RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 FAM89BQ8N5H3 189 aa12.93□□□□□ -0.34
PDLIM5-212ENST00000509333 SULT4A1Q9BR01 284 aa12.93□□□□□ -0.34
PDLIM5-212ENST00000509333 FAAP24Q9BTP7 215 aa12.93□□□□□ -0.34
PDLIM5-212ENST00000509333 ZNF702PQ9H963 129 aa12.93□□□□□ -0.34
PDLIM5-212ENST00000509333 GFOD1Q9NXC2 390 aa12.93□□□□□ -0.34
PDLIM5-212ENST00000509333 TRAPPC2LQ9UL33 140 aa12.93□□□□□ -0.34
PDLIM5-212ENST00000509333 RRP15Q9Y3B9 282 aaKnown RBP12.93□□□□□ -0.34
PDLIM5-212ENST00000509333 CALRP27797 417 aaKnown RBP12.92□□□□□ -0.34
PDLIM5-212ENST00000509333 CHATP28329 748 aa12.92□□□□□ -0.34
PDLIM5-212ENST00000509333 PSMD7P51665 324 aa12.92□□□□□ -0.34
PDLIM5-212ENST00000509333 C2orf76Q3KRA6 126 aa12.92□□□□□ -0.34
PDLIM5-212ENST00000509333 FBLN7Q53RD9 439 aa12.92□□□□□ -0.34
PDLIM5-212ENST00000509333 C11orf88Q6PI97 169 aa12.92□□□□□ -0.34
PDLIM5-212ENST00000509333 C5orf24Q7Z6I8 188 aa12.92□□□□□ -0.34
PDLIM5-212ENST00000509333 LINC00311Q8N616 119 aa12.92□□□□□ -0.34
PDLIM5-212ENST00000509333 C8orf31Q8N9H6 132 aa12.92□□□□□ -0.34
PDLIM5-212ENST00000509333 OR2T6Q8NHC8 308 aa12.92□□□□□ -0.34
PDLIM5-212ENST00000509333 MRPL30Q8TCC3 161 aaKnown RBP12.92□□□□□ -0.34
PDLIM5-212ENST00000509333 LPAR5Q9H1C0 372 aa12.92□□□□□ -0.34
PDLIM5-212ENST00000509333 KCNK15Q9H427 330 aa12.92□□□□□ -0.34
PDLIM5-212ENST00000509333 SERTAD4Q9NUC0 356 aa12.92□□□□□ -0.34
PDLIM5-212ENST00000509333 MBNL3Q9NUK0 354 aaKnown RBP12.92□□□□□ -0.34
PDLIM5-212ENST00000509333 V9GY05 133 aa12.92□□□□□ -0.34
PDLIM5-212ENST00000509333 A0A0A6YYD4 124 aa12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 TRAV1-2A0A0B4J238 106 aa12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 SHISA3A0PJX4 238 aa12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 ARSBP15848 533 aa12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 ZNF134P52741 427 aa12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 TMEM50BP56557 158 aa12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 MADCAM1Q13477 382 aa12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 HABP2Q14520 560 aaPredicted RBP12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 P2RY14Q15391 338 aa12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 CCDC144NLQ6NUI1 221 aa12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 OR2W3Q7Z3T1 314 aa12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 C6orf201Q7Z4U5 140 aa12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 OR1L1Q8NH94 360 aa12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 NEDD4LQ96PU5 975 aa12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 OCSTAMPQ9BR26 566 aa12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 NICN1Q9BSH3 213 aa12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 TMEM59Q9BXS4 323 aa12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 PRSS22Q9GZN4 317 aa12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 PLGRKTQ9HBL7 147 aa12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 TAF9BQ9HBM6 251 aa12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 NDUFB11Q9NX14 153 aa12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 AMMECR1Q9Y4X0 333 aaPredicted RBP12.91□□□□□ -0.34
PDLIM5-212ENST00000509333 VWFP04275 2813 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 IGHV3-43A0A0B4J1X8 118 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 SDCBPO00560 298 aaPredicted RBP12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 LDLRAD4O15165 306 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 SOCS1O15524 211 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 SPINT2O43291 252 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 HBZP02008 142 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 AMY1AP04745 511 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 AMY2AP04746 511 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 IGHV3-43DP0DP04 118 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 GALP22466 123 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 BLVRBP30043 206 aaPredicted RBP12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 MNDAP41218 407 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 GNG10P50151 68 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 CLDN12P56749 244 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 Q3ZCU0 254 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 C6orf183Q5T699 404 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 STEAP3Q658P3 488 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 C16orf82Q7Z2V1 217 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 ZNF554Q86TJ5 538 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 SVOPQ8N4V2 548 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 OR51D1Q8NGF3 324 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 ST6GALNAC6Q969X2 333 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 RPEQ96AT9 228 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 FAM3DQ96BQ1 224 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 RBM14Q96PK6 669 aaKnown RBP12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 LIN7BQ9HAP6 207 aa12.9□□□□□ -0.34
PDLIM5-212ENST00000509333 CMYA5Q8N3K9 4069 aa12.89□□□□□ -0.35
PDLIM5-212ENST00000509333 FOXI3A8MTJ6 420 aaPredicted RBP12.89□□□□□ -0.35
PDLIM5-212ENST00000509333 CCRL2O00421 344 aa12.89□□□□□ -0.35
PDLIM5-212ENST00000509333 FAM106CPP0CH98 169 aa12.89□□□□□ -0.35
PDLIM5-212ENST00000509333 RAB7AP51149 207 aa12.89□□□□□ -0.35
PDLIM5-212ENST00000509333 ARHGDIBP52566 201 aa12.89□□□□□ -0.35
PDLIM5-212ENST00000509333 RAB11BQ15907 218 aa12.89□□□□□ -0.35
PDLIM5-212ENST00000509333 CT45A1Q5HYN5 189 aa12.89□□□□□ -0.35
PDLIM5-212ENST00000509333 NKAPLQ5M9Q1 402 aa12.89□□□□□ -0.35
PDLIM5-212ENST00000509333 TREML4Q6UXN2 200 aa12.89□□□□□ -0.35
PDLIM5-212ENST00000509333 DRAM1Q8N682 238 aa12.89□□□□□ -0.35
PDLIM5-212ENST00000509333 ZNF439Q8NDP4 499 aa12.89□□□□□ -0.35
PDLIM5-212ENST00000509333 OR10X1Q8NGY0 326 aa12.89□□□□□ -0.35
PDLIM5-212ENST00000509333 CT45A3Q8NHU0 189 aa12.89□□□□□ -0.35
PDLIM5-212ENST00000509333 WIPF2Q8TF74 440 aaPredicted RBP12.89□□□□□ -0.35
PDLIM5-212ENST00000509333 CAPSLQ8WWF8 208 aa12.89□□□□□ -0.35
PDLIM5-212ENST00000509333 CFHR4Q92496 578 aa12.89□□□□□ -0.35
PDLIM5-212ENST00000509333 WNT10AQ9GZT5 417 aa12.89□□□□□ -0.35
PDLIM5-212ENST00000509333 A0A1W2PPI3 338 aa12.88□□□□□ -0.35
PDLIM5-212ENST00000509333 TIMM23O14925 209 aa12.88□□□□□ -0.35
PDLIM5-212ENST00000509333 OR2F2O95006 317 aa12.88□□□□□ -0.35
PDLIM5-212ENST00000509333 NAPSAO96009 420 aa12.88□□□□□ -0.35
PDLIM5-212ENST00000509333 GAPDHP04406 335 aaKnown RBP12.88□□□□□ -0.35
PDLIM5-212ENST00000509333 EBI3Q14213 229 aa12.88□□□□□ -0.35
PDLIM5-212ENST00000509333 HERPUD1Q15011 391 aa12.88□□□□□ -0.35
PDLIM5-212ENST00000509333 MORN2Q502X0 79 aa12.88□□□□□ -0.35
PDLIM5-212ENST00000509333 ZNF880Q6PDB4 577 aa12.88□□□□□ -0.35
PDLIM5-212ENST00000509333 TRAT1Q6PIZ9 186 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms