RNA–Protein interactions for RNA: ENST00000523777.5

TRAPPC9-214, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-214ENST00000523777 C12orf4Q9NQ89 552 aa13.12□□□□□ -0.31
TRAPPC9-214ENST00000523777 ABRACLQ9P1F3 81 aa13.12□□□□□ -0.31
TRAPPC9-214ENST00000523777 SMIM30A4D0T7 59 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 SERPINE3A8MV23 424 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 OOSP1A8MZH6 123 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 C12orf77C9JDV5 145 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 SDCBPO00560 298 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 NAPSAO96009 420 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 DYNLT3P51808 116 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 TMEM50BP56557 158 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 ACTG1P63261 375 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 HLA-DRB5Q30154 266 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 IDNKQ5T6J7 187 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 CCDC144NLQ6NUI1 221 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 LIAT1Q6ZQX7 453 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 OR4P4Q8NGL7 312 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 GALMQ96C23 342 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 ARHGAP5-AS1Q96IT6 56 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 SSX3Q99909 188 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 CMSS1Q9BQ75 279 aaKnown RBP13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 PECRQ9BY49 303 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 ATG5Q9H1Y0 275 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 MMP28Q9H239 520 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 TAF9BQ9HBM6 251 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 ZNF286AQ9HBT8 521 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 RAB18Q9NP72 206 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 ABCB10Q9NRK6 738 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 GFOD1Q9NXC2 390 aa13.11□□□□□ -0.31
TRAPPC9-214ENST00000523777 A0A0A6YYH2 397 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 TRAV39A0A0B4J263 110 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 A6NJ64 397 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 BUB1B-PAK6H3BSN5 160 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 J3QR06 171 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 RAB27BO00194 218 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 RGS11O94810 467 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 HBZP02008 142 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 CD3GP09693 182 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 RCC1P18754 421 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 GDNFP39905 211 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 ALDH3B2P48448 385 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 LSM3P62310 102 aaKnown RBP13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 HTD2P86397 168 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 SSX2Q16385 188 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 STEAP3Q658P3 488 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 ZNF880Q6PDB4 577 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 LHFPL4Q7Z7J7 247 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 DTX3Q8N9I9 347 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 GCDHQ92947 438 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 KCTD12Q96CX2 325 aaKnown RBP13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 AJUBAQ96IF1 538 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 DUX5Q96PT3 197 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 GNG12Q9UBI6 72 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 AK3Q9UIJ7 227 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 PITPNC1Q9UKF7 332 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 VPREB3Q9UKI3 123 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 SPATA2Q9UM82 520 aa13.1□□□□□ -0.31
TRAPPC9-214ENST00000523777 A0A0B4J203 849 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 IGHV4-59P01825 116 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 TFAP2AP05549 437 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 CLEC2LP0C7M8 214 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 SNRPBP14678 240 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 HIST1H1DP16402 221 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 IL3RAP26951 378 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 BRS3P32247 399 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 RPS19P39019 145 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 MNDAP41218 407 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 EFNB2P52799 333 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 LOXL3P58215 753 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 SRSF2Q01130 221 aaKnown RBP13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 FOXL1Q12952 345 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 LTC4SQ16873 150 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 LY6G6FQ5SQ64 297 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 PRR18Q8N4B5 295 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 LINC00311Q8N616 119 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 OR10X1Q8NGY0 326 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 SPATA3Q8NHX4 192 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 LGALS14Q8TCE9 139 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 MDFIQ99750 246 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 CHIAQ9BZP6 476 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 RHBDL2Q9NX52 303 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 JPT1Q9UK76 154 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 PSG11Q9UQ72 335 aa13.09□□□□□ -0.31
TRAPPC9-214ENST00000523777 FAM172BPA6NC97 362 aa13.08□□□□□ -0.32
TRAPPC9-214ENST00000523777 H3BUX3 64 aa13.08□□□□□ -0.32
TRAPPC9-214ENST00000523777 GABARAPO95166 117 aa13.08□□□□□ -0.32
TRAPPC9-214ENST00000523777 LPLP06858 475 aa13.08□□□□□ -0.32
TRAPPC9-214ENST00000523777 HKR1P10072 659 aa13.08□□□□□ -0.32
TRAPPC9-214ENST00000523777 RPL5P46777 297 aaKnown RBP13.08□□□□□ -0.32
TRAPPC9-214ENST00000523777 SERPINB10P48595 397 aa13.08□□□□□ -0.32
TRAPPC9-214ENST00000523777 PITPNAQ00169 270 aa13.08□□□□□ -0.32
TRAPPC9-214ENST00000523777 MADCAM1Q13477 382 aa13.08□□□□□ -0.32
TRAPPC9-214ENST00000523777 HMGN3Q15651 99 aa13.08□□□□□ -0.32
TRAPPC9-214ENST00000523777 PLAC9Q5JTB6 97 aa13.08□□□□□ -0.32
TRAPPC9-214ENST00000523777 BAIAP2L2Q6UXY1 529 aa13.08□□□□□ -0.32
TRAPPC9-214ENST00000523777 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC9-214ENST00000523777 SETD6Q8TBK2 473 aa13.08□□□□□ -0.32
TRAPPC9-214ENST00000523777 C17orf50Q8WW18 174 aa13.08□□□□□ -0.32
TRAPPC9-214ENST00000523777 SLC25A46Q96AG3 418 aa13.08□□□□□ -0.32
TRAPPC9-214ENST00000523777 RPEQ96AT9 228 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms