RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 ZDHHC8Q9ULC8 765 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 SCAF4O95104 1147 aaKnown RBP9.56□□□□□ -0.88
NFKB1-205ENST00000505458 PTAFRP25105 342 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 IL2RGP31785 369 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 ZNF83P51522 516 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 TMPRSS3P57727 454 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 ABHD17AQ96GS6 310 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 ZNF835Q9Y2P0 537 aa9.56□□□□□ -0.88
NFKB1-205ENST00000505458 IGKV1D-13A0A0B4J2D9 117 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 H0YL77 283 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 WRBO00258 174 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 HSD17B6O14756 317 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 SEC11BP0C7V7 166 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 IGKV1-13P0DP09 117 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 RCC1P18754 421 aaPredicted RBP9.55□□□□□ -0.88
NFKB1-205ENST00000505458 TBR1Q16650 682 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 COMMD1Q8N668 190 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 ARV1Q9H2C2 271 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 TAS2R3Q9NYW6 316 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 FBXL17Q9UF56 701 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 OR14J1Q9UGF5 321 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 TP53TG5Q9Y2B4 290 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 MSGN1A6NI15 193 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 ZNHIT1O43257 154 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 SPINT2O43291 252 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 LY86O95711 162 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 Q6ZR03 302 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 ZNF645Q8N7E2 425 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 LRRC29Q8WV35 223 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 EDARADDQ8WWZ3 215 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 SNX22Q96L94 193 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 RAB40CQ96S21 281 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 MMP26Q9NRE1 261 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 LPAR3Q9UBY5 353 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 CACFD1Q9UGQ2 172 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 MUC6Q6W4X9 2439 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 FAM90A26D6RGX4 464 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 HTD2P86397 168 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 GFRALQ6UXV0 394 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 C20orf204Q6ZNR8 217 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 IL1F10Q8WWZ1 152 aa9.55□□□□□ -0.88
NFKB1-205ENST00000505458 BARX1Q9HBU1 254 aaPredicted RBP9.55□□□□□ -0.88
NFKB1-205ENST00000505458 STRAPQ9Y3F4 350 aaKnown RBP9.55□□□□□ -0.88
NFKB1-205ENST00000505458 C16orf97H3BN30 126 aa9.54□□□□□ -0.88
NFKB1-205ENST00000505458 MGST3O14880 152 aa9.54□□□□□ -0.88
NFKB1-205ENST00000505458 WISP2O76076 250 aa9.54□□□□□ -0.88
NFKB1-205ENST00000505458 GZMHP20718 246 aa9.54□□□□□ -0.88
NFKB1-205ENST00000505458 SULT1A2P50226 295 aa9.54□□□□□ -0.88
NFKB1-205ENST00000505458 TMEM33P57088 247 aa9.54□□□□□ -0.88
NFKB1-205ENST00000505458 FOXRED2Q8IWF2 684 aa9.54□□□□□ -0.88
NFKB1-205ENST00000505458 OR2Z1Q8NG97 314 aa9.54□□□□□ -0.88
NFKB1-205ENST00000505458 RNASE11Q8TAA1 199 aaKnown RBP9.54□□□□□ -0.88
NFKB1-205ENST00000505458 LHFPL5Q8TAF8 219 aa9.54□□□□□ -0.88
NFKB1-205ENST00000505458 COL25A1Q9BXS0 654 aaPredicted RBP9.54□□□□□ -0.88
NFKB1-205ENST00000505458 RCL1Q9Y2P8 373 aaKnown RBP9.54□□□□□ -0.88
NFKB1-205ENST00000505458 TESK1Q15569 626 aa9.54□□□□□ -0.88
NFKB1-205ENST00000505458 RELL2Q8NC24 303 aaPredicted RBP9.54□□□□□ -0.88
NFKB1-205ENST00000505458 COA4Q9NYJ1 87 aa9.54□□□□□ -0.88
NFKB1-205ENST00000505458 PITX3O75364 302 aa9.54□□□□□ -0.88
NFKB1-205ENST00000505458 CRYZL1O95825 349 aa9.54□□□□□ -0.88
NFKB1-205ENST00000505458 PRAMEF6Q5VXH4 476 aa9.54□□□□□ -0.88
NFKB1-205ENST00000505458 OR2C3Q8N628 320 aa9.54□□□□□ -0.88
NFKB1-205ENST00000505458 SMIM8Q96KF7 97 aa9.54□□□□□ -0.88
NFKB1-205ENST00000505458 MEGF10Q96KG7 1140 aa9.54□□□□□ -0.88
NFKB1-205ENST00000505458 PARP11Q9NR21 331 aa9.54□□□□□ -0.88
NFKB1-205ENST00000505458 LYRM2Q9NU23 88 aaPredicted RBP9.54□□□□□ -0.88
NFKB1-205ENST00000505458 IL19Q9UHD0 177 aa9.54□□□□□ -0.88
NFKB1-205ENST00000505458 RIF1Q5UIP0 2472 aaKnown RBP9.53□□□□□ -0.88
NFKB1-205ENST00000505458 NKX2-6A6NCS4 301 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 OR3A1P47881 315 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 RPL23AP62750 156 aaKnown RBP9.53□□□□□ -0.88
NFKB1-205ENST00000505458 ID3Q02535 119 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 SWI5Q1ZZU3 235 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 KRBOX4Q5JUW0 171 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 ZNF66Q6ZN08 573 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 GINS3Q9BRX5 216 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 SCNM1Q9BWG6 230 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 KCNS2Q9ULS6 477 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 ZNF292O60281 2723 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 ADAM20O43506 726 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 ZNF205O95201 554 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 ARHGDIBP52566 201 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 CASP6P55212 293 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 DOLPP1Q86YN1 238 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 SPAG16Q8N0X2 631 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 Q8TCH9 128 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 CD300LFQ8TDQ1 290 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 TMEM171Q8WVE6 324 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 TMED6Q8WW62 240 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 GVINP1Q7Z2Y8 2422 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 VPS13AQ96RL7 3174 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 ITGB1BP1O14713 200 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 DFFBO76075 338 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 CD40P25942 277 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 PRDX2P32119 198 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 CEACAM6P40199 344 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 GABRA2P47869 451 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 TAS2R30P59541 319 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 COL10A1Q03692 680 aa9.53□□□□□ -0.88
NFKB1-205ENST00000505458 RPL7L1Q6DKI1 246 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms