RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 OR52M1Q8NGK5 317 aa13.09□□□□□ -0.31
SSSCA1-202ENST00000526433 OR4F5Q8NH21 305 aa13.09□□□□□ -0.31
SSSCA1-202ENST00000526433 MRPL30Q8TCC3 161 aaKnown RBP13.09□□□□□ -0.31
SSSCA1-202ENST00000526433 CREB3L1Q96BA8 519 aa13.09□□□□□ -0.31
SSSCA1-202ENST00000526433 ZNF696Q9H7X3 374 aa13.09□□□□□ -0.31
SSSCA1-202ENST00000526433 VCX3AQ9NNX9 186 aa13.09□□□□□ -0.31
SSSCA1-202ENST00000526433 ABCB10Q9NRK6 738 aa13.09□□□□□ -0.31
SSSCA1-202ENST00000526433 PLEKHJ1Q9NW61 149 aa13.09□□□□□ -0.31
SSSCA1-202ENST00000526433 LOC100506127A0A0U1RQW1 187 aa13.08□□□□□ -0.32
SSSCA1-202ENST00000526433 SMIM30A4D0T7 59 aa13.08□□□□□ -0.32
SSSCA1-202ENST00000526433 LY6LH3BQJ8 138 aa13.08□□□□□ -0.32
SSSCA1-202ENST00000526433 F2RL2O00254 374 aa13.08□□□□□ -0.32
SSSCA1-202ENST00000526433 SPINT2O43291 252 aa13.08□□□□□ -0.32
SSSCA1-202ENST00000526433 CFPP27918 469 aa13.08□□□□□ -0.32
SSSCA1-202ENST00000526433 CEACAM3P40198 252 aa13.08□□□□□ -0.32
SSSCA1-202ENST00000526433 TMEM50BP56557 158 aa13.08□□□□□ -0.32
SSSCA1-202ENST00000526433 DHRS7BQ6IAN0 325 aaPredicted RBP13.08□□□□□ -0.32
SSSCA1-202ENST00000526433 TRAT1Q6PIZ9 186 aa13.08□□□□□ -0.32
SSSCA1-202ENST00000526433 TPRA1Q86W33 373 aa13.08□□□□□ -0.32
SSSCA1-202ENST00000526433 KCTD7Q96MP8 289 aa13.08□□□□□ -0.32
SSSCA1-202ENST00000526433 MMP28Q9H239 520 aa13.08□□□□□ -0.32
SSSCA1-202ENST00000526433 BEX1Q9HBH7 125 aa13.08□□□□□ -0.32
SSSCA1-202ENST00000526433 MBNL3Q9NUK0 354 aaKnown RBP13.08□□□□□ -0.32
SSSCA1-202ENST00000526433 GFOD1Q9NXC2 390 aa13.08□□□□□ -0.32
SSSCA1-202ENST00000526433 KCNIP1Q9NZI2 227 aa13.08□□□□□ -0.32
SSSCA1-202ENST00000526433 IGHV3-43A0A0B4J1X8 118 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 A0A0B4J203 849 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 A0A1W2PPE3 182 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 POM121CA8CG34 1229 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 FOXI3A8MTJ6 420 aaPredicted RBP13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 NOTOA8MTQ0 251 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 SDCBPO00560 298 aaPredicted RBP13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 HBZP02008 142 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 IGHV3-43DP0DP04 118 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 SLC2A2P11168 524 aaPredicted RBP13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 SDC2P34741 201 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 GNG10P50151 68 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 DYNLT3P51808 116 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 LOXL3P58215 753 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 TPTE2P1Q5T6R2 138 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 FAM53AQ6NSI3 398 aaPredicted RBP13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 Q6ZSV7 163 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 Q6ZTK2 550 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 C5orf24Q7Z6I8 188 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 OR56B1Q8NGI3 324 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 OR1L1Q8NH94 360 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 RNF167Q9H6Y7 350 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 LIN7BQ9HAP6 207 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 TAF9BQ9HBM6 251 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 RAB9BQ9NP90 201 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 HSF4Q9ULV5 492 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 MMP24Q9Y5R2 645 aa13.07□□□□□ -0.32
SSSCA1-202ENST00000526433 A0A1B0GUS0 222 aa13.06□□□□□ -0.32
SSSCA1-202ENST00000526433 CLPSL1A2RUU4 121 aa13.06□□□□□ -0.32
SSSCA1-202ENST00000526433 A6NDX4 124 aa13.06□□□□□ -0.32
SSSCA1-202ENST00000526433 TRIM64CA6NLI5 447 aa13.06□□□□□ -0.32
SSSCA1-202ENST00000526433 EFNB2P52799 333 aa13.06□□□□□ -0.32
SSSCA1-202ENST00000526433 CCBE1Q6UXH8 406 aaPredicted RBP13.06□□□□□ -0.32
SSSCA1-202ENST00000526433 PRR18Q8N4B5 295 aa13.06□□□□□ -0.32
SSSCA1-202ENST00000526433 ARHGAP5-AS1Q96IT6 56 aa13.06□□□□□ -0.32
SSSCA1-202ENST00000526433 CENPOQ9BU64 300 aa13.06□□□□□ -0.32
SSSCA1-202ENST00000526433 PECRQ9BY49 303 aa13.06□□□□□ -0.32
SSSCA1-202ENST00000526433 AK3Q9UIJ7 227 aa13.06□□□□□ -0.32
SSSCA1-202ENST00000526433 TCF19Q9Y242 345 aa13.06□□□□□ -0.32
SSSCA1-202ENST00000526433 AMMECR1Q9Y4X0 333 aaPredicted RBP13.06□□□□□ -0.32
SSSCA1-202ENST00000526433 OOSP1A8MZH6 123 aa13.05□□□□□ -0.32
SSSCA1-202ENST00000526433 TSPAN9O75954 239 aa13.05□□□□□ -0.32
SSSCA1-202ENST00000526433 NAPSAO96009 420 aa13.05□□□□□ -0.32
SSSCA1-202ENST00000526433 CLEC2LP0C7M8 214 aa13.05□□□□□ -0.32
SSSCA1-202ENST00000526433 RAB6AP20340 208 aa13.05□□□□□ -0.32
SSSCA1-202ENST00000526433 BRS3P32247 399 aa13.05□□□□□ -0.32
SSSCA1-202ENST00000526433 MXD1Q05195 221 aa13.05□□□□□ -0.32
SSSCA1-202ENST00000526433 OLFML2AQ68BL7 652 aa13.05□□□□□ -0.32
SSSCA1-202ENST00000526433 LIAT1Q6ZQX7 453 aa13.05□□□□□ -0.32
SSSCA1-202ENST00000526433 ZNF554Q86TJ5 538 aa13.05□□□□□ -0.32
SSSCA1-202ENST00000526433 YIPF6Q96EC8 236 aa13.05□□□□□ -0.32
SSSCA1-202ENST00000526433 ZNF747Q9BV97 191 aa13.05□□□□□ -0.32
SSSCA1-202ENST00000526433 RIMS4Q9H426 269 aaPredicted RBP13.05□□□□□ -0.32
SSSCA1-202ENST00000526433 CHMP1AQ9HD42 196 aaPredicted RBP13.05□□□□□ -0.32
SSSCA1-202ENST00000526433 RAB18Q9NP72 206 aa13.05□□□□□ -0.32
SSSCA1-202ENST00000526433 GNG12Q9UBI6 72 aa13.05□□□□□ -0.32
SSSCA1-202ENST00000526433 PITPNC1Q9UKF7 332 aa13.05□□□□□ -0.32
SSSCA1-202ENST00000526433 CHST1O43916 411 aa13.04□□□□□ -0.32
SSSCA1-202ENST00000526433 MADCAM1Q13477 382 aa13.04□□□□□ -0.32
SSSCA1-202ENST00000526433 TMEM30BQ3MIR4 351 aa13.04□□□□□ -0.32
SSSCA1-202ENST00000526433 PLAC9Q5JTB6 97 aa13.04□□□□□ -0.32
SSSCA1-202ENST00000526433 ZNF880Q6PDB4 577 aa13.04□□□□□ -0.32
SSSCA1-202ENST00000526433 TMEM219Q86XT9 240 aa13.04□□□□□ -0.32
SSSCA1-202ENST00000526433 LINC00311Q8N616 119 aa13.04□□□□□ -0.32
SSSCA1-202ENST00000526433 C8orf31Q8N9H6 132 aa13.04□□□□□ -0.32
SSSCA1-202ENST00000526433 OR10V1Q8NGI7 309 aa13.04□□□□□ -0.32
SSSCA1-202ENST00000526433 OR10X1Q8NGY0 326 aa13.04□□□□□ -0.32
SSSCA1-202ENST00000526433 LINC01006Q8NI28 216 aa13.04□□□□□ -0.32
SSSCA1-202ENST00000526433 SETD6Q8TBK2 473 aa13.04□□□□□ -0.32
SSSCA1-202ENST00000526433 PTX4Q96A99 478 aa13.04□□□□□ -0.32
SSSCA1-202ENST00000526433 RPEQ96AT9 228 aa13.04□□□□□ -0.32
SSSCA1-202ENST00000526433 OCSTAMPQ9BR26 566 aa13.04□□□□□ -0.32
SSSCA1-202ENST00000526433 C16orf95Q9H693 158 aa13.04□□□□□ -0.32
SSSCA1-202ENST00000526433 OR2S2Q9NQN1 319 aa13.04□□□□□ -0.32
SSSCA1-202ENST00000526433 DAPK2Q9UIK4 370 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms