RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 CREB3L1Q96BA8 519 aa10.23□□□□□ -0.77
CCDC90B-216ENST00000529856 CHCHD6Q9BRQ6 235 aa10.23□□□□□ -0.77
CCDC90B-216ENST00000529856 MMP28Q9H239 520 aa10.23□□□□□ -0.77
CCDC90B-216ENST00000529856 VCX3AQ9NNX9 186 aa10.23□□□□□ -0.77
CCDC90B-216ENST00000529856 MBNL3Q9NUK0 354 aaKnown RBP10.23□□□□□ -0.77
CCDC90B-216ENST00000529856 PLEKHJ1Q9NW61 149 aa10.23□□□□□ -0.77
CCDC90B-216ENST00000529856 PSG11Q9UQ72 335 aa10.23□□□□□ -0.77
CCDC90B-216ENST00000529856 LOC100506127A0A0U1RQW1 187 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 TRIM64CA6NLI5 447 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 NOTOA8MTQ0 251 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 LY6LH3BQJ8 138 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 F2RL2O00254 374 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 SPINT2O43291 252 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 IGHV3-7P01780 117 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 JUNBP17275 347 aaPredicted RBP10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 RCC1P18754 421 aaPredicted RBP10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 RAG2P55895 527 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 TMEM50BP56557 158 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 LOXL3P58215 753 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 PLA2G7Q13093 441 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 LY6EQ16553 131 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 PLA1AQ53H76 456 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 C3orf56Q8N813 242 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 OR4F5Q8NH21 305 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 UBALD1Q8TB05 177 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 KCTD7Q96MP8 289 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 RNF167Q9H6Y7 350 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 LIN7BQ9HAP6 207 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 RAB9BQ9NP90 201 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 ABCB10Q9NRK6 738 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 HSF4Q9ULV5 492 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 MMP24Q9Y5R2 645 aa10.22□□□□□ -0.77
CCDC90B-216ENST00000529856 TENM1Q9UKZ4 2725 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 A0A0B4J203 849 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 A0A1B0GUS0 222 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 SMIM30A4D0T7 59 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 POM121CA8CG34 1229 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 SDCBPO00560 298 aaPredicted RBP10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 NAPSAO96009 420 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 HBZP02008 142 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 SLC2A2P11168 524 aaPredicted RBP10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 MDKP21741 143 aaPredicted RBP10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 SDC2P34741 201 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 CEACAM3P40198 252 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 VEGFCP49767 419 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 EFNB2P52799 333 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 TMEM30BQ3MIR4 351 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 TPTE2P1Q5T6R2 138 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 DHRS7BQ6IAN0 325 aaPredicted RBP10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 LIAT1Q6ZQX7 453 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 Q6ZTK2 550 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 ZNF554Q86TJ5 538 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 OR56B1Q8NGI3 324 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 OR1L1Q8NH94 360 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 PTX4Q96A99 478 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 YIPF6Q96EC8 236 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 CENPOQ9BU64 300 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 TAF9BQ9HBM6 251 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 GFOD1Q9NXC2 390 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 KCNIP1Q9NZI2 227 aa10.21□□□□□ -0.77
CCDC90B-216ENST00000529856 TRBV6-6A0A0A6YYG2 114 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 A6NDX4 124 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 OOSP1A8MZH6 123 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 TSPAN9O75954 239 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 RAB6AP20340 208 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 GNG10P50151 68 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 TIMM50Q3ZCQ8 353 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 PLAC9Q5JTB6 97 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 FAM53AQ6NSI3 398 aaPredicted RBP10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 ZNF880Q6PDB4 577 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 CCBE1Q6UXH8 406 aaPredicted RBP10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 Q6ZSV7 163 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 PRR18Q8N4B5 295 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 LINC00311Q8N616 119 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 C8orf31Q8N9H6 132 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 ARHGAP5-AS1Q96IT6 56 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 ZNF747Q9BV97 191 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 PECRQ9BY49 303 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 RIMS4Q9H426 269 aaPredicted RBP10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 C16orf95Q9H693 158 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 BEX1Q9HBH7 125 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 RAB18Q9NP72 206 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 AK3Q9UIJ7 227 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 PITPNC1Q9UKF7 332 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 TCF19Q9Y242 345 aa10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 AMMECR1Q9Y4X0 333 aaPredicted RBP10.2□□□□□ -0.78
CCDC90B-216ENST00000529856 IGHV3-43A0A0B4J1X8 118 aa10.19□□□□□ -0.78
CCDC90B-216ENST00000529856 A0A1W2PPE3 182 aa10.19□□□□□ -0.78
CCDC90B-216ENST00000529856 CLPSL1A2RUU4 121 aa10.19□□□□□ -0.78
CCDC90B-216ENST00000529856 CLEC2LP0C7M8 214 aa10.19□□□□□ -0.78
CCDC90B-216ENST00000529856 IGHV3-43DP0DP04 118 aa10.19□□□□□ -0.78
CCDC90B-216ENST00000529856 BRS3P32247 399 aa10.19□□□□□ -0.78
CCDC90B-216ENST00000529856 MXD1Q05195 221 aa10.19□□□□□ -0.78
CCDC90B-216ENST00000529856 MADCAM1Q13477 382 aa10.19□□□□□ -0.78
CCDC90B-216ENST00000529856 HMGN3Q15651 99 aa10.19□□□□□ -0.78
CCDC90B-216ENST00000529856 MOGAT2Q3SYC2 334 aa10.19□□□□□ -0.78
CCDC90B-216ENST00000529856 Q3ZCU0 254 aa10.19□□□□□ -0.78
CCDC90B-216ENST00000529856 CCDC144NLQ6NUI1 221 aa10.19□□□□□ -0.78
CCDC90B-216ENST00000529856 SFXN4Q6P4A7 337 aa10.19□□□□□ -0.78
CCDC90B-216ENST00000529856 Q6ZPA2 131 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms