RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 NHLRC4P0CG21 123 aaPredicted RBP1.15□□□□□ -2.23
XRN1-214ENST00000498077 TAC1P20366 129 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 GATA3P23771 443 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 PAX6P26367 422 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 CST5P28325 142 aaPredicted RBP1.15□□□□□ -2.23
XRN1-214ENST00000498077 TAS2R19P59542 299 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 PLP1P60201 277 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 NTHL1P78549 312 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 FAM27E3Q08E93 113 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 PMS2P11Q13670 270 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 MESDQ14696 234 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 EIF4HQ15056 248 aaKnown RBP1.15□□□□□ -2.23
XRN1-214ENST00000498077 ODF3L2Q3SX64 289 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 Q56UQ5 140 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 TMEM200BQ69YZ2 307 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 LGALS9CQ6DKI2 356 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 PAMR1Q6UXH9 720 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 MUC15Q8N387 334 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 VN1R2Q8NFZ6 395 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 OR5AR1Q8NGP9 310 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 BLOC1S5Q8TDH9 187 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 GIMAP1Q8WWP7 306 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 VSIG2Q96IQ7 327 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 FGF22Q9HCT0 170 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 AIG1Q9NVV5 245 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 PAQR5Q9NXK6 330 aaPredicted RBP1.15□□□□□ -2.23
XRN1-214ENST00000498077 MBD2Q9UBB5 411 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 ADAM28Q9UKQ2 775 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 GTF2A1LQ9UNN4 478 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 MRPS7Q9Y2R9 242 aaKnown RBP1.15□□□□□ -2.23
XRN1-214ENST00000498077 ITPR1Q14643 2758 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 SRCAPQ6ZRS2 3230 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 A0A0G2JND7 137 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 TRAPPC2LH3BP13 241 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 CXCL13O43927 109 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 STX10O60499 249 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 FGF19O95750 216 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 IGHV2-70P01814 119 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 CLTAP09496 248 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 BCKDHAP12694 445 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 PCMT1P22061 227 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 TEAD1P28347 426 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 MPV17P39210 176 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 VHLP40337 213 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 PRCPP42785 496 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 IDH3GP51553 393 aaPredicted RBP1.15□□□□□ -2.23
XRN1-214ENST00000498077 CARD18P57730 90 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 RGS8P57771 180 aaPredicted RBP1.15□□□□□ -2.23
XRN1-214ENST00000498077 ZNF616Q08AN1 781 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 C1DQ13901 141 aaKnown RBP1.15□□□□□ -2.23
XRN1-214ENST00000498077 SMCO1Q147U7 214 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 ZNF77Q15935 545 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 LUZP6Q538Z0 58 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 GAGE2AQ6NT46 116 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 PARS2Q7L3T8 475 aaKnown RBP1.15□□□□□ -2.23
XRN1-214ENST00000498077 PPP1R32Q7Z5V6 425 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.15□□□□□ -2.23
XRN1-214ENST00000498077 CHPFQ8IZ52 775 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 C17orf78Q8N4C9 275 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 DAND5Q8N907 189 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 Q8N9P0 234 aaPredicted RBP1.15□□□□□ -2.23
XRN1-214ENST00000498077 C5orf17Q8NAS9 161 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 ANP32BQ92688 251 aaKnown RBP1.15□□□□□ -2.23
XRN1-214ENST00000498077 EMG1Q92979 244 aaKnown RBP1.15□□□□□ -2.23
XRN1-214ENST00000498077 LRRC58Q96CX6 371 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 SYT4Q9H2B2 425 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 TXNIPQ9H3M7 391 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 EBF2Q9HAK2 575 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 RBM22Q9NW64 420 aaKnown RBP eCLIP1.15□□□□□ -2.23
XRN1-214ENST00000498077 GID8Q9NWU2 228 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 COMMD9Q9P000 198 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 PEF1Q9UBV8 284 aaKnown RBP1.15□□□□□ -2.23
XRN1-214ENST00000498077 TRAPPC2LQ9UL33 140 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 DAPK1P53355 1430 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 TRAV26-2A0A0B4J265 109 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 C5orf52A6NGY3 159 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 PATE3B3GLJ2 98 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 K7ENM7 598 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 FAAHO00519 579 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 MYL12BO14950 172 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 PRPSAP2O60256 369 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 DOK2O60496 412 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 ENTPD3O75355 529 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 PIAS1O75925 651 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 SLC22A5O76082 557 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 GAGE7O76087 117 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 TOMM40O96008 361 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 GAPDHP04406 335 aaKnown RBP1.15□□□□□ -2.23
XRN1-214ENST00000498077 HEXBP07686 556 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 OR8U9P0C7N5 309 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 GAGE12FP0CL80 117 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 GAGE12GP0CL81 117 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 GAGE12IP0CL82 117 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 GAAP10253 952 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 IDH2P48735 452 aaKnown RBP1.15□□□□□ -2.23
XRN1-214ENST00000498077 MTCP1P56278 107 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 FAM3AP98173 230 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 STK4Q13043 487 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 GLIPR1L1Q6UWM5 242 aa1.15□□□□□ -2.23
XRN1-214ENST00000498077 LINC00173Q6ZV60 143 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms