RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 NXF2Q9GZY0 626 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 NAA50Q9GZZ1 169 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 HDHD2Q9H0R4 259 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 ZDHHC11Q9H8X9 412 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 CALHM2Q9HA72 323 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 ELOVL3Q9HB03 270 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 PLEKHA1Q9HB21 404 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 PROK2Q9HC23 129 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 CRLF2Q9HC73 371 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 TMEM138Q9NPI0 162 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 POLE4Q9NR33 117 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 TUBG2Q9NRH3 451 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 MED29Q9NX70 200 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 TAS2R8Q9NYW2 309 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 GHRLQ9UBU3 117 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 CYB5R1Q9UHQ9 305 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 MRM2Q9UI43 246 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 ATPIF1Q9UII2 106 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 OR52A1Q9UKL2 312 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 FZR1Q9UM11 496 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 HHLA2Q9UM44 414 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 FOXJ3Q9UPW0 622 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 NOSIPQ9Y314 301 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 STRAPQ9Y3F4 350 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 FLVCR1Q9Y5Y0 555 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 MRPS18BQ9Y676 258 aaKnown RBP1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 R4GMQ9 66 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 V9GY05 133 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 THADAQ6YHU6 1953 aa1.85□□□□□ -2.11
TOPBP1-205ENST00000506779 FANCMQ8IYD8 2048 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 TNRC6BQ9UPQ9 1833 aaKnown RBP1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 ATG2BQ96BY7 2078 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 ZFYVE26Q68DK2 2539 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 BAHCC1Q9P281 2608 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 A0A0A6YYH2 397 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 A0A0U1RQV5 110 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 METTL21EPA6NDL7 271 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 A6NJ64 397 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 OR4C45A6NMZ5 311 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 IFITM5A6NNB3 132 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF716A6NP11 495 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 C17orf51A8MQB3 221 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 FAM166BA8MTA8 275 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 FAM25AB3EWG3 89 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 FAM25CB3EWG5 89 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 FAM25GB3EWG6 89 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 H0YC42 278 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 H7C1C5 153 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 K7ENP7 123 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 AIPO00170 330 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 DCTN6O00399 190 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 XRCC2O43543 280 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 SGCEO43556 437 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 SS18L1O75177 396 aaPredicted RBP1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 ZNF780AO75290 641 aaPredicted RBP1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 UPK1BO75841 260 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 UBL3O95164 117 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 PTTG1O95997 202 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 LALBAP00709 142 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 F10P00742 488 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 OPN1LWP04000 364 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 ALDOBP05062 364 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 GSTT2BP0CG30 244 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 UBBP0CG47 229 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 COX5BP10606 129 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 MGMTP16455 207 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 RAB3AP20336 220 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 IGHV1-2P23083 117 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 DDOSTP39656 456 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 EVX1P49640 407 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 STARP49675 285 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 P2RY4P51582 365 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 HCCSP53701 268 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 CLDN18P56856 261 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 LCN6P62502 163 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 RPS25P62851 125 aaKnown RBP1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 HIST1H3AP68431 136 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 SRYQ05066 204 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 FMODQ06828 376 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 RIPPLY1Q0D2K3 151 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 IL18Q14116 193 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 GAMTQ14353 236 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 GPR176Q14439 515 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 RAB35Q15286 201 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 RAB11BQ15907 218 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 TRIM16LQ309B1 348 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 PYDC2Q56P42 97 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 UBE2NLQ5JXB2 153 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 HIST2H3PS2Q5TEC6 136 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 FBXW9Q5XUX1 488 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 TRIQKQ629K1 86 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 RAB12Q6IQ22 244 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 PYHIN1Q6K0P9 492 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 TMEM53Q6P2H8 277 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 SFXN4Q6P4A7 337 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 FAM131AQ6UXB0 335 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 C2orf66Q6UXQ4 117 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 TMEM91Q6ZNR0 172 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 Q6ZS92 163 aa1.84□□□□□ -2.11
TOPBP1-205ENST00000506779 HIST2H3AQ71DI3 136 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms