RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 NEK7Q8TDX7 302 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 PTX4Q96A99 478 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 MRPL18Q9H0U6 180 aaKnown RBP6.66□□□□□ -1.34
NEDD4-210ENST00000513957 RIMS4Q9H426 269 aaPredicted RBP6.66□□□□□ -1.34
NEDD4-210ENST00000513957 RAB18Q9NP72 206 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 CALYQ9NYX4 217 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 STEAP1Q9UHE8 339 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 KIF25Q9UIL4 384 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 VPREB3Q9UKI3 123 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 MGAT4AQ9UM21 535 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 SSR3Q9UNL2 185 aa6.66□□□□□ -1.34
NEDD4-210ENST00000513957 AMMECR1Q9Y4X0 333 aaPredicted RBP6.66□□□□□ -1.34
NEDD4-210ENST00000513957 TRIM64CA6NLI5 447 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 IFITM5A6NNB3 132 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 OOSP1A8MZH6 123 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 AIPO00170 330 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 SCGNO76038 276 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 MPIG6BO95866 241 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 ARG1P05089 322 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 RAB3BP20337 219 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 COX7A1P24310 79 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 CDK2P24941 298 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 CEACAM3P40198 252 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 PRRX1P54821 245 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 ARL6IP1Q15041 203 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 C17orf58Q2M2W7 97 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 LRRC75BQ2VPJ9 315 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 CCDC144NLQ6NUI1 221 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 MOB1BQ7L9L4 216 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 PDZD9Q8IXQ8 264 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 ABHD12Q8N2K0 398 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 PNKDQ8N490 385 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 FAM89BQ8N5H3 189 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.65□□□□□ -1.34
NEDD4-210ENST00000513957 C8orf31Q8N9H6 132 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 OR9G1Q8NH87 305 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 PLPPR1Q8TBJ4 325 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 FAM3DQ96BQ1 224 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 KIRREL1Q96J84 757 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 KCTD7Q96MP8 289 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 NEDD4LQ96PU5 975 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 NKX3-1Q99801 234 aaPredicted RBP6.65□□□□□ -1.34
NEDD4-210ENST00000513957 BANF2Q9H503 90 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 MBNL3Q9NUK0 354 aaKnown RBP6.65□□□□□ -1.34
NEDD4-210ENST00000513957 TXNL4BQ9NX01 149 aaKnown RBP6.65□□□□□ -1.34
NEDD4-210ENST00000513957 ETAA1Q9NY74 926 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 IDI2-AS1Q9NZ38 188 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 SCOCQ9UIL1 159 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 PITPNC1Q9UKF7 332 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 HSF4Q9ULV5 492 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 AK6Q9Y3D8 172 aaKnown RBP6.65□□□□□ -1.34
NEDD4-210ENST00000513957 PEX16Q9Y5Y5 336 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 COL6A5A8TX70 2615 aa6.65□□□□□ -1.34
NEDD4-210ENST00000513957 FBN1P35555 2871 aaKnown RBP6.65□□□□□ -1.35
NEDD4-210ENST00000513957 MDFIC2A0A1B0GVS7 189 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 NOTOA8MTQ0 251 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 TOR1AO14656 332 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 SPINT2O43291 252 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 NDUFA7O95182 113 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 IGLV1-47P01700 117 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 MT-ND4P03905 459 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 CRYBA1P05813 215 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 CD36P16671 472 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 JUNBP17275 347 aaPredicted RBP6.64□□□□□ -1.35
NEDD4-210ENST00000513957 HTR1DP28221 377 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 CHATP28329 748 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 UNC119Q13432 240 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 P2RY14Q15391 338 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 HLA-DRB5Q30154 266 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 STEAP3Q658P3 488 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 C22orf42Q6IC83 251 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 CROCCP3Q8IVE0 287 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 MFSD4AQ8N468 514 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 OR56B1Q8NGI3 324 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 OR4P4Q8NGL7 312 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 OR13A1Q8NGR1 328 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 MRGPRDQ8TDS7 321 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 GCDHQ92947 438 aaPredicted RBP6.64□□□□□ -1.35
NEDD4-210ENST00000513957 FAM46BQ96A09 425 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 GFI1Q99684 422 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 LPAR5Q9H1C0 372 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 RANBP3Q9H6Z4 567 aaPredicted RBP6.64□□□□□ -1.35
NEDD4-210ENST00000513957 RAB22AQ9UL26 194 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 MMP24Q9Y5R2 645 aa6.64□□□□□ -1.35
NEDD4-210ENST00000513957 TRBV6-6A0A0A6YYG2 114 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 METTL21EPA6NDL7 271 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 LEUTXA8MZ59 168 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 C15orf65H3BRN8 121 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 F2RL2O00254 374 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 LDLRAD4O15165 306 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 IGHV4-59P01825 116 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 GADD45AP24522 165 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 BRS3P32247 399 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 SSTR5P35346 364 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 DLX1P56177 255 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 HTD2P86397 168 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 DYNC1I2Q13409 638 aaKnown RBP6.63□□□□□ -1.35
NEDD4-210ENST00000513957 NEDD8Q15843 81 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 PRAMEF5Q5TYX0 476 aa6.63□□□□□ -1.35
NEDD4-210ENST00000513957 SIGIRRQ6IA17 410 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms