□□□□□ -0.21
PKP3-208ENST00000531857 TMEM244Q5VVB8 128 aa13.72□□□□□ -0.21
PKP3-208ENST00000531857 OR52W1Q6IF63 320 aa13.72□□□□□ -0.21
PKP3-208ENST00000531857 FAM131AQ6UXB0 335 aa13.72□□□□□ -0.21
PKP3-208ENST00000531857 HEPN1Q6WQI6 88 aa13.72□□□□□ -0.21
PKP3-208ENST00000531857 RNF144BQ7Z419 303 aa13.72□□□□□ -0.21
PKP3-208ENST00000531857 FAM58AQ8N1B3 248 aa13.72□□□□□ -0.21
PKP3-208ENST00000531857 CCDC54Q8NEL0 328 aa13.72□□□□□ -0.21
PKP3-208ENST00000531857 BORCS8Q96FH0 119 aa13.72□□□□□ -0.21
PKP3-208ENST00000531857 SOSTQ9BQB4 213 aa13.72□□□□□ -0.21
PKP3-208ENST00000531857 GPR61Q9BZJ8 451 aa13.72□□□□□ -0.21
PKP3-208ENST00000531857 CHST5Q9GZS9 411 aa13.72□□□□□ -0.21
PKP3-208ENST00000531857 FRRS1LQ9P0K9 344 aa13.72□□□□□ -0.21
PKP3-208ENST00000531857 LY6LH3BQJ8 138 aa13.71□□□□□ -0.21
PKP3-208ENST00000531857 BUB1B-PAK6H3BSN5 160 aa13.71□□□□□ -0.21
PKP3-208ENST00000531857 UBCP0CG48 685 aaKnown RBP13.71□□□□□ -0.21
PKP3-208ENST00000531857 PRKACAP17612 351 aa13.71□□□□□ -0.21
PKP3-208ENST00000531857 CD34P28906 385 aa13.71□□□□□ -0.21
PKP3-208ENST00000531857 GLIPR1P48060 266 aa13.71□□□□□ -0.21
PKP3-208ENST00000531857 POU3F4P49335 361 aa13.71□□□□□ -0.21
PKP3-208ENST00000531857 ARHGDIBP52566 201 aa13.71□□□□□ -0.21
PKP3-208ENST00000531857 RPL23AP62750 156 aaKnown RBP13.71□□□□□ -0.21
PKP3-208ENST00000531857 HLA-DRB5Q30154 266 aa13.71□□□□□ -0.21
PKP3-208ENST00000531857 IDNKQ5T6J7 187 aa13.71□□□□□ -0.21
PKP3-208ENST00000531857 C8orf86Q6ZUL3 223 aa13.71□□□□□ -0.21
PKP3-208ENST00000531857 Q8IYB0 196 aa13.71□□□□□ -0.21
PKP3-208ENST00000531857 OR51D1Q8NGF3 324 aa13.71□□□□□ -0.21
PKP3-208ENST00000531857 NOL4LQ96MY1 436 aaPredicted RBP13.71□□□□□ -0.21
PKP3-208ENST00000531857 DERL3Q96Q80 235 aa13.71□□□□□ -0.21
PKP3-208ENST00000531857 SRRQ9GZT4 340 aa13.71□□□□□ -0.21
PKP3-208ENST00000531857 GAL3ST2Q9H3Q3 398 aa13.71□□□□□ -0.21
PKP3-208ENST00000531857 COMMD3Q9UBI1 195 aa13.71□□□□□ -0.21
PKP3-208ENST00000531857 CKLFQ9UBR5 152 aa13.71□□□□□ -0.21
PKP3-208ENST00000531857 SPATA2Q9UM82 520 aa13.71□□□□□ -0.21
PKP3-208ENST00000531857 ETV7Q9Y603 341 aa13.71□□□□□ -0.21
PKP3-208ENST00000531857 V9GYH0 126 aa13.71□□□□□ -0.21
PKP3-208ENST00000531857 TRGV10A0A0A0MS01 117 aa13.7□□□□□ -0.22
PKP3-208ENST00000531857 TRBV5-7A0A0A0MS05 114 aa13.7□□□□□ -0.22
PKP3-208ENST00000531857 PFDN1O60925 122 aa13.7□□□□□ -0.22
PKP3-208ENST00000531857 AESQ08117 197 aa13.7□□□□□ -0.22
PKP3-208ENST00000531857 OR2W3Q7Z3T1 314 aa13.7□□□□□ -0.22
PKP3-208ENST00000531857 LAX1Q8IWV1 398 aa13.7□□□□□ -0.22
PKP3-208ENST00000531857 CORO2AQ92828 525 aa13.7□□□□□ -0.22
PKP3-208ENST00000531857 PDCD1LG2Q9BQ51 273 aa13.7□□□□□ -0.22
PKP3-208ENST00000531857 MIXL1Q9H2W2 232 aa13.7□□□□□ -0.22
PKP3-208ENST00000531857 V9GY05 133 aa13.7□□□□□ -0.22
PKP3-208ENST00000531857 IGKV1-9A0A0C4DH69 117 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 FAM25AB3EWG3 89 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 FAM25CB3EWG5 89 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 FAM25GB3EWG6 89 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 M0QZK8 103 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 AIPO00170 330 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 TOR1AO14656 332 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 OR2H2O95918 312 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 CEACAM3P40198 252 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 OR3A4PP47883 348 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 RBP2P50120 134 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 ATP1B3P54709 279 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 NANOS3P60323 173 aaKnown RBP13.69□□□□□ -0.22
PKP3-208ENST00000531857 RBM39Q14498 530 aaKnown RBP13.69□□□□□ -0.22
PKP3-208ENST00000531857 SPIN3Q5JUX0 258 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 STEAP3Q658P3 488 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 PYHIN1Q6K0P9 492 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 RDH10Q8IZV5 341 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 PRSS35Q8N3Z0 413 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 POC5Q8NA72 575 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 RNF166Q96A37 237 aaPredicted RBP13.69□□□□□ -0.22
PKP3-208ENST00000531857 DUX3Q96PT4 197 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 OR14A2Q96R54 314 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 P2RX4Q99571 388 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 MCRIP2Q9BUT9 160 aaKnown RBP13.69□□□□□ -0.22
PKP3-208ENST00000531857 TAS2R3Q9NYW6 316 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 LINC00527Q9UJ94 153 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 MOB4Q9Y3A3 225 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 U3KQK5 164 aa13.69□□□□□ -0.22
PKP3-208ENST00000531857 IGKV1-12A0A0C4DH73 117 aa13.68□□□□□ -0.22
PKP3-208ENST00000531857 IGKV1D-12P01611 117 aa13.68□□□□□ -0.22
PKP3-208ENST00000531857 MTCP1P56278 107 aa13.68□□□□□ -0.22
PKP3-208ENST00000531857 DGCR2P98153 550 aa13.68□□□□□ -0.22
PKP3-208ENST00000531857 CNIH2Q6PI25 160 aa13.68□□□□□ -0.22
PKP3-208ENST00000531857 DNAAF1Q8NEP3 725 aa13.68□□□□□ -0.22
PKP3-208ENST00000531857 CREB3L1Q96BA8 519 aa13.68□□□□□ -0.22
PKP3-208ENST00000531857 ADAT3Q96EY9 351 aaPredicted RBP13.68□□□□□ -0.22
PKP3-208ENST00000531857 ING3Q9NXR8 418 aa13.68□□□□□ -0.22
PKP3-208ENST00000531857 GLS2Q9UI32 602 aa13.68□□□□□ -0.22
PKP3-208ENST00000531857 A0A087X0M5 115 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 LOC107986453A0A1B0GWG9 222 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 A0A1B0GX30 115 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 SHISA3A0PJX4 238 aa13.67□□□□□ -0.22
PKP3-208ENST00000531857 FAM90A18PA6NE21 464 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms