RNA–Protein interactions for RNA: ENST00000503856.5

PDGFRA-203, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-203ENST00000503856 FAM53AQ6NSI3 398 aaPredicted RBP16.64■□□□□ 0.25
PDGFRA-203ENST00000503856 Q6ZSV7 163 aa16.64■□□□□ 0.25
PDGFRA-203ENST00000503856 MRPL30Q8TCC3 161 aaKnown RBP16.64■□□□□ 0.25
PDGFRA-203ENST00000503856 CHCHD6Q9BRQ6 235 aa16.64■□□□□ 0.25
PDGFRA-203ENST00000503856 MMP28Q9H239 520 aa16.64■□□□□ 0.25
PDGFRA-203ENST00000503856 PLEKHJ1Q9NW61 149 aa16.64■□□□□ 0.25
PDGFRA-203ENST00000503856 MMP24Q9Y5R2 645 aa16.64■□□□□ 0.25
PDGFRA-203ENST00000503856 IGHV3-43A0A0B4J1X8 118 aa16.63■□□□□ 0.25
PDGFRA-203ENST00000503856 LY6LH3BQJ8 138 aa16.63■□□□□ 0.25
PDGFRA-203ENST00000503856 F2RL2O00254 374 aa16.63■□□□□ 0.25
PDGFRA-203ENST00000503856 SDCBPO00560 298 aaPredicted RBP16.63■□□□□ 0.25
PDGFRA-203ENST00000503856 IGHV3-43DP0DP04 118 aa16.63■□□□□ 0.25
PDGFRA-203ENST00000503856 VEGFCP49767 419 aa16.63■□□□□ 0.25
PDGFRA-203ENST00000503856 GNG10P50151 68 aa16.63■□□□□ 0.25
PDGFRA-203ENST00000503856 DYNLT3P51808 116 aa16.63■□□□□ 0.25
PDGFRA-203ENST00000503856 LOXL3P58215 753 aa16.63■□□□□ 0.25
PDGFRA-203ENST00000503856 SLC16A12Q6ZSM3 486 aa16.63■□□□□ 0.25
PDGFRA-203ENST00000503856 OR52M1Q8NGK5 317 aa16.63■□□□□ 0.25
PDGFRA-203ENST00000503856 OR1L1Q8NH94 360 aa16.63■□□□□ 0.25
PDGFRA-203ENST00000503856 CREB3L1Q96BA8 519 aa16.63■□□□□ 0.25
PDGFRA-203ENST00000503856 RNF167Q9H6Y7 350 aa16.63■□□□□ 0.25
PDGFRA-203ENST00000503856 BEX1Q9HBH7 125 aa16.63■□□□□ 0.25
PDGFRA-203ENST00000503856 MBNL3Q9NUK0 354 aaKnown RBP16.63■□□□□ 0.25
PDGFRA-203ENST00000503856 A0A0B4J203 849 aa16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 LOC100506127A0A0U1RQW1 187 aa16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 A0A1W2PPE3 182 aa16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 FOXI3A8MTJ6 420 aaPredicted RBP16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 SPINT2O43291 252 aa16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 HBZP02008 142 aa16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 SLC2A2P11168 524 aaPredicted RBP16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 CEACAM3P40198 252 aa16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 TMEM50BP56557 158 aa16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 TPTE2P1Q5T6R2 138 aa16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 TRAT1Q6PIZ9 186 aa16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 CCBE1Q6UXH8 406 aaPredicted RBP16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 C5orf24Q7Z6I8 188 aa16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 TPRA1Q86W33 373 aa16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 PRR18Q8N4B5 295 aa16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 ZNF696Q9H7X3 374 aa16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 LIN7BQ9HAP6 207 aa16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 TAF9BQ9HBM6 251 aa16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 GFOD1Q9NXC2 390 aa16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 RAB22AQ9UL26 194 aa16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 TCF19Q9Y242 345 aa16.62■□□□□ 0.25
PDGFRA-203ENST00000503856 A0A1B0GUS0 222 aa16.61■□□□□ 0.25
PDGFRA-203ENST00000503856 A6NDX4 124 aa16.61■□□□□ 0.25
PDGFRA-203ENST00000503856 POM121CA8CG34 1229 aa16.61■□□□□ 0.25
PDGFRA-203ENST00000503856 HAX1O00165 279 aa16.61■□□□□ 0.25
PDGFRA-203ENST00000503856 CHST1O43916 411 aa16.61■□□□□ 0.25
PDGFRA-203ENST00000503856 EFNB2P52799 333 aa16.61■□□□□ 0.25
PDGFRA-203ENST00000503856 TMEM219Q86XT9 240 aa16.61■□□□□ 0.25
PDGFRA-203ENST00000503856 LINC01006Q8NI28 216 aa16.61■□□□□ 0.25
PDGFRA-203ENST00000503856 KCTD7Q96MP8 289 aa16.61■□□□□ 0.25
PDGFRA-203ENST00000503856 ZNF747Q9BV97 191 aa16.61■□□□□ 0.25
PDGFRA-203ENST00000503856 VCX3AQ9NNX9 186 aa16.61■□□□□ 0.25
PDGFRA-203ENST00000503856 RAB9BQ9NP90 201 aa16.61■□□□□ 0.25
PDGFRA-203ENST00000503856 KCNIP1Q9NZI2 227 aa16.61■□□□□ 0.25
PDGFRA-203ENST00000503856 HSF4Q9ULV5 492 aa16.61■□□□□ 0.25
PDGFRA-203ENST00000503856 AMMECR1Q9Y4X0 333 aaPredicted RBP16.61■□□□□ 0.25
PDGFRA-203ENST00000503856 CLPSL1A2RUU4 121 aa16.6■□□□□ 0.25
PDGFRA-203ENST00000503856 NOTOA8MTQ0 251 aa16.6■□□□□ 0.25
PDGFRA-203ENST00000503856 TSPAN9O75954 239 aa16.6■□□□□ 0.25
PDGFRA-203ENST00000503856 NAPSAO96009 420 aa16.6■□□□□ 0.25
PDGFRA-203ENST00000503856 SDC2P34741 201 aa16.6■□□□□ 0.25
PDGFRA-203ENST00000503856 OLFML2AQ68BL7 652 aa16.6■□□□□ 0.25
PDGFRA-203ENST00000503856 LIAT1Q6ZQX7 453 aa16.6■□□□□ 0.25
PDGFRA-203ENST00000503856 Q6ZTK2 550 aa16.6■□□□□ 0.25
PDGFRA-203ENST00000503856 OR56B1Q8NGI3 324 aa16.6■□□□□ 0.25
PDGFRA-203ENST00000503856 ARHGAP5-AS1Q96IT6 56 aa16.6■□□□□ 0.25
PDGFRA-203ENST00000503856 CENPOQ9BU64 300 aa16.6■□□□□ 0.25
PDGFRA-203ENST00000503856 RAB18Q9NP72 206 aa16.6■□□□□ 0.25
PDGFRA-203ENST00000503856 CD24P25063 80 aa16.59■□□□□ 0.25
PDGFRA-203ENST00000503856 DIAPH2-AS1Q14236 149 aa16.59■□□□□ 0.25
PDGFRA-203ENST00000503856 Q6ZPA2 131 aa16.59■□□□□ 0.25
PDGFRA-203ENST00000503856 ZNF554Q86TJ5 538 aa16.59■□□□□ 0.25
PDGFRA-203ENST00000503856 OR10X1Q8NGY0 326 aa16.59■□□□□ 0.25
PDGFRA-203ENST00000503856 RPEQ96AT9 228 aa16.59■□□□□ 0.25
PDGFRA-203ENST00000503856 HDHD3Q9BSH5 251 aaPredicted RBP16.59■□□□□ 0.25
PDGFRA-203ENST00000503856 PECRQ9BY49 303 aa16.59■□□□□ 0.25
PDGFRA-203ENST00000503856 C16orf95Q9H693 158 aa16.59■□□□□ 0.25
PDGFRA-203ENST00000503856 CHMP1AQ9HD42 196 aaPredicted RBP16.59■□□□□ 0.25
PDGFRA-203ENST00000503856 GNG12Q9UBI6 72 aa16.59■□□□□ 0.25
PDGFRA-203ENST00000503856 AK3Q9UIJ7 227 aa16.59■□□□□ 0.25
PDGFRA-203ENST00000503856 PITPNC1Q9UKF7 332 aa16.59■□□□□ 0.25
PDGFRA-203ENST00000503856 RNF114Q9Y508 228 aa16.59■□□□□ 0.25
PDGFRA-203ENST00000503856 TRIM64CA6NLI5 447 aa16.58■□□□□ 0.24
PDGFRA-203ENST00000503856 OOSP1A8MZH6 123 aa16.58■□□□□ 0.24
PDGFRA-203ENST00000503856 CLEC2LP0C7M8 214 aa16.58■□□□□ 0.24
PDGFRA-203ENST00000503856 BRS3P32247 399 aa16.58■□□□□ 0.24
PDGFRA-203ENST00000503856 MXD1Q05195 221 aa16.58■□□□□ 0.24
PDGFRA-203ENST00000503856 MADCAM1Q13477 382 aa16.58■□□□□ 0.24
PDGFRA-203ENST00000503856 MOGAT2Q3SYC2 334 aa16.58■□□□□ 0.24
PDGFRA-203ENST00000503856 PLAC9Q5JTB6 97 aa16.58■□□□□ 0.24
PDGFRA-203ENST00000503856 LINC00311Q8N616 119 aa16.58■□□□□ 0.24
PDGFRA-203ENST00000503856 OR10V1Q8NGI7 309 aa16.58■□□□□ 0.24
PDGFRA-203ENST00000503856 TOMM40LQ969M1 308 aa16.58■□□□□ 0.24
PDGFRA-203ENST00000503856 SLC31A2O15432 143 aa16.57■□□□□ 0.24
PDGFRA-203ENST00000503856 RAB6AP20340 208 aa16.57■□□□□ 0.24
PDGFRA-203ENST00000503856 ARHGDIBP52566 201 aa16.57■□□□□ 0.24
PDGFRA-203ENST00000503856 TMEM30BQ3MIR4 351 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms