RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 ZNF695Q8IW36 515 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 Q8IYB0 196 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 OR13F1Q8NGS4 319 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 OR10AC1Q8NH08 325 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 CHPT1Q8WUD6 406 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 RGP1Q92546 391 aaPredicted RBP5.18□□□□□ -1.58
CD44-221ENST00000526000 TOMM40LQ969M1 308 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 COQ2Q96H96 371 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 DERL3Q96Q80 235 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 OR5B12Q96R08 314 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 P2RX4Q99571 388 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 GPR61Q9BZJ8 451 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 GAL3ST2Q9H3Q3 398 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 TMEM138Q9NPI0 162 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 PCDHB16Q9NRJ7 776 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 TAS2R3Q9NYW6 316 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 SSR3Q9UNL2 185 aa5.18□□□□□ -1.58
CD44-221ENST00000526000 LSM4Q9Y4Z0 139 aaKnown RBP5.18□□□□□ -1.58
CD44-221ENST00000526000 TENM2Q9NT68 2774 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 MEIKINA0A087WXM9 373 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 FUOMA2VDF0 154 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 FAM90A18PA6NE21 464 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 FAM90A16PA6NEW6 464 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 FAM90A20PA6NIJ5 464 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 FAM90A9PA6NNJ1 464 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 FAM90A12PA8MX19 464 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 FAM90A5PA8MXJ8 464 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 SEC14L6B5MCN3 397 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 J3QR06 171 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 M0QZK8 103 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 GABRPO00591 440 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 PDCD5O14737 125 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 TFAP2AP05549 437 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 FAM90A15PP0C7V4 464 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 FAM90A13PP0C7W8 464 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 FAM90A14PP0C7W9 464 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 FAM90A24PP0C7X0 464 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 CD37P11049 281 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 CD36P16671 472 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 IGFBP3P17936 291 aaPredicted RBP5.17□□□□□ -1.58
CD44-221ENST00000526000 MYL9P24844 172 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 BDKRB2P30411 391 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 SLC35B1P78383 322 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 ZNF146Q15072 292 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 ZNF260Q3ZCT1 412 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 GLT8D1Q68CQ7 371 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 GPR141Q7Z602 305 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 CEACAM19Q7Z692 300 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 TPRA1Q86W33 373 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 CROCCP3Q8IVE0 287 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 SBSPONQ8IVN8 264 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 SAXO1Q8IYX7 474 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 STPG2Q8N412 459 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 C5orf56Q8N8D9 126 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 ZFP41Q8N8Y5 198 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 OR51A4Q8NGJ6 313 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 OR13A1Q8NGR1 328 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 OR13C9Q8NGT0 318 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 OR10K1Q8NGX5 313 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 OR9G1Q8NH87 305 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 MRGPRDQ8TDS7 321 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 CORO2AQ92828 525 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 YIPF6Q96EC8 236 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 KIRREL1Q96J84 757 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 KCTD7Q96MP8 289 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 OR14A2Q96R54 314 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 UQCC2Q9BRT2 126 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 TMED9Q9BVK6 235 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 ZFP57Q9NU63 452 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 IDI2-AS1Q9NZ38 188 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 NDUFA13Q9P0J0 144 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 ZNF581Q9P0T4 197 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 GHRLQ9UBU3 117 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 KIF25Q9UIL4 384 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 PSG11Q9UQ72 335 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 DNAH9Q9NYC9 4486 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 TENM3Q9P273 2699 aa5.17□□□□□ -1.58
CD44-221ENST00000526000 DNAH3Q8TD57 4116 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 IGHV3-43A0A0B4J1X8 118 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 KBTBD11-OT1A0A1B0GTJ5 212 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 PNMA8CA0A1B0GUJ8 204 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 A0A1W2PPI3 338 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 ZNF729A6NN14 1252 aaPredicted RBP5.16□□□□□ -1.58
CD44-221ENST00000526000 ZNF736B4DX44 427 aaPredicted RBP5.16□□□□□ -1.58
CD44-221ENST00000526000 C3orf84H3BNL1 204 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 SLC33A1O00400 549 aaPredicted RBP5.16□□□□□ -1.58
CD44-221ENST00000526000 AIREO43918 545 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 RAMP3O60896 148 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 NOL3O60936 208 aaKnown RBP5.16□□□□□ -1.58
CD44-221ENST00000526000 ZNF780AO75290 641 aaPredicted RBP5.16□□□□□ -1.58
CD44-221ENST00000526000 HCKP08631 526 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 UBBP0CG47 229 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 CGB3P0DN86 165 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 CGB7P0DN87 165 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 IGHV3-43DP0DP04 118 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 SRMP19623 302 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 CD34P28906 385 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 SOX2P48431 317 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 MTNR1BP49286 362 aa5.16□□□□□ -1.58
CD44-221ENST00000526000 RPS25P62851 125 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms