RNA–Protein interactions for RNA: ENST00000530468.5

TM9SF1-209, Transcript of transmembrane 9 superfamily member 1, human

TSL 2

Gene TM9SF1, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM9SF1-209	ENST00000530468	ZFP1	Q6P2D0	407 aa		12.21	□□□□□ -0.45
TM9SF1-209	ENST00000530468	ZNF497	Q6ZNH5	498 aa		12.21	□□□□□ -0.45
TM9SF1-209	ENST00000530468	STX19	Q8N4C7	294 aa		12.21	□□□□□ -0.45
TM9SF1-209	ENST00000530468	CBR4	Q8N4T8	237 aa		12.21	□□□□□ -0.45
TM9SF1-209	ENST00000530468	C4orf3	Q8WVX3	66 aa		12.21	□□□□□ -0.45
TM9SF1-209	ENST00000530468	ZNF580	Q9UK33	172 aa		12.21	□□□□□ -0.45
TM9SF1-209	ENST00000530468	SEC14L6	B5MCN3	397 aa		12.2	□□□□□ -0.46
TM9SF1-209	ENST00000530468		H3BNX3	289 aa		12.2	□□□□□ -0.46
TM9SF1-209	ENST00000530468	AIP	O00170	330 aa		12.2	□□□□□ -0.46
TM9SF1-209	ENST00000530468	OR5H8	P0DN80	308 aa		12.2	□□□□□ -0.46
TM9SF1-209	ENST00000530468	GTF2F2	P13984	249 aa		12.2	□□□□□ -0.46
TM9SF1-209	ENST00000530468	BDKRB2	P30411	391 aa		12.2	□□□□□ -0.46
TM9SF1-209	ENST00000530468	SOX6	P35712	828 aa		12.2	□□□□□ -0.46
TM9SF1-209	ENST00000530468	ZNF137P	P52743	207 aa		12.2	□□□□□ -0.46
TM9SF1-209	ENST00000530468	CFHR3	Q02985	330 aa		12.2	□□□□□ -0.46
TM9SF1-209	ENST00000530468	SLC25A48	Q6ZT89	311 aa	Known RBP	12.2	□□□□□ -0.46
TM9SF1-209	ENST00000530468	FAM71E2	Q8N5Q1	922 aa		12.2	□□□□□ -0.46
TM9SF1-209	ENST00000530468	CCDC107	Q8WV48	283 aa		12.2	□□□□□ -0.46
TM9SF1-209	ENST00000530468	CHCHD6	Q9BRQ6	235 aa		12.2	□□□□□ -0.46
TM9SF1-209	ENST00000530468	SPACA1	Q9HBV2	294 aa		12.2	□□□□□ -0.46
TM9SF1-209	ENST00000530468	IGHV3-43	A0A0B4J1X8	118 aa		12.19	□□□□□ -0.46
TM9SF1-209	ENST00000530468	SPINT2	O43291	252 aa		12.19	□□□□□ -0.46
TM9SF1-209	ENST00000530468	MT-ND4	P03905	459 aa		12.19	□□□□□ -0.46
TM9SF1-209	ENST00000530468	IGF1	P05019	195 aa		12.19	□□□□□ -0.46
TM9SF1-209	ENST00000530468	LIMS3	P0CW19	117 aa		12.19	□□□□□ -0.46
TM9SF1-209	ENST00000530468	LIMS4	P0CW20	117 aa		12.19	□□□□□ -0.46
TM9SF1-209	ENST00000530468	IGHV3-43D	P0DP04	118 aa		12.19	□□□□□ -0.46
TM9SF1-209	ENST00000530468	ECI1	P42126	302 aa		12.19	□□□□□ -0.46
TM9SF1-209	ENST00000530468	RIPK1	Q13546	671 aa		12.19	□□□□□ -0.46
TM9SF1-209	ENST00000530468	FHL3	Q13643	280 aa		12.19	□□□□□ -0.46
TM9SF1-209	ENST00000530468	GPR176	Q14439	515 aa		12.19	□□□□□ -0.46
TM9SF1-209	ENST00000530468	C6orf183	Q5T699	404 aa		12.19	□□□□□ -0.46
TM9SF1-209	ENST00000530468	UBALD1	Q8TB05	177 aa		12.19	□□□□□ -0.46
TM9SF1-209	ENST00000530468	PRR25	Q96S07	402 aa		12.19	□□□□□ -0.46
TM9SF1-209	ENST00000530468	HSPB9	Q9BQS6	159 aa		12.19	□□□□□ -0.46
TM9SF1-209	ENST00000530468	C9orf16	Q9BUW7	83 aa		12.19	□□□□□ -0.46
TM9SF1-209	ENST00000530468	FGF20	Q9NP95	211 aa	Predicted RBP	12.19	□□□□□ -0.46
TM9SF1-209	ENST00000530468	LOC100130705	A0A1B0GUX0	176 aa		12.18	□□□□□ -0.46
TM9SF1-209	ENST00000530468	C12orf77	C9JDV5	145 aa		12.18	□□□□□ -0.46
TM9SF1-209	ENST00000530468	PSMB8	P28062	276 aa		12.18	□□□□□ -0.46
TM9SF1-209	ENST00000530468	INSL3	P51460	131 aa		12.18	□□□□□ -0.46
TM9SF1-209	ENST00000530468	SLC22A6	Q4U2R8	563 aa		12.18	□□□□□ -0.46
TM9SF1-209	ENST00000530468	NKAPL	Q5M9Q1	402 aa		12.18	□□□□□ -0.46
TM9SF1-209	ENST00000530468	XAF1	Q6GPH4	301 aa		12.18	□□□□□ -0.46
TM9SF1-209	ENST00000530468	TRAT1	Q6PIZ9	186 aa		12.18	□□□□□ -0.46
TM9SF1-209	ENST00000530468	TMPRSS11A	Q6ZMR5	421 aa		12.18	□□□□□ -0.46
TM9SF1-209	ENST00000530468	ZNF439	Q8NDP4	499 aa		12.18	□□□□□ -0.46
TM9SF1-209	ENST00000530468	KCTD7	Q96MP8	289 aa		12.18	□□□□□ -0.46
TM9SF1-209	ENST00000530468	RCC2	Q9P258	522 aa	Known RBP	12.18	□□□□□ -0.46
TM9SF1-209	ENST00000530468	GNG12	Q9UBI6	72 aa		12.18	□□□□□ -0.46
TM9SF1-209	ENST00000530468	SCOC	Q9UIL1	159 aa		12.18	□□□□□ -0.46
TM9SF1-209	ENST00000530468	TRAPPC2L	Q9UL33	140 aa		12.18	□□□□□ -0.46
TM9SF1-209	ENST00000530468	TENM3	Q9P273	2699 aa		12.17	□□□□□ -0.46
TM9SF1-209	ENST00000530468	ZNF736	B4DX44	427 aa	Predicted RBP	12.17	□□□□□ -0.46
TM9SF1-209	ENST00000530468	MCRIP1	C9JLW8	97 aa		12.17	□□□□□ -0.46
TM9SF1-209	ENST00000530468	SLC31A2	O15432	143 aa		12.17	□□□□□ -0.46
TM9SF1-209	ENST00000530468	DCK	P27707	260 aa		12.17	□□□□□ -0.46
TM9SF1-209	ENST00000530468	F2RL1	P55085	397 aa		12.17	□□□□□ -0.46
TM9SF1-209	ENST00000530468	SYT6	Q5T7P8	510 aa	Predicted RBP	12.17	□□□□□ -0.46
TM9SF1-209	ENST00000530468	STEAP3	Q658P3	488 aa		12.17	□□□□□ -0.46
TM9SF1-209	ENST00000530468	FAM53A	Q6NSI3	398 aa	Predicted RBP	12.17	□□□□□ -0.46
TM9SF1-209	ENST00000530468	MYOZ3	Q8TDC0	251 aa		12.17	□□□□□ -0.46
TM9SF1-209	ENST00000530468	APH1B	Q8WW43	257 aa		12.17	□□□□□ -0.46
TM9SF1-209	ENST00000530468	SMIM19	Q96E16	107 aa		12.17	□□□□□ -0.46
TM9SF1-209	ENST00000530468	MRPS24	Q96EL2	167 aa	Known RBP	12.17	□□□□□ -0.46
TM9SF1-209	ENST00000530468	ZNF184	Q99676	751 aa	Predicted RBP	12.17	□□□□□ -0.46
TM9SF1-209	ENST00000530468	CHCHD3	Q9NX63	227 aa	Known RBP	12.17	□□□□□ -0.46
TM9SF1-209	ENST00000530468	ETAA1	Q9NY74	926 aa		12.17	□□□□□ -0.46
TM9SF1-209	ENST00000530468	CKLF	Q9UBR5	152 aa		12.17	□□□□□ -0.46
TM9SF1-209	ENST00000530468	ZNF107	Q9UII5	783 aa	Predicted RBP	12.17	□□□□□ -0.46
TM9SF1-209	ENST00000530468	ZNF256	Q9Y2P7	627 aa	Predicted RBP	12.17	□□□□□ -0.46
TM9SF1-209	ENST00000530468		A0A1W2PP11	408 aa		12.16	□□□□□ -0.46
TM9SF1-209	ENST00000530468	C3orf84	H3BNL1	204 aa		12.16	□□□□□ -0.46
TM9SF1-209	ENST00000530468	OGG1	O15527	345 aa		12.16	□□□□□ -0.46
TM9SF1-209	ENST00000530468	LANCL1	O43813	399 aa		12.16	□□□□□ -0.46
TM9SF1-209	ENST00000530468	CA11	O75493	328 aa		12.16	□□□□□ -0.46
TM9SF1-209	ENST00000530468	GPX5	O75715	221 aa		12.16	□□□□□ -0.46
TM9SF1-209	ENST00000530468	OR8U8	P0C7N1	319 aa		12.16	□□□□□ -0.46
TM9SF1-209	ENST00000530468	IGFBP3	P17936	291 aa	Predicted RBP	12.16	□□□□□ -0.46
TM9SF1-209	ENST00000530468	CHAT	P28329	748 aa		12.16	□□□□□ -0.46
TM9SF1-209	ENST00000530468	VHL	P40337	213 aa		12.16	□□□□□ -0.46
TM9SF1-209	ENST00000530468	ZNF260	Q3ZCT1	412 aa		12.16	□□□□□ -0.46
TM9SF1-209	ENST00000530468	CT45A1	Q5HYN5	189 aa		12.16	□□□□□ -0.46
TM9SF1-209	ENST00000530468	GAPT	Q8N292	157 aa		12.16	□□□□□ -0.46
TM9SF1-209	ENST00000530468	OR11H1	Q8NG94	326 aa		12.16	□□□□□ -0.46
TM9SF1-209	ENST00000530468	CT45A3	Q8NHU0	189 aa		12.16	□□□□□ -0.46
TM9SF1-209	ENST00000530468	UBE2E2	Q96LR5	201 aa		12.16	□□□□□ -0.46
TM9SF1-209	ENST00000530468	TRBV5-5	A0A0J9YX44	114 aa		12.15	□□□□□ -0.46
TM9SF1-209	ENST00000530468	IRGM	A1A4Y4	181 aa		12.15	□□□□□ -0.46
TM9SF1-209	ENST00000530468	HBZ	P02008	142 aa		12.15	□□□□□ -0.46
TM9SF1-209	ENST00000530468	ETV1	P50549	477 aa		12.15	□□□□□ -0.46
TM9SF1-209	ENST00000530468	ZNF134	P52741	427 aa		12.15	□□□□□ -0.46
TM9SF1-209	ENST00000530468	RUNX1	Q01196	453 aa		12.15	□□□□□ -0.46
TM9SF1-209	ENST00000530468	LSAMP	Q13449	338 aa		12.15	□□□□□ -0.46
TM9SF1-209	ENST00000530468	MMD	Q15546	238 aa		12.15	□□□□□ -0.46
TM9SF1-209	ENST00000530468		Q499Y3	187 aa		12.15	□□□□□ -0.46
TM9SF1-209	ENST00000530468	OR2G6	Q5TZ20	316 aa		12.15	□□□□□ -0.46
TM9SF1-209	ENST00000530468	TMEM65	Q6PI78	240 aa		12.15	□□□□□ -0.46
TM9SF1-209	ENST00000530468	PRR18	Q8N4B5	295 aa		12.15	□□□□□ -0.46
TM9SF1-209	ENST00000530468	OR10V1	Q8NGI7	309 aa		12.15	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms