RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 ZNF581Q9P0T4 197 aa11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 ZNF580Q9UK33 172 aa11.47□□□□□ -0.57
SCARNA20.5-201ENST00000516991 LOC100130705A0A1B0GUX0 176 aa11.46□□□□□ -0.57
SCARNA20.5-201ENST00000516991 IRGMA1A4Y4 181 aa11.46□□□□□ -0.57
SCARNA20.5-201ENST00000516991 SPINT2O43291 252 aa11.46□□□□□ -0.57
SCARNA20.5-201ENST00000516991 IGHG4P01861 327 aa11.46□□□□□ -0.57
SCARNA20.5-201ENST00000516991 OR5H8P0DN80 308 aa11.46□□□□□ -0.57
SCARNA20.5-201ENST00000516991 VDAC1P21796 283 aa11.46□□□□□ -0.57
SCARNA20.5-201ENST00000516991 RIPK1Q13546 671 aa11.46□□□□□ -0.57
SCARNA20.5-201ENST00000516991 C6orf183Q5T699 404 aa11.46□□□□□ -0.57
SCARNA20.5-201ENST00000516991 TRAT1Q6PIZ9 186 aa11.46□□□□□ -0.57
SCARNA20.5-201ENST00000516991 C4orf3Q8WVX3 66 aa11.46□□□□□ -0.57
SCARNA20.5-201ENST00000516991 SMIM19Q96E16 107 aa11.46□□□□□ -0.57
SCARNA20.5-201ENST00000516991 DUX3Q96PT4 197 aa11.46□□□□□ -0.57
SCARNA20.5-201ENST00000516991 S1PR3Q99500 378 aa11.46□□□□□ -0.57
SCARNA20.5-201ENST00000516991 CKLFQ9UBR5 152 aa11.46□□□□□ -0.57
SCARNA20.5-201ENST00000516991 DNAH9Q9NYC9 4486 aa11.46□□□□□ -0.58
SCARNA20.5-201ENST00000516991 LINC01548A6NM66 108 aa11.45□□□□□ -0.58
SCARNA20.5-201ENST00000516991 MT-ND4P03905 459 aa11.45□□□□□ -0.58
SCARNA20.5-201ENST00000516991 DCKP27707 260 aa11.45□□□□□ -0.58
SCARNA20.5-201ENST00000516991 SOX6P35712 828 aa11.45□□□□□ -0.58
SCARNA20.5-201ENST00000516991 LUMP51884 338 aaPredicted RBP11.45□□□□□ -0.58
SCARNA20.5-201ENST00000516991 SLC22A6Q4U2R8 563 aa11.45□□□□□ -0.58
SCARNA20.5-201ENST00000516991 XAF1Q6GPH4 301 aa11.45□□□□□ -0.58
SCARNA20.5-201ENST00000516991 LCNL1Q6ZST4 164 aa11.45□□□□□ -0.58
SCARNA20.5-201ENST00000516991 SLC25A48Q6ZT89 311 aaKnown RBP11.45□□□□□ -0.58
SCARNA20.5-201ENST00000516991 FAM71E2Q8N5Q1 922 aa11.45□□□□□ -0.58
SCARNA20.5-201ENST00000516991 CCDC107Q8WV48 283 aa11.45□□□□□ -0.58
SCARNA20.5-201ENST00000516991 MRPS24Q96EL2 167 aaKnown RBP11.45□□□□□ -0.58
SCARNA20.5-201ENST00000516991 ZNF184Q99676 751 aaPredicted RBP11.45□□□□□ -0.58
SCARNA20.5-201ENST00000516991 CHCHD6Q9BRQ6 235 aa11.45□□□□□ -0.58
SCARNA20.5-201ENST00000516991 PLSCR3Q9NRY6 295 aa11.45□□□□□ -0.58
SCARNA20.5-201ENST00000516991 RCC2Q9P258 522 aaKnown RBP11.45□□□□□ -0.58
SCARNA20.5-201ENST00000516991 GNG12Q9UBI6 72 aa11.45□□□□□ -0.58
SCARNA20.5-201ENST00000516991 TRAPPC2LQ9UL33 140 aa11.45□□□□□ -0.58
SCARNA20.5-201ENST00000516991 IGHV3-43A0A0B4J1X8 118 aa11.44□□□□□ -0.58
SCARNA20.5-201ENST00000516991 SEC14L6B5MCN3 397 aa11.44□□□□□ -0.58
SCARNA20.5-201ENST00000516991 C12orf77C9JDV5 145 aa11.44□□□□□ -0.58
SCARNA20.5-201ENST00000516991 MCRIP1C9JLW8 97 aa11.44□□□□□ -0.58
SCARNA20.5-201ENST00000516991 OGG1O15527 345 aa11.44□□□□□ -0.58
SCARNA20.5-201ENST00000516991 CA11O75493 328 aa11.44□□□□□ -0.58
SCARNA20.5-201ENST00000516991 IGF1P05019 195 aa11.44□□□□□ -0.58
SCARNA20.5-201ENST00000516991 IGHV3-43DP0DP04 118 aa11.44□□□□□ -0.58
SCARNA20.5-201ENST00000516991 VSIG8P0DPA2 414 aa11.44□□□□□ -0.58
SCARNA20.5-201ENST00000516991 IGFBP3P17936 291 aaPredicted RBP11.44□□□□□ -0.58
SCARNA20.5-201ENST00000516991 MYL12AP19105 171 aa11.44□□□□□ -0.58
SCARNA20.5-201ENST00000516991 FSTP19883 344 aa11.44□□□□□ -0.58
SCARNA20.5-201ENST00000516991 CFHR3Q02985 330 aa11.44□□□□□ -0.58
SCARNA20.5-201ENST00000516991 DEFB136Q30KP8 78 aa11.44□□□□□ -0.58
SCARNA20.5-201ENST00000516991 ZNF439Q8NDP4 499 aa11.44□□□□□ -0.58
SCARNA20.5-201ENST00000516991 UBALD1Q8TB05 177 aa11.44□□□□□ -0.58
SCARNA20.5-201ENST00000516991 APH1BQ8WW43 257 aa11.44□□□□□ -0.58
SCARNA20.5-201ENST00000516991 CHCHD3Q9NX63 227 aaKnown RBP11.44□□□□□ -0.58
SCARNA20.5-201ENST00000516991 U3KQK5 164 aa11.44□□□□□ -0.58
SCARNA20.5-201ENST00000516991 TRBV5-5A0A0J9YX44 114 aa11.43□□□□□ -0.58
SCARNA20.5-201ENST00000516991 LANCL1O43813 399 aa11.43□□□□□ -0.58
SCARNA20.5-201ENST00000516991 GPX5O75715 221 aa11.43□□□□□ -0.58
SCARNA20.5-201ENST00000516991 ETV1P50549 477 aa11.43□□□□□ -0.58
SCARNA20.5-201ENST00000516991 MED21Q13503 144 aa11.43□□□□□ -0.58
SCARNA20.5-201ENST00000516991 FHL3Q13643 280 aa11.43□□□□□ -0.58
SCARNA20.5-201ENST00000516991 OR2G6Q5TZ20 316 aa11.43□□□□□ -0.58
SCARNA20.5-201ENST00000516991 STEAP3Q658P3 488 aa11.43□□□□□ -0.58
SCARNA20.5-201ENST00000516991 ZNF555Q8NEP9 628 aa11.43□□□□□ -0.58
SCARNA20.5-201ENST00000516991 RDH12Q96NR8 316 aa11.43□□□□□ -0.58
SCARNA20.5-201ENST00000516991 HSPB9Q9BQS6 159 aa11.43□□□□□ -0.58
SCARNA20.5-201ENST00000516991 BABAM2Q9NXR7 383 aa11.43□□□□□ -0.58
SCARNA20.5-201ENST00000516991 ETAA1Q9NY74 926 aa11.43□□□□□ -0.58
SCARNA20.5-201ENST00000516991 ZNF107Q9UII5 783 aaPredicted RBP11.43□□□□□ -0.58
SCARNA20.5-201ENST00000516991 MRPS28Q9Y2Q9 187 aaKnown RBP11.43□□□□□ -0.58
SCARNA20.5-201ENST00000516991 EXOSC1Q9Y3B2 195 aaKnown RBP11.43□□□□□ -0.58
SCARNA20.5-201ENST00000516991 LSM4Q9Y4Z0 139 aaKnown RBP11.43□□□□□ -0.58
SCARNA20.5-201ENST00000516991 A0A1W2PP11 408 aa11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 FAM90A10PA6NDY2 464 aa11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 FAM90A7PA6NKC0 464 aa11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 FAM90A23PA8MXZ1 464 aa11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 SLC31A2O15432 143 aa11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 WBP4O75554 376 aaKnown RBP11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 HBZP02008 142 aa11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 PSMB8P28062 276 aa11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 ECI1P42126 302 aa11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 LSAMPQ13449 338 aa11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 Q499Y3 187 aa11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 YIF1BQ5BJH7 314 aa11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 SYT6Q5T7P8 510 aaPredicted RBP11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 RAB12Q6IQ22 244 aa11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 ZNF554Q86TJ5 538 aa11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 CDH26Q8IXH8 852 aa11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 GAPTQ8N292 157 aa11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 PQLC1Q8N2U9 271 aa11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 MYOZ3Q8TDC0 251 aa11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 KCTD7Q96MP8 289 aa11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 PRR25Q96S07 402 aa11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 SLC29A1Q99808 456 aa11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 DIMT1Q9UNQ2 313 aaKnown RBP11.42□□□□□ -0.58
SCARNA20.5-201ENST00000516991 STAB2Q8WWQ8 2551 aa11.41□□□□□ -0.58
SCARNA20.5-201ENST00000516991 ZNF736B4DX44 427 aaPredicted RBP11.41□□□□□ -0.58
SCARNA20.5-201ENST00000516991 GLAP06280 429 aa11.41□□□□□ -0.58
SCARNA20.5-201ENST00000516991 OR8U8P0C7N1 319 aa11.41□□□□□ -0.58
SCARNA20.5-201ENST00000516991 INSL3P51460 131 aa11.41□□□□□ -0.58
SCARNA20.5-201ENST00000516991 MMDQ15546 238 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms