RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 CRLF1O75462 422 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 MOSP00540 346 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 CSN2P05814 226 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 CPMP14384 443 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 PAX1P15863 534 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 SPI1P17947 270 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 WT1P19544 449 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 PRKACGP22612 351 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 ZBTB25P24278 435 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 S100A11P31949 105 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 GPR18Q14330 331 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 HAGHLQ6PII5 290 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 TBPL2Q6SJ96 375 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 LRRC28Q86X40 367 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 ZNRF2Q8NHG8 242 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 ZC2HC1AQ96GY0 325 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 EBPLQ9BY08 206 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 SEC61A2Q9H9S3 476 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 LOC100130705A0A1B0GUX0 176 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 A0A1B0GXF2 115 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 GAGE12BA1L429 117 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 GAGE12HA6NDE8 117 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 C9orf118A6NHY6 69 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 ZNF587BE7ETH6 402 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 K7ERU9 68 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 IGHV3-9P01782 118 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 TTRP02766 147 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 SPNP16150 400 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 ELK3P41970 407 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 HSPE1P61604 102 aaKnown RBP5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 RAP1AP62834 184 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 ZNF92Q03936 586 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 QPRTQ15274 297 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 VMACQ2NL98 169 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 TMEM255AQ5JRV8 349 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 RSBN1Q5VWQ0 802 aaPredicted RBP5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 KDM4DQ6B0I6 523 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 FAM24BQ8N5W8 94 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 SFT2D1Q8WV19 159 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 OR52E6Q96RD3 313 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 SERPINI1Q99574 410 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 TMEM222Q9H0R3 208 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 POPDC3Q9HBV1 291 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 POU2F3Q9UKI9 436 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 ORC6Q9Y5N6 252 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 SCN5AQ14524 2016 aa5.04□□□□□ -1.6
TRAPPC11-209ENST00000512476 LINC01553A4QN01 128 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 FAM172BPA6NC97 362 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 TRMUO75648 421 aaKnown RBP5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 AIFM1O95831 613 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 C6orf47O95873 294 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 P01737 135 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 FRMD6-AS1P0C7T7 363 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 FOLR2P14207 255 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 RPS3P23396 243 aaKnown RBP eCLIP5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 MYCNOSP40205 109 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 HIST1H3AP68431 136 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 RPL24P83731 157 aaKnown RBP5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 H3F3AP84243 136 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 GSG1Q2KHT4 349 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 Q6ZTK2 550 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 HIST2H3AQ71DI3 136 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 YTHDF3Q7Z739 585 aaKnown RBP5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 OR10AD1Q8NGE0 317 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 RPUSD4Q96CM3 377 aaKnown RBP5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 ZNF689Q96CS4 500 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 DCUN1D1Q96GG9 259 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 NDFIP1Q9BT67 221 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 RIOK2Q9BVS4 552 aaKnown RBP5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 CACYBPQ9HB71 228 aaKnown RBP5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 RBM22Q9NW64 420 aaKnown RBP eCLIP5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 A0A0G2JN53 185 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 A0A1B0GVT2 93 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 A0A1B0GW64 132 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 GMNCA6NCL1 334 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 LINC01619G3V211 115 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 KCNK2O95069 426 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 SEMA4FO95754 770 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 NUDT14O95848 222 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 ALPLP05186 524 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 ZNF30P17039 623 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 TCN2P20062 427 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 PIGPP57054 158 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 ZNF169Q14929 603 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 ECSCRQ19T08 205 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 TNFAIP8L2Q6P589 184 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 CXCL17Q6UXB2 119 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 ZNF793Q6ZN11 406 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 Q6ZPA2 131 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 ZNF571Q7Z3V5 609 aaPredicted RBP5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 NT5CQ8TCD5 201 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 FXYD5Q96DB9 178 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 RHNO1Q9BSD3 238 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 PITPNM3Q9BZ71 974 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 LHX9Q9NQ69 397 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 RBFOX1Q9NWB1 397 aaKnown RBP5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 RAB22AQ9UL26 194 aa5.03□□□□□ -1.6
TRAPPC11-209ENST00000512476 A0A087X0T9 212 aa5.02□□□□□ -1.61
TRAPPC11-209ENST00000512476 A0A0G2JRQ6 117 aa5.02□□□□□ -1.61
TRAPPC11-209ENST00000512476 A0A1B0GWB2 263 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms