RNA–Protein interactions for RNA: ENST00000531733.1

FDFT1-220, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-220ENST00000531733 C12orf77C9JDV5 145 aa16.35■□□□□ 0.21
FDFT1-220ENST00000531733 SLC2A2P11168 524 aaPredicted RBP16.35■□□□□ 0.21
FDFT1-220ENST00000531733 VDAC1P21796 283 aa16.35■□□□□ 0.21
FDFT1-220ENST00000531733 GBX2P52951 348 aaPredicted RBP16.35■□□□□ 0.21
FDFT1-220ENST00000531733 CT45A1Q5HYN5 189 aa16.35■□□□□ 0.21
FDFT1-220ENST00000531733 ZNF497Q6ZNH5 498 aa16.35■□□□□ 0.21
FDFT1-220ENST00000531733 OR10V1Q8NGI7 309 aa16.35■□□□□ 0.21
FDFT1-220ENST00000531733 CT45A3Q8NHU0 189 aa16.35■□□□□ 0.21
FDFT1-220ENST00000531733 CPNE2Q96FN4 548 aaPredicted RBP16.35■□□□□ 0.21
FDFT1-220ENST00000531733 GMPPBQ9Y5P6 360 aa16.35■□□□□ 0.21
FDFT1-220ENST00000531733 SIRT4Q9Y6E7 314 aaPredicted RBP16.35■□□□□ 0.21
FDFT1-220ENST00000531733 MAGEA13PA6NCF6 341 aa16.34■□□□□ 0.21
FDFT1-220ENST00000531733 SNTNA6NMZ2 147 aa16.34■□□□□ 0.21
FDFT1-220ENST00000531733 H3BNX3 289 aa16.34■□□□□ 0.21
FDFT1-220ENST00000531733 RRP9O43818 475 aaKnown RBP16.34■□□□□ 0.21
FDFT1-220ENST00000531733 ORC5O43913 435 aa16.34■□□□□ 0.21
FDFT1-220ENST00000531733 FADS2O95864 444 aaKnown RBP16.34■□□□□ 0.21
FDFT1-220ENST00000531733 IGF1P05019 195 aa16.34■□□□□ 0.21
FDFT1-220ENST00000531733 LIMS3P0CW19 117 aa16.34■□□□□ 0.21
FDFT1-220ENST00000531733 LIMS4P0CW20 117 aa16.34■□□□□ 0.21
FDFT1-220ENST00000531733 MYF6P23409 242 aa16.34■□□□□ 0.21
FDFT1-220ENST00000531733 SOX6P35712 828 aa16.34■□□□□ 0.21
FDFT1-220ENST00000531733 ALDH3A2P51648 485 aa16.34■□□□□ 0.21
FDFT1-220ENST00000531733 DDI2Q5TDH0 399 aa16.34■□□□□ 0.21
FDFT1-220ENST00000531733 SLC25A48Q6ZT89 311 aaKnown RBP16.34■□□□□ 0.21
FDFT1-220ENST00000531733 C5orf24Q7Z6I8 188 aa16.34■□□□□ 0.21
FDFT1-220ENST00000531733 CBR4Q8N4T8 237 aa16.34■□□□□ 0.21
FDFT1-220ENST00000531733 RHOXF1Q8NHV9 184 aa16.34■□□□□ 0.21
FDFT1-220ENST00000531733 RITA1Q96K30 269 aa16.34■□□□□ 0.21
FDFT1-220ENST00000531733 OR5B12Q96R08 314 aa16.34■□□□□ 0.21
FDFT1-220ENST00000531733 LYSTQ99698 3801 aa16.34■□□□□ 0.21
FDFT1-220ENST00000531733 GAR1Q9NY12 217 aaKnown RBP16.34■□□□□ 0.21
FDFT1-220ENST00000531733 ORC6Q9Y5N6 252 aa16.34■□□□□ 0.21
FDFT1-220ENST00000531733 WSB1Q9Y6I7 421 aa16.34■□□□□ 0.21
FDFT1-220ENST00000531733 G3V318 75 aa16.33■□□□□ 0.2
FDFT1-220ENST00000531733 AIPO00170 330 aa16.33■□□□□ 0.2
FDFT1-220ENST00000531733 LY86O95711 162 aa16.33■□□□□ 0.2
FDFT1-220ENST00000531733 IL3RAP26951 378 aa16.33■□□□□ 0.2
FDFT1-220ENST00000531733 CHATP28329 748 aa16.33■□□□□ 0.2
FDFT1-220ENST00000531733 ZNF93P35789 620 aaPredicted RBP16.33■□□□□ 0.2
FDFT1-220ENST00000531733 ZNF137PP52743 207 aa16.33■□□□□ 0.2
FDFT1-220ENST00000531733 GNB1P62873 340 aa16.33■□□□□ 0.2
FDFT1-220ENST00000531733 MRPL28Q13084 256 aaKnown RBP16.33■□□□□ 0.2
FDFT1-220ENST00000531733 SBSPONQ8IVN8 264 aa16.33■□□□□ 0.2
FDFT1-220ENST00000531733 OR13C5Q8NGS8 318 aa16.33■□□□□ 0.2
FDFT1-220ENST00000531733 OR1L1Q8NH94 360 aa16.33■□□□□ 0.2
FDFT1-220ENST00000531733 GPR148Q8TDV2 347 aa16.33■□□□□ 0.2
FDFT1-220ENST00000531733 APH1BQ8WW43 257 aa16.33■□□□□ 0.2
FDFT1-220ENST00000531733 TMEM106AQ96A25 262 aa16.33■□□□□ 0.2
FDFT1-220ENST00000531733 STARD9Q9P2P6 4700 aa16.33■□□□□ 0.2
FDFT1-220ENST00000531733 I3L521 148 aa16.32■□□□□ 0.2
FDFT1-220ENST00000531733 CSTBP04080 98 aaKnown RBP16.32■□□□□ 0.2
FDFT1-220ENST00000531733 CNTFRP26992 372 aa16.32■□□□□ 0.2
FDFT1-220ENST00000531733 PPIFP30405 207 aaKnown RBP16.32■□□□□ 0.2
FDFT1-220ENST00000531733 RAB40BQ12829 278 aa16.32■□□□□ 0.2
FDFT1-220ENST00000531733 MPV17LQ2QL34 196 aa16.32■□□□□ 0.2
FDFT1-220ENST00000531733 KLHL22Q53GT1 634 aa16.32■□□□□ 0.2
FDFT1-220ENST00000531733 CASC10Q5T4H9 136 aa16.32■□□□□ 0.2
FDFT1-220ENST00000531733 SYT6Q5T7P8 510 aaPredicted RBP16.32■□□□□ 0.2
FDFT1-220ENST00000531733 ZNF491Q8N8L2 437 aa16.32■□□□□ 0.2
FDFT1-220ENST00000531733 OR8H1Q8NGG4 311 aa16.32■□□□□ 0.2
FDFT1-220ENST00000531733 OR4K15Q8NH41 348 aa16.32■□□□□ 0.2
FDFT1-220ENST00000531733 NEK7Q8TDX7 302 aa16.32■□□□□ 0.2
FDFT1-220ENST00000531733 TMEM138Q9NPI0 162 aa16.32■□□□□ 0.2
FDFT1-220ENST00000531733 ZNF107Q9UII5 783 aaPredicted RBP16.32■□□□□ 0.2
FDFT1-220ENST00000531733 ADARB1P78563 741 aaKnown RBP16.31■□□□□ 0.2
FDFT1-220ENST00000531733 LSAMPQ13449 338 aa16.31■□□□□ 0.2
FDFT1-220ENST00000531733 SLC22A6Q4U2R8 563 aa16.31■□□□□ 0.2
FDFT1-220ENST00000531733 OR2G6Q5TZ20 316 aa16.31■□□□□ 0.2
FDFT1-220ENST00000531733 OVCH2Q7RTZ1 564 aa16.31■□□□□ 0.2
FDFT1-220ENST00000531733 LINC00596Q86U02 117 aa16.31■□□□□ 0.2
FDFT1-220ENST00000531733 PRR18Q8N4B5 295 aa16.31■□□□□ 0.2
FDFT1-220ENST00000531733 OR1N2Q8NGR9 330 aa16.31■□□□□ 0.2
FDFT1-220ENST00000531733 MRPS18AQ9NVS2 196 aaKnown RBP16.31■□□□□ 0.2
FDFT1-220ENST00000531733 GNG12Q9UBI6 72 aa16.31■□□□□ 0.2
FDFT1-220ENST00000531733 SMAD5-AS1Q9Y6J3 95 aa16.31■□□□□ 0.2
FDFT1-220ENST00000531733 SORL1Q92673 2214 aa16.31■□□□□ 0.2
FDFT1-220ENST00000531733 ATP6V0E1O15342 81 aa16.3■□□□□ 0.2
FDFT1-220ENST00000531733 HBZP02008 142 aa16.3■□□□□ 0.2
FDFT1-220ENST00000531733 BDKRB2P30411 391 aa16.3■□□□□ 0.2
FDFT1-220ENST00000531733 ETV1P50549 477 aa16.3■□□□□ 0.2
FDFT1-220ENST00000531733 GNMTQ14749 295 aa16.3■□□□□ 0.2
FDFT1-220ENST00000531733 SMN1Q16637 294 aaKnown RBP16.3■□□□□ 0.2
FDFT1-220ENST00000531733 Q3ZCU0 254 aa16.3■□□□□ 0.2
FDFT1-220ENST00000531733 MUC7Q8TAX7 377 aa16.3■□□□□ 0.2
FDFT1-220ENST00000531733 RCHY1Q96PM5 261 aa16.3■□□□□ 0.2
FDFT1-220ENST00000531733 MYCBPQ99417 103 aaPredicted RBP16.3■□□□□ 0.2
FDFT1-220ENST00000531733 ZNF184Q99676 751 aaPredicted RBP16.3■□□□□ 0.2
FDFT1-220ENST00000531733 ALX4Q9H161 411 aaPredicted RBP16.3■□□□□ 0.2
FDFT1-220ENST00000531733 RCC2Q9P258 522 aaKnown RBP16.3■□□□□ 0.2
FDFT1-220ENST00000531733 ZNF580Q9UK33 172 aa16.3■□□□□ 0.2
FDFT1-220ENST00000531733 CSMD3Q7Z407 3707 aa16.3■□□□□ 0.2
FDFT1-220ENST00000531733 BIRC6Q9NR09 4857 aa16.3■□□□□ 0.2
FDFT1-220ENST00000531733 TXNL1O43396 289 aa16.29■□□□□ 0.2
FDFT1-220ENST00000531733 CIB2O75838 187 aa16.29■□□□□ 0.2
FDFT1-220ENST00000531733 LALBAP00709 142 aa16.29■□□□□ 0.2
FDFT1-220ENST00000531733 IGLV1-40P01703 118 aa16.29■□□□□ 0.2
FDFT1-220ENST00000531733 CD2P06729 351 aa16.29■□□□□ 0.2
FDFT1-220ENST00000531733 IGFBP3P17936 291 aaPredicted RBP16.29■□□□□ 0.2
FDFT1-220ENST00000531733 RCC1P18754 421 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms