RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 VN1R4Q7Z5H5 301 aa1.82□□□□□ -2.12
HMGB1P28-201ENST00000507778 CRLF3Q8IUI8 442 aa1.82□□□□□ -2.12
HMGB1P28-201ENST00000507778 ZBTB8OSQ8IWT0 167 aa1.82□□□□□ -2.12
HMGB1P28-201ENST00000507778 OR10D4PQ8NGN7 298 aa1.82□□□□□ -2.12
HMGB1P28-201ENST00000507778 ANGPTL6Q8NI99 470 aa1.82□□□□□ -2.12
HMGB1P28-201ENST00000507778 CHST5Q9GZS9 411 aa1.82□□□□□ -2.12
HMGB1P28-201ENST00000507778 ZNF286AQ9HBT8 521 aa1.82□□□□□ -2.12
HMGB1P28-201ENST00000507778 BRD4O60885 1362 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P28-201ENST00000507778 PTPRKQ15262 1439 aa1.82□□□□□ -2.12
HMGB1P28-201ENST00000507778 NUP153P49790 1475 aaKnown RBP1.82□□□□□ -2.12
HMGB1P28-201ENST00000507778 IGKV1-12A0A0C4DH73 117 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 TRPC5OSA6NMA1 111 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 F5H5K5 113 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 F5H5T6 163 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 C3orf84H3BNL1 204 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 J3QLI3 93 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 K7EQS6 105 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 TOR1AO14656 332 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 TP53I11O14683 189 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 DENRO43583 198 aaKnown RBP1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 ZNF73O43830 326 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 IGKV1D-12P01611 117 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 PVALBP20472 110 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 GADD45AP24522 165 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 FUSP35637 526 aaKnown RBP eCLIP1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 SULT1A2P50226 295 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 PSMD7P51665 324 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 STC1P52823 247 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 DLX6P56179 175 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 GTF2BQ00403 316 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 OR8G1Q15617 311 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 EXOC3L4Q17RC7 722 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 HENMT1Q5T8I9 393 aaKnown RBP1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 SLC13A5Q86YT5 568 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 ZNRF2Q8NHG8 242 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 CD200R1Q8TD46 325 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 ATP6V1G3Q96LB4 118 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 SLC19A3Q9BZV2 496 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 C11orf49Q9H6J7 331 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 C1orf109Q9NX04 203 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 TMEM216Q9P0N5 145 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 CD300AQ9UGN4 299 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 VPREB3Q9UKI3 123 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 WASHC3Q9Y3C0 194 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 ZSWIM8A7E2V4 1837 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 DYSFO75923 2080 aa1.81□□□□□ -2.12
HMGB1P28-201ENST00000507778 LINC00854A0A1B0GVQ3 168 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 A8MWP6 167 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 F8VZ95 297 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 SMLR1H3BR10 107 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 SCN2BO60939 215 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 NDUFS6O75380 124 aaKnown RBP1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 FBP1P09467 338 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 RD3LP0DJH9 198 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 CBR1P16152 277 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 CASQ1P31415 396 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 PMS2P3Q13401 168 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 ZNHIT3Q15649 155 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 MAPK14Q16539 360 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 SPIN4Q56A73 249 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 CENPWQ5EE01 88 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 EBLN2Q6P2I7 272 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 SPNS3Q6ZMD2 512 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 SPATA24Q86W54 205 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 BOD1L2Q8IYS8 172 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 C2orf73Q8N5S3 287 aaPredicted RBP1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 OR2V1Q8NHB1 315 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 OR5K1Q8NHB7 308 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 MFSD8Q8NHS3 518 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 TAMM41Q96BW9 452 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 C20orf166-AS1Q96NR2 134 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 EBNA1BP2Q99848 306 aaKnown RBP1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 ZNF251Q9BRH9 671 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 BBS2Q9BXC9 721 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 NDEL1Q9GZM8 345 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 SPACA1Q9HBV2 294 aa1.8□□□□□ -2.12
HMGB1P28-201ENST00000507778 H3BSA7 217 aa1.79□□□□□ -2.12
HMGB1P28-201ENST00000507778 M0QYV0 167 aa1.79□□□□□ -2.12
HMGB1P28-201ENST00000507778 COILP38432 576 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P28-201ENST00000507778 KRTAP6-3Q3LI67 103 aa1.79□□□□□ -2.12
HMGB1P28-201ENST00000507778 ZNF322Q6U7Q0 402 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P28-201ENST00000507778 OR10P1Q8NGE3 313 aa1.79□□□□□ -2.12
HMGB1P28-201ENST00000507778 PHOSPHO2Q8TCD6 241 aa1.79□□□□□ -2.12
HMGB1P28-201ENST00000507778 GTSF1LQ9H1H1 148 aa1.79□□□□□ -2.12
HMGB1P28-201ENST00000507778 LRRC19Q9H756 370 aa1.79□□□□□ -2.12
HMGB1P28-201ENST00000507778 CFAP45Q9UL16 551 aa1.79□□□□□ -2.12
HMGB1P28-201ENST00000507778 SCML1Q9UN30 329 aa1.79□□□□□ -2.12
HMGB1P28-201ENST00000507778 OR51B4Q9Y5P0 310 aa1.79□□□□□ -2.12
HMGB1P28-201ENST00000507778 GMEB1Q9Y692 573 aa1.79□□□□□ -2.12
HMGB1P28-201ENST00000507778 MTCH2Q9Y6C9 303 aa1.79□□□□□ -2.12
HMGB1P28-201ENST00000507778 CACNA1DQ01668 2161 aa1.79□□□□□ -2.12
HMGB1P28-201ENST00000507778 SDK2Q58EX2 2172 aa1.79□□□□□ -2.12
HMGB1P28-201ENST00000507778 HIVEP2P31629 2446 aa1.79□□□□□ -2.12
HMGB1P28-201ENST00000507778 PRR14LQ5THK1 2151 aa1.78□□□□□ -2.12
HMGB1P28-201ENST00000507778 MIA3Q5JRA6 1907 aa1.78□□□□□ -2.12
HMGB1P28-201ENST00000507778 CEP170Q5SW79 1584 aa1.78□□□□□ -2.12
HMGB1P28-201ENST00000507778 IGSF23A1L1A6 192 aa1.78□□□□□ -2.12
HMGB1P28-201ENST00000507778 CRTAPO75718 401 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P28-201ENST00000507778 PSG4Q00888 419 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms