RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 EGR1P18146 543 aa12.17□□□□□ -0.46
PCF11-204ENST00000530660 IL11P20809 199 aa12.17□□□□□ -0.46
PCF11-204ENST00000530660 BMP5P22003 454 aa12.17□□□□□ -0.46
PCF11-204ENST00000530660 EPHA8P29322 1005 aaPredicted RBP12.17□□□□□ -0.46
PCF11-204ENST00000530660 MDH2P40926 338 aaKnown RBP12.17□□□□□ -0.46
PCF11-204ENST00000530660 HCRTR1O43613 425 aa12.17□□□□□ -0.46
PCF11-204ENST00000530660 CRISP2P16562 243 aa12.17□□□□□ -0.46
PCF11-204ENST00000530660 CDC34P49427 236 aaPredicted RBP12.17□□□□□ -0.46
PCF11-204ENST00000530660 PAX9P55771 341 aa12.17□□□□□ -0.46
PCF11-204ENST00000530660 PPP1CBP62140 327 aa12.17□□□□□ -0.46
PCF11-204ENST00000530660 CRIP3Q6Q6R5 217 aa12.17□□□□□ -0.46
PCF11-204ENST00000530660 ZFYVE21Q9BQ24 234 aa12.17□□□□□ -0.46
PCF11-204ENST00000530660 REPIN1Q9BWE0 567 aaKnown RBP12.17□□□□□ -0.46
PCF11-204ENST00000530660 C3orf85A0A1B0GTC6 90 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 IFNA1P01562 189 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 SGCBQ16585 318 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 ZNF468Q5VIY5 522 aaPredicted RBP12.16□□□□□ -0.46
PCF11-204ENST00000530660 ZNF695Q8IW36 515 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 ABHD3Q8WU67 409 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 A0A1W2PRS3 328 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 C5orf63A6NC05 138 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 PGPEP1LA6NFU8 196 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 LHX2P50458 406 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 BLKP51451 505 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 TMEM144Q7Z5S9 345 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 OR8B12Q8NGG6 310 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 SGMS2Q8NHU3 365 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 MEGF9Q9H1U4 602 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 UBE2J1Q9Y385 318 aaPredicted RBP12.16□□□□□ -0.46
PCF11-204ENST00000530660 B4DGG1 531 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 BAXQ07812 192 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 HYAL1Q12794 435 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 GAB4Q2WGN9 574 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 TMEM108Q6UXF1 575 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 SIGLECL1Q8N7X8 197 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 SCGB1C1Q8TD33 95 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 SIGLEC12Q96PQ1 595 aa12.16□□□□□ -0.46
PCF11-204ENST00000530660 TRAV36DV7A0A075B6V5 113 aa12.15□□□□□ -0.46
PCF11-204ENST00000530660 SMPD2O60906 423 aa12.15□□□□□ -0.46
PCF11-204ENST00000530660 WDR1O75083 606 aa12.15□□□□□ -0.46
PCF11-204ENST00000530660 NBEAP1P0C6P0 100 aa12.15□□□□□ -0.46
PCF11-204ENST00000530660 MPLP40238 635 aa12.15□□□□□ -0.46
PCF11-204ENST00000530660 FNDC7Q5VTL7 733 aa12.15□□□□□ -0.46
PCF11-204ENST00000530660 PRR27Q6MZM9 219 aa12.15□□□□□ -0.46
PCF11-204ENST00000530660 TNFRSF14Q92956 283 aa12.15□□□□□ -0.46
PCF11-204ENST00000530660 PINX1Q96BK5 328 aaKnown RBP12.15□□□□□ -0.46
PCF11-204ENST00000530660 VWCEQ96DN2 955 aa12.15□□□□□ -0.46
PCF11-204ENST00000530660 MED29Q9NX70 200 aa12.15□□□□□ -0.46
PCF11-204ENST00000530660 TP73-AS1Q9UF72 201 aa12.15□□□□□ -0.46
PCF11-204ENST00000530660 SH3BGRL2Q9UJC5 107 aa12.15□□□□□ -0.46
PCF11-204ENST00000530660 DIDO1Q9BTC0 2240 aaKnown RBP12.15□□□□□ -0.46
PCF11-204ENST00000530660 ZP4Q12836 540 aa12.15□□□□□ -0.46
PCF11-204ENST00000530660 DEFB110Q30KQ9 67 aa12.15□□□□□ -0.46
PCF11-204ENST00000530660 PRR22Q8IZ63 422 aa12.15□□□□□ -0.46
PCF11-204ENST00000530660 C11orf40Q8WZ69 217 aa12.15□□□□□ -0.46
PCF11-204ENST00000530660 SLC35D1Q9NTN3 355 aa12.15□□□□□ -0.46
PCF11-204ENST00000530660 SLC31A1O15431 190 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 SAP30O75446 220 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 OPN1LWP04000 364 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 C1QTNF9P0C862 333 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 TLE3Q04726 772 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 SNAI3Q3KNW1 292 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 SLC39A9Q9NUM3 307 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 ELOVL5Q9NYP7 299 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 OR6C6A6NF89 314 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 MPPED1O15442 326 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 IGKV1D-33P01593 117 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 IGKV1-33P01594 117 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 CST6Q15828 149 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 OR4A47Q6IF82 309 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 PIGTQ969N2 578 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 APOOQ9BUR5 198 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 TMEM222Q9H0R3 208 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 TBL2Q9Y4P3 447 aaKnown RBP12.14□□□□□ -0.47
PCF11-204ENST00000530660 CPAMD8Q8IZJ3 1885 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 RALGAPA1Q6GYQ0 2036 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 OR5B21A6NL26 309 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 E9PLN8 166 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 HS3ST1O14792 307 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 TNFSF14O43557 240 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 FRMD6-AS1P0C7T7 363 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 FCGR2AP12318 317 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 ZNF121P58317 390 aaPredicted RBP12.14□□□□□ -0.47
PCF11-204ENST00000530660 POU3F1Q03052 451 aaPredicted RBP12.14□□□□□ -0.47
PCF11-204ENST00000530660 IZUMO4Q1ZYL8 232 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 RSPO4Q2I0M5 234 aaPredicted RBP12.14□□□□□ -0.47
PCF11-204ENST00000530660 RPP25LQ8N5L8 163 aaKnown RBP12.14□□□□□ -0.47
PCF11-204ENST00000530660 WFDC12Q8WWY7 111 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 EMC6Q9BV81 110 aa12.14□□□□□ -0.47
PCF11-204ENST00000530660 CHD7Q9P2D1 2997 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 NPIPA2E9PIF3 369 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 PLPP3O14495 311 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 PGCP20142 388 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 BMI1P35226 326 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 PSMB3P49720 205 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 ID3Q02535 119 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 ARL16Q0P5N6 197 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 KIR2DS3Q14952 304 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 OR14C36Q8NHC7 312 aa12.13□□□□□ -0.47
PCF11-204ENST00000530660 ZNF501Q96CX3 271 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms