RNA–Protein interactions for RNA: ENST00000529566.1

TSPAN4-218, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 706 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-218ENST00000529566 Q6ZPA2 131 aa12.99□□□□□ -0.33
TSPAN4-218ENST00000529566 OR52M1Q8NGK5 317 aa12.99□□□□□ -0.33
TSPAN4-218ENST00000529566 UBALD1Q8TB05 177 aa12.99□□□□□ -0.33
TSPAN4-218ENST00000529566 NDNFQ8TB73 568 aa12.99□□□□□ -0.33
TSPAN4-218ENST00000529566 TRAPPC2LQ9UL33 140 aa12.99□□□□□ -0.33
TSPAN4-218ENST00000529566 SSR3Q9UNL2 185 aa12.99□□□□□ -0.33
TSPAN4-218ENST00000529566 A6NDX4 124 aa12.98□□□□□ -0.33
TSPAN4-218ENST00000529566 LEUTXA8MZ59 168 aa12.98□□□□□ -0.33
TSPAN4-218ENST00000529566 TOR1AO14656 332 aa12.98□□□□□ -0.33
TSPAN4-218ENST00000529566 CHST1O43916 411 aa12.98□□□□□ -0.33
TSPAN4-218ENST00000529566 NAPSAO96009 420 aa12.98□□□□□ -0.33
TSPAN4-218ENST00000529566 CD36P16671 472 aa12.98□□□□□ -0.33
TSPAN4-218ENST00000529566 EFNB2P52799 333 aa12.98□□□□□ -0.33
TSPAN4-218ENST00000529566 Q6ZSV7 163 aa12.98□□□□□ -0.33
TSPAN4-218ENST00000529566 C5orf24Q7Z6I8 188 aa12.98□□□□□ -0.33
TSPAN4-218ENST00000529566 URM1Q9BTM9 101 aaKnown RBP12.98□□□□□ -0.33
TSPAN4-218ENST00000529566 ZNF747Q9BV97 191 aa12.98□□□□□ -0.33
TSPAN4-218ENST00000529566 MMP28Q9H239 520 aa12.98□□□□□ -0.33
TSPAN4-218ENST00000529566 RNF167Q9H6Y7 350 aa12.98□□□□□ -0.33
TSPAN4-218ENST00000529566 RAB22AQ9UL26 194 aa12.98□□□□□ -0.33
TSPAN4-218ENST00000529566 HSF4Q9ULV5 492 aa12.98□□□□□ -0.33
TSPAN4-218ENST00000529566 A0A0B4J203 849 aa12.97□□□□□ -0.33
TSPAN4-218ENST00000529566 TSPAN9O75954 239 aa12.97□□□□□ -0.33
TSPAN4-218ENST00000529566 HBZP02008 142 aa12.97□□□□□ -0.33
TSPAN4-218ENST00000529566 PLAC9Q5JTB6 97 aa12.97□□□□□ -0.33
TSPAN4-218ENST00000529566 C6orf183Q5T699 404 aa12.97□□□□□ -0.33
TSPAN4-218ENST00000529566 TPTE2P1Q5T6R2 138 aa12.97□□□□□ -0.33
TSPAN4-218ENST00000529566 ZNF880Q6PDB4 577 aa12.97□□□□□ -0.33
TSPAN4-218ENST00000529566 TPRA1Q86W33 373 aa12.97□□□□□ -0.33
TSPAN4-218ENST00000529566 C3orf56Q8N813 242 aa12.97□□□□□ -0.33
TSPAN4-218ENST00000529566 C8orf31Q8N9H6 132 aa12.97□□□□□ -0.33
TSPAN4-218ENST00000529566 OR4F5Q8NH21 305 aa12.97□□□□□ -0.33
TSPAN4-218ENST00000529566 OR1L1Q8NH94 360 aa12.97□□□□□ -0.33
TSPAN4-218ENST00000529566 LINC01006Q8NI28 216 aa12.97□□□□□ -0.33
TSPAN4-218ENST00000529566 CREB3L1Q96BA8 519 aa12.97□□□□□ -0.33
TSPAN4-218ENST00000529566 CHCHD6Q9BRQ6 235 aa12.97□□□□□ -0.33
TSPAN4-218ENST00000529566 C16orf95Q9H693 158 aa12.97□□□□□ -0.33
TSPAN4-218ENST00000529566 LIN7BQ9HAP6 207 aa12.97□□□□□ -0.33
TSPAN4-218ENST00000529566 PLEKHJ1Q9NW61 149 aa12.97□□□□□ -0.33
TSPAN4-218ENST00000529566 GFOD1Q9NXC2 390 aa12.97□□□□□ -0.33
TSPAN4-218ENST00000529566 TCF19Q9Y242 345 aa12.97□□□□□ -0.33
TSPAN4-218ENST00000529566 A0A1W2PPE3 182 aa12.96□□□□□ -0.33
TSPAN4-218ENST00000529566 SMIM30A4D0T7 59 aa12.96□□□□□ -0.33
TSPAN4-218ENST00000529566 POM121CA8CG34 1229 aa12.96□□□□□ -0.33
TSPAN4-218ENST00000529566 NOTOA8MTQ0 251 aa12.96□□□□□ -0.33
TSPAN4-218ENST00000529566 SDCBPO00560 298 aaPredicted RBP12.96□□□□□ -0.33
TSPAN4-218ENST00000529566 SLC2A2P11168 524 aaPredicted RBP12.96□□□□□ -0.33
TSPAN4-218ENST00000529566 SDC2P34741 201 aa12.96□□□□□ -0.33
TSPAN4-218ENST00000529566 RANBP1P43487 201 aa12.96□□□□□ -0.33
TSPAN4-218ENST00000529566 VEGFCP49767 419 aa12.96□□□□□ -0.33
TSPAN4-218ENST00000529566 FBLN7Q53RD9 439 aa12.96□□□□□ -0.33
TSPAN4-218ENST00000529566 DHRS7BQ6IAN0 325 aaPredicted RBP12.96□□□□□ -0.33
TSPAN4-218ENST00000529566 TRAT1Q6PIZ9 186 aa12.96□□□□□ -0.33
TSPAN4-218ENST00000529566 LIAT1Q6ZQX7 453 aa12.96□□□□□ -0.33
TSPAN4-218ENST00000529566 ZNF554Q86TJ5 538 aa12.96□□□□□ -0.33
TSPAN4-218ENST00000529566 YIPF6Q96EC8 236 aa12.96□□□□□ -0.33
TSPAN4-218ENST00000529566 CENPOQ9BU64 300 aa12.96□□□□□ -0.33
TSPAN4-218ENST00000529566 BEX1Q9HBH7 125 aa12.96□□□□□ -0.33
TSPAN4-218ENST00000529566 TAF9BQ9HBM6 251 aa12.96□□□□□ -0.33
TSPAN4-218ENST00000529566 KCNK7Q9Y2U2 307 aa12.96□□□□□ -0.33
TSPAN4-218ENST00000529566 TRBV6-6A0A0A6YYG2 114 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 IGHV3-43A0A0B4J1X8 118 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 A0A1B0GUS0 222 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 CLPSL1A2RUU4 121 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 SPINT2O43291 252 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 CLEC2LP0C7M8 214 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 IGHV3-43DP0DP04 118 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 RAB6AP20340 208 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 CEACAM3P40198 252 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 GNG10P50151 68 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 ZNF134P52741 427 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 DIAPH2-AS1Q14236 149 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 MOGAT2Q3SYC2 334 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 Q3ZCU0 254 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 LINC00311Q8N616 119 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 ZNF439Q8NDP4 499 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 OR56B1Q8NGI3 324 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 ARHGAP5-AS1Q96IT6 56 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 KCTD7Q96MP8 289 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 PECRQ9BY49 303 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 ABCB10Q9NRK6 738 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 AK3Q9UIJ7 227 aa12.95□□□□□ -0.34
TSPAN4-218ENST00000529566 LOC100506127A0A0U1RQW1 187 aa12.94□□□□□ -0.34
TSPAN4-218ENST00000529566 OOSP1A8MZH6 123 aa12.94□□□□□ -0.34
TSPAN4-218ENST00000529566 RAB27BO00194 218 aa12.94□□□□□ -0.34
TSPAN4-218ENST00000529566 HMGN3Q15651 99 aa12.94□□□□□ -0.34
TSPAN4-218ENST00000529566 TMEM30BQ3MIR4 351 aa12.94□□□□□ -0.34
TSPAN4-218ENST00000529566 OLFML2AQ68BL7 652 aa12.94□□□□□ -0.34
TSPAN4-218ENST00000529566 Q6ZTK2 550 aa12.94□□□□□ -0.34
TSPAN4-218ENST00000529566 TMEM219Q86XT9 240 aa12.94□□□□□ -0.34
TSPAN4-218ENST00000529566 PTX4Q96A99 478 aa12.94□□□□□ -0.34
TSPAN4-218ENST00000529566 HDHD3Q9BSH5 251 aaPredicted RBP12.94□□□□□ -0.34
TSPAN4-218ENST00000529566 TRRAPQ9Y4A5 3859 aa12.93□□□□□ -0.34
TSPAN4-218ENST00000529566 FAM90A9PA6NNJ1 464 aa12.93□□□□□ -0.34
TSPAN4-218ENST00000529566 SLC31A2O15432 143 aa12.93□□□□□ -0.34
TSPAN4-218ENST00000529566 CD24P25063 80 aa12.93□□□□□ -0.34
TSPAN4-218ENST00000529566 PROK1P58294 105 aa12.93□□□□□ -0.34
TSPAN4-218ENST00000529566 KRTAP10-3P60369 221 aa12.93□□□□□ -0.34
TSPAN4-218ENST00000529566 MADCAM1Q13477 382 aa12.93□□□□□ -0.34
TSPAN4-218ENST00000529566 CT45A1Q5HYN5 189 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms