RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 ZNF322Q6U7Q0 402 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-207ENST00000503974 MEPCEQ7L2J0 689 aaKnown RBP8.29□□□□□ -1.08
PDLIM5-207ENST00000503974 NEGR1Q7Z3B1 354 aa8.29□□□□□ -1.08
PDLIM5-207ENST00000503974 CEACAM19Q7Z692 300 aa8.29□□□□□ -1.08
PDLIM5-207ENST00000503974 OR4N2Q8NGD1 307 aa8.29□□□□□ -1.08
PDLIM5-207ENST00000503974 OR51A2Q8NGJ7 313 aa8.29□□□□□ -1.08
PDLIM5-207ENST00000503974 OR10X1Q8NGY0 326 aa8.29□□□□□ -1.08
PDLIM5-207ENST00000503974 LGALS14Q8TCE9 139 aa8.29□□□□□ -1.08
PDLIM5-207ENST00000503974 C15orf40Q8WUR7 153 aa8.29□□□□□ -1.08
PDLIM5-207ENST00000503974 RNF138Q8WVD3 245 aa8.29□□□□□ -1.08
PDLIM5-207ENST00000503974 AQP10Q96PS8 301 aa8.29□□□□□ -1.08
PDLIM5-207ENST00000503974 PYGO2Q9BRQ0 406 aa8.29□□□□□ -1.08
PDLIM5-207ENST00000503974 SH2D2AQ9NP31 389 aa8.29□□□□□ -1.08
PDLIM5-207ENST00000503974 SIRT4Q9Y6E7 314 aaPredicted RBP8.29□□□□□ -1.08
PDLIM5-207ENST00000503974 KCNE3Q9Y6H6 103 aa8.29□□□□□ -1.08
PDLIM5-207ENST00000503974 CACNA1GO43497 2377 aa8.29□□□□□ -1.08
PDLIM5-207ENST00000503974 TRAV1-2A0A0B4J238 106 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 CLDN34H7C241 214 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 TNFRSF13BO14836 293 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 TAX1BP3O14907 124 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 KLF4O43474 513 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 SOX14O95416 240 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 CH25HO95992 272 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 CHRM2P08172 466 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 TNFRSF1BP20333 461 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 MDKP21741 143 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 NNATQ16517 81 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 LTC4SQ16873 150 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 TP53I3Q53FA7 332 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 OPN5Q6U736 354 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 ZNF66Q6ZN08 573 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 BCORP1Q8N888 145 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 DIO2Q92813 273 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 RAX2Q96IS3 184 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 UCN2Q96RP3 112 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 A4GALTQ9NPC4 353 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 SLC7A10Q9NS82 523 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 J3KTA2 159 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 GCM2O75603 506 aaPredicted RBP8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 CDS2O95674 445 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 IGKV1D-16P01601 117 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 FAM87AP0C7U9 286 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 IGLC1P0CG04 106 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 SMIM17P0DL12 118 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 GATA3P23771 443 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 CLDN15P56746 228 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 UBE2NP61088 152 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 EGR4Q05215 589 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 PLCXD2Q0VAA5 305 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 DCST2Q5T1A1 773 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 RPL7L1Q6DKI1 246 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 ZNF429Q86V71 674 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 ZNF440Q8IYI8 595 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 PNKDQ8N490 385 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 OR10S1Q8NGN2 331 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 ZNF417Q8TAU3 575 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 ABHD4Q8TB40 342 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 SMPDL3BQ92485 455 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 RAB8BQ92930 207 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 SLAMF6Q96DU3 332 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 MRM2Q9UI43 246 aaKnown RBP8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 HSF4Q9ULV5 492 aa8.28□□□□□ -1.08
PDLIM5-207ENST00000503974 NPIPA5A0A0B4J1W7 369 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 TRAV34A0A0B4J273 112 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 C2orf72A6NCS6 295 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 MSGN1A6NI15 193 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 NPIPA5E9PKD4 350 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 NPIPA3F8WFD2 350 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 NEURL1O76050 574 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 HAND1O96004 215 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 RPL23AP62750 156 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 GNB2P62879 340 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 ARG2P78540 354 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 CEACAM21Q3KPI0 293 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 C5orf47Q569G3 176 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 SPIN3Q5JUX0 258 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 WBP2NLQ6ICG8 309 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 LINC00696Q6ZRV3 163 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 TGIF2LYQ8IUE0 185 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 PRR22Q8IZ63 422 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 SMIM20Q8N5G0 67 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 ZNF709Q8N972 641 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 MDS2Q8NDY4 140 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 IL22RA2Q969J5 263 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 SIGLEC12Q96PQ1 595 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 SDF2Q99470 211 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 TPPP3Q9BW30 176 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 SLC13A4Q9UKG4 626 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 NPIPA1Q9UND3 350 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 UBE2J1Q9Y385 318 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 NOP16Q9Y3C1 178 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 CHCHD2Q9Y6H1 151 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 LAMA5O15230 3695 aa8.27□□□□□ -1.09
PDLIM5-207ENST00000503974 IGHV2-26A0A0B4J1V2 119 aa8.26□□□□□ -1.09
PDLIM5-207ENST00000503974 IGSF23A1L1A6 192 aa8.26□□□□□ -1.09
PDLIM5-207ENST00000503974 FIGNL2A6NMB9 653 aa8.26□□□□□ -1.09
PDLIM5-207ENST00000503974 H0YIZ8 118 aa8.26□□□□□ -1.09
PDLIM5-207ENST00000503974 H0YL77 283 aa8.26□□□□□ -1.09
PDLIM5-207ENST00000503974 J3QR06 171 aa8.26□□□□□ -1.09
PDLIM5-207ENST00000503974 M0QXV9 152 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms