RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 LGALS12Q96DT0 336 aa8.58□□□□□ -1.04
CSMD1-210ENST00000521646 RNFT2Q96EX2 444 aa8.58□□□□□ -1.04
CSMD1-210ENST00000521646 S1PR3Q99500 378 aa8.58□□□□□ -1.04
CSMD1-210ENST00000521646 KRTAP4-9Q9BYQ8 210 aa8.58□□□□□ -1.04
CSMD1-210ENST00000521646 GPR61Q9BZJ8 451 aa8.58□□□□□ -1.04
CSMD1-210ENST00000521646 GLS2Q9UI32 602 aa8.58□□□□□ -1.04
CSMD1-210ENST00000521646 OAZ3Q9UMX2 235 aa8.58□□□□□ -1.04
CSMD1-210ENST00000521646 ALMS1Q8TCU4 4167 aa8.58□□□□□ -1.04
CSMD1-210ENST00000521646 SAC3D1A6NKF1 404 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 NCBP2LA6PVI3 153 aaKnown RBP8.57□□□□□ -1.04
CSMD1-210ENST00000521646 J3QLW9 94 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 AP4M1O00189 453 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 CCRL2O00421 344 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 GYG2O15488 501 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 SULT1B1O43704 296 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 RAMP3O60896 148 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 HCKP08631 526 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 HTR1AP08908 422 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 ZNF19P17023 458 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 CHATP28329 748 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 PPIFP30405 207 aaKnown RBP8.57□□□□□ -1.04
CSMD1-210ENST00000521646 SLC6A1P30531 599 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 MTNR1BP49286 362 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 RAB7AP51149 207 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 GTF2A1P52655 376 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-210ENST00000521646 NDPQ00604 133 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 BNIP1Q12981 228 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 C9orf66Q5T8R8 295 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 UNQ9370/PRO34162Q6UXP9 181 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 LHFPL3Q86UP9 236 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 OR11H1Q8NG94 326 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 OR8U1Q8NH10 309 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 CASTOR1Q8WTX7 329 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 C4orf3Q8WVX3 66 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 RCHY1Q96PM5 261 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 OR5B12Q96R08 314 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 PRRG3Q9BZD7 231 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 NCOR1P1Q9H4R4 102 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 LIN7CQ9NUP9 197 aaKnown RBP8.57□□□□□ -1.04
CSMD1-210ENST00000521646 TAS2R4Q9NYW5 299 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 ZNF107Q9UII5 783 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-210ENST00000521646 ZNF256Q9Y2P7 627 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-210ENST00000521646 FBXO7Q9Y3I1 522 aa8.57□□□□□ -1.04
CSMD1-210ENST00000521646 AMMECR1Q9Y4X0 333 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-210ENST00000521646 SIRT4Q9Y6E7 314 aaPredicted RBP8.57□□□□□ -1.04
CSMD1-210ENST00000521646 DAPL1A0PJW8 107 aa8.56□□□□□ -1.04
CSMD1-210ENST00000521646 FUOMA2VDF0 154 aa8.56□□□□□ -1.04
CSMD1-210ENST00000521646 TRIM64CA6NLI5 447 aa8.56□□□□□ -1.04
CSMD1-210ENST00000521646 H3BUI4 141 aa8.56□□□□□ -1.04
CSMD1-210ENST00000521646 GEMIN2O14893 280 aaKnown RBP8.56□□□□□ -1.04
CSMD1-210ENST00000521646 SOX15O60248 233 aa8.56□□□□□ -1.04
CSMD1-210ENST00000521646 PLA2G1BP04054 148 aaKnown RBP8.56□□□□□ -1.04
CSMD1-210ENST00000521646 SLC2A2P11168 524 aaPredicted RBP8.56□□□□□ -1.04
CSMD1-210ENST00000521646 ARHGDIBP52566 201 aa8.56□□□□□ -1.04
CSMD1-210ENST00000521646 CT45A1Q5HYN5 189 aa8.56□□□□□ -1.04
CSMD1-210ENST00000521646 FAM220AQ7Z4H9 259 aa8.56□□□□□ -1.04
CSMD1-210ENST00000521646 HAPLN4Q86UW8 402 aa8.56□□□□□ -1.04
CSMD1-210ENST00000521646 FOXRED2Q8IWF2 684 aa8.56□□□□□ -1.04
CSMD1-210ENST00000521646 LINC00311Q8N616 119 aa8.56□□□□□ -1.04
CSMD1-210ENST00000521646 COMMD1Q8N668 190 aa8.56□□□□□ -1.04
CSMD1-210ENST00000521646 PXT1Q8NFP0 134 aa8.56□□□□□ -1.04
CSMD1-210ENST00000521646 OR5M8Q8NGP6 311 aa8.56□□□□□ -1.04
CSMD1-210ENST00000521646 OR10X1Q8NGY0 326 aa8.56□□□□□ -1.04
CSMD1-210ENST00000521646 CT45A3Q8NHU0 189 aa8.56□□□□□ -1.04
CSMD1-210ENST00000521646 HAVCR2Q8TDQ0 301 aa8.56□□□□□ -1.04
CSMD1-210ENST00000521646 CCDC107Q8WV48 283 aa8.56□□□□□ -1.04
CSMD1-210ENST00000521646 KCTD7Q96MP8 289 aa8.56□□□□□ -1.04
CSMD1-210ENST00000521646 DPCDQ9BVM2 203 aaPredicted RBP8.56□□□□□ -1.04
CSMD1-210ENST00000521646 PCDHB16Q9NRJ7 776 aa8.56□□□□□ -1.04
CSMD1-210ENST00000521646 EXOGQ9Y2C4 368 aaKnown RBP8.56□□□□□ -1.04
CSMD1-210ENST00000521646 LCE6AA0A183 80 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 IGF1P05019 195 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 ELANEP08246 267 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 FRMD6-AS1P0C7T7 363 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 SPNP16150 400 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 HOXB6P17509 224 aaKnown RBP8.55□□□□□ -1.04
CSMD1-210ENST00000521646 ATP6V1E1P36543 226 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 SOX2P48431 317 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 SLURP1P55000 103 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 SLC35B1P78383 322 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 ADARB1P78563 741 aaKnown RBP8.55□□□□□ -1.04
CSMD1-210ENST00000521646 TMED1Q13445 227 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 IL13RA2Q14627 380 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 GNMTQ14749 295 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 DNAL1Q4LDG9 190 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 C19orf54Q5BKX5 351 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 CXorf66Q5JRM2 361 aaPredicted RBP8.55□□□□□ -1.04
CSMD1-210ENST00000521646 ZFAND6Q6FIF0 208 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 ODF3L1Q8IXM7 274 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 ZNF491Q8N8L2 437 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 ZNF565Q8N9K5 539 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 OR13C5Q8NGS8 318 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 TNFAIP8L1Q8WVP5 186 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 DCUN1D4Q92564 292 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 ALG8Q9BVK2 526 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 RHOFQ9HBH0 211 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 AMBNQ9NP70 447 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 WSB1Q9Y6I7 421 aa8.55□□□□□ -1.04
CSMD1-210ENST00000521646 IGHV7-81A0A0B4J1V7 117 aa8.54□□□□□ -1.04
CSMD1-210ENST00000521646 C12orf77C9JDV5 145 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms