RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 ATXN7L3Q14CW9 347 aaPredicted RBP5.4□□□□□ -1.54
CLDND1-229ENST00000513988 TMEM30BQ3MIR4 351 aa5.4□□□□□ -1.54
CLDND1-229ENST00000513988 SPIN3Q5JUX0 258 aa5.4□□□□□ -1.54
CLDND1-229ENST00000513988 CLVS2Q5SYC1 327 aa5.4□□□□□ -1.54
CLDND1-229ENST00000513988 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.4□□□□□ -1.54
CLDND1-229ENST00000513988 Q8IYB0 196 aa5.4□□□□□ -1.54
CLDND1-229ENST00000513988 OFCC1Q8IZS5 231 aa5.4□□□□□ -1.54
CLDND1-229ENST00000513988 FAM58AQ8N1B3 248 aa5.4□□□□□ -1.54
CLDND1-229ENST00000513988 LINC00311Q8N616 119 aa5.4□□□□□ -1.54
CLDND1-229ENST00000513988 UXS1Q8NBZ7 420 aa5.4□□□□□ -1.54
CLDND1-229ENST00000513988 NPBQ8NG41 125 aa5.4□□□□□ -1.54
CLDND1-229ENST00000513988 OR10A7Q8NGE5 316 aa5.4□□□□□ -1.54
CLDND1-229ENST00000513988 OR2T4Q8NH00 348 aa5.4□□□□□ -1.54
CLDND1-229ENST00000513988 USMG5Q96IX5 58 aa5.4□□□□□ -1.54
CLDND1-229ENST00000513988 ABHD6Q9BV23 337 aa5.4□□□□□ -1.54
CLDND1-229ENST00000513988 FBXL15Q9H469 300 aa5.4□□□□□ -1.54
CLDND1-229ENST00000513988 LINC00574Q9H8X3 128 aa5.4□□□□□ -1.54
CLDND1-229ENST00000513988 RBFOX1Q9NWB1 397 aaKnown RBP5.4□□□□□ -1.54
CLDND1-229ENST00000513988 CD300AQ9UGN4 299 aa5.4□□□□□ -1.54
CLDND1-229ENST00000513988 CELA1Q9UNI1 258 aa5.4□□□□□ -1.54
CLDND1-229ENST00000513988 RAP2CQ9Y3L5 183 aa5.4□□□□□ -1.54
CLDND1-229ENST00000513988 MEIKINA0A087WXM9 373 aa5.39□□□□□ -1.55
CLDND1-229ENST00000513988 FAM230AA0A1W2PPH8 454 aa5.39□□□□□ -1.55
CLDND1-229ENST00000513988 NPIPB11E5RHQ5 1161 aa5.39□□□□□ -1.55
CLDND1-229ENST00000513988 FCN1O00602 326 aa5.39□□□□□ -1.55
CLDND1-229ENST00000513988 ARPC3O15145 178 aa5.39□□□□□ -1.55
CLDND1-229ENST00000513988 ZNF44P15621 663 aa5.39□□□□□ -1.55
CLDND1-229ENST00000513988 H2AFXP16104 143 aaPredicted RBP5.39□□□□□ -1.55
CLDND1-229ENST00000513988 FUT3P21217 361 aa5.39□□□□□ -1.55
CLDND1-229ENST00000513988 OPRL1P41146 370 aa5.39□□□□□ -1.55
CLDND1-229ENST00000513988 YAP1P46937 504 aaKnown RBP5.39□□□□□ -1.55
CLDND1-229ENST00000513988 SCN1BQ07699 218 aa5.39□□□□□ -1.55
CLDND1-229ENST00000513988 TEX30Q5JUR7 227 aa5.39□□□□□ -1.55
CLDND1-229ENST00000513988 SLC25A26Q70HW3 274 aa5.39□□□□□ -1.55
CLDND1-229ENST00000513988 TCEANCQ8N8B7 351 aa5.39□□□□□ -1.55
CLDND1-229ENST00000513988 ZNRF2Q8NHG8 242 aa5.39□□□□□ -1.55
CLDND1-229ENST00000513988 ZNRF4Q8WWF5 429 aa5.39□□□□□ -1.55
CLDND1-229ENST00000513988 SPAG8Q99932 426 aaPredicted RBP5.39□□□□□ -1.55
CLDND1-229ENST00000513988 TMEM120AQ9BXJ8 343 aa5.39□□□□□ -1.55
CLDND1-229ENST00000513988 KRTAP4-11Q9BYQ6 195 aa5.39□□□□□ -1.55
CLDND1-229ENST00000513988 SDR39U1Q9NRG7 319 aaPredicted RBP5.39□□□□□ -1.55
CLDND1-229ENST00000513988 TRBV5-3A0A0A0MS03 114 aa5.38□□□□□ -1.55
CLDND1-229ENST00000513988 TRBV2A0A0J9YWF9 115 aa5.38□□□□□ -1.55
CLDND1-229ENST00000513988 A0A0U1RQV5 110 aa5.38□□□□□ -1.55
CLDND1-229ENST00000513988 UNC119BA6NIH7 251 aa5.38□□□□□ -1.55
CLDND1-229ENST00000513988 SSTR5P35346 364 aa5.38□□□□□ -1.55
CLDND1-229ENST00000513988 SLC18A1P54219 525 aa5.38□□□□□ -1.55
CLDND1-229ENST00000513988 KLF10Q13118 480 aa5.38□□□□□ -1.55
CLDND1-229ENST00000513988 SLC25A48Q6ZT89 311 aaKnown RBP5.38□□□□□ -1.55
CLDND1-229ENST00000513988 TRPM8Q7Z2W7 1104 aa5.38□□□□□ -1.55
CLDND1-229ENST00000513988 APRG1Q8IVJ8 170 aa5.38□□□□□ -1.55
CLDND1-229ENST00000513988 C8orf31Q8N9H6 132 aa5.38□□□□□ -1.55
CLDND1-229ENST00000513988 GRPEL2Q8TAA5 225 aa5.38□□□□□ -1.55
CLDND1-229ENST00000513988 APOPT1Q96IL0 206 aa5.38□□□□□ -1.55
CLDND1-229ENST00000513988 C20orf173Q96LM9 149 aa5.38□□□□□ -1.55
CLDND1-229ENST00000513988 CLCC1Q96S66 551 aa5.38□□□□□ -1.55
CLDND1-229ENST00000513988 IFT27Q9BW83 186 aa5.38□□□□□ -1.55
CLDND1-229ENST00000513988 KIF25Q9UIL4 384 aa5.38□□□□□ -1.55
CLDND1-229ENST00000513988 GSTK1Q9Y2Q3 226 aa5.38□□□□□ -1.55
CLDND1-229ENST00000513988 TNXBP22105 4242 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 A0A0U1RQV1 116 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 A0A1B0GW64 132 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 TMEM213A2RRL7 107 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 RRHO14718 337 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 RIPK2O43353 540 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 SPAG7O75391 227 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 CYB5AP00167 134 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 BPGMP07738 259 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 P0C879 139 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 HOXA5P20719 270 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 BCL3P20749 454 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 OR3A3P47888 321 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 LGALS7P47929 136 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 ZNF137PP52743 207 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 EXOSC2Q13868 293 aaKnown RBP5.37□□□□□ -1.55
CLDND1-229ENST00000513988 SLC35F1Q5T1Q4 408 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 METTL21CQ5VZV1 264 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 C17orf53Q8N3J3 647 aaPredicted RBP5.37□□□□□ -1.55
CLDND1-229ENST00000513988 OR6N2Q8NGY6 317 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 FANK1Q8TC84 345 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 OR51E1Q8TCB6 317 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 AMELYQ99218 206 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 GPR84Q9NQS5 396 aa5.37□□□□□ -1.55
CLDND1-229ENST00000513988 A0A1W2PPQ1 181 aa5.36□□□□□ -1.55
CLDND1-229ENST00000513988 ZNF320A2RRD8 509 aa5.36□□□□□ -1.55
CLDND1-229ENST00000513988 SMIM23A6NLE4 172 aa5.36□□□□□ -1.55
CLDND1-229ENST00000513988 FAM220BPB1ANY3 271 aa5.36□□□□□ -1.55
CLDND1-229ENST00000513988 J3KTA2 159 aa5.36□□□□□ -1.55
CLDND1-229ENST00000513988 SDCBPO00560 298 aaPredicted RBP5.36□□□□□ -1.55
CLDND1-229ENST00000513988 RGS13O14921 159 aa5.36□□□□□ -1.55
CLDND1-229ENST00000513988 LANCL1O43813 399 aa5.36□□□□□ -1.55
CLDND1-229ENST00000513988 IDH3BO43837 385 aa5.36□□□□□ -1.55
CLDND1-229ENST00000513988 TUSC2O75896 110 aa5.36□□□□□ -1.55
CLDND1-229ENST00000513988 DHRS3O75911 302 aa5.36□□□□□ -1.55
CLDND1-229ENST00000513988 HLA-AP01891 365 aaKnown RBP5.36□□□□□ -1.55
CLDND1-229ENST00000513988 GCSHP23434 173 aa5.36□□□□□ -1.55
CLDND1-229ENST00000513988 ATP1B3P54709 279 aa5.36□□□□□ -1.55
CLDND1-229ENST00000513988 CDK5R1Q15078 307 aa5.36□□□□□ -1.55
CLDND1-229ENST00000513988 TTC32Q5I0X7 151 aa5.36□□□□□ -1.55
CLDND1-229ENST00000513988 PAGE3Q5JUK9 113 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms