RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 RCC2Q9P258 522 aaKnown RBP12.39□□□□□ -0.43
NUP50-219ENST00000497960 PITPNC1Q9UKF7 332 aa12.39□□□□□ -0.43
NUP50-219ENST00000497960 RAB22AQ9UL26 194 aa12.39□□□□□ -0.43
NUP50-219ENST00000497960 HILPDAQ9Y5L2 63 aa12.39□□□□□ -0.43
NUP50-219ENST00000497960 PEX16Q9Y5Y5 336 aa12.39□□□□□ -0.43
NUP50-219ENST00000497960 ETV7Q9Y603 341 aa12.39□□□□□ -0.43
NUP50-219ENST00000497960 CEPT1Q9Y6K0 416 aa12.39□□□□□ -0.43
NUP50-219ENST00000497960 A0A0A6YYD4 124 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 ZNF729A6NN14 1252 aaPredicted RBP12.38□□□□□ -0.43
NUP50-219ENST00000497960 MCRIP1C9JLW8 97 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 H3BMQ9 156 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 H3BUI4 141 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 M0QZ24 198 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 LDLRAD4O15165 306 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 TMEM127O75204 238 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 HTR1DP28221 377 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 KIR2DS4P43632 304 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 KCNJ3P48549 501 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 VEGFCP49767 419 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 RAB13P51153 203 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 RORCP51449 518 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 EFNB2P52799 333 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 SCAND1P57086 179 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 PLA2G7Q13093 441 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 LDLRAD2Q5SZI1 272 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 TREML4Q6UXN2 200 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 ZNF565Q8N9K5 539 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 OR2T6Q8NHC8 308 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 ZNF596Q8TC21 504 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 NCOR1P1Q9H4R4 102 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 TCF19Q9Y242 345 aa12.38□□□□□ -0.43
NUP50-219ENST00000497960 MEIKINA0A087WXM9 373 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 METTL21EPA6NDL7 271 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 F2RL2O00254 374 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 TOR1AO14656 332 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 FUT3P21217 361 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 CHATP28329 748 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 BLVRBP30043 206 aaPredicted RBP12.37□□□□□ -0.43
NUP50-219ENST00000497960 SOX6P35712 828 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 GLP1RP43220 463 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 DYNLT3P51808 116 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 KRTAP10-3P60369 221 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 RBM39Q14498 530 aaKnown RBP12.37□□□□□ -0.43
NUP50-219ENST00000497960 SIGIRRQ6IA17 410 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 C11orf88Q6PI97 169 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 PLPPR1Q8TBJ4 325 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 AP3S1Q92572 193 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 PTX4Q96A99 478 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 KCTD12Q96CX2 325 aaKnown RBP12.37□□□□□ -0.43
NUP50-219ENST00000497960 RBM38Q9H0Z9 239 aaKnown RBP12.37□□□□□ -0.43
NUP50-219ENST00000497960 ATG5Q9H1Y0 275 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 RHBDL2Q9NX52 303 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 ETAA1Q9NY74 926 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 ABRACLQ9P1F3 81 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 DPM3Q9P2X0 92 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 RSL24D1Q9UHA3 163 aaKnown RBP12.37□□□□□ -0.43
NUP50-219ENST00000497960 KIF25Q9UIL4 384 aa12.37□□□□□ -0.43
NUP50-219ENST00000497960 KBTBD11-OT1A0A1B0GTJ5 212 aa12.36□□□□□ -0.43
NUP50-219ENST00000497960 UBE2QL1A1L167 161 aa12.36□□□□□ -0.43
NUP50-219ENST00000497960 SOCS1O15524 211 aa12.36□□□□□ -0.43
NUP50-219ENST00000497960 CHST1O43916 411 aa12.36□□□□□ -0.43
NUP50-219ENST00000497960 CD34P28906 385 aa12.36□□□□□ -0.43
NUP50-219ENST00000497960 ARHGDIBP52566 201 aa12.36□□□□□ -0.43
NUP50-219ENST00000497960 PRRX1P54821 245 aa12.36□□□□□ -0.43
NUP50-219ENST00000497960 BAIAP2L2Q6UXY1 529 aa12.36□□□□□ -0.43
NUP50-219ENST00000497960 C6orf201Q7Z4U5 140 aa12.36□□□□□ -0.43
NUP50-219ENST00000497960 OR4P4Q8NGL7 312 aa12.36□□□□□ -0.43
NUP50-219ENST00000497960 OR5H6Q8NGV6 325 aa12.36□□□□□ -0.43
NUP50-219ENST00000497960 CREB3L1Q96BA8 519 aa12.36□□□□□ -0.43
NUP50-219ENST00000497960 SPATA2Q9UM82 520 aa12.36□□□□□ -0.43
NUP50-219ENST00000497960 SIGLEC9Q9Y336 463 aa12.36□□□□□ -0.43
NUP50-219ENST00000497960 SMIM31A0A1B0GVY4 71 aa12.35□□□□□ -0.43
NUP50-219ENST00000497960 TMEM30CPA0ZSE6 113 aa12.35□□□□□ -0.43
NUP50-219ENST00000497960 FAM172BPA6NC97 362 aa12.35□□□□□ -0.43
NUP50-219ENST00000497960 A6NDX4 124 aa12.35□□□□□ -0.43
NUP50-219ENST00000497960 LEUTXA8MZ59 168 aa12.35□□□□□ -0.43
NUP50-219ENST00000497960 SCGNO76038 276 aa12.35□□□□□ -0.43
NUP50-219ENST00000497960 NFYBP25208 207 aa12.35□□□□□ -0.43
NUP50-219ENST00000497960 GDNFP39905 211 aa12.35□□□□□ -0.43
NUP50-219ENST00000497960 C17orf58Q2M2W7 97 aa12.35□□□□□ -0.43
NUP50-219ENST00000497960 UBE2NLQ5JXB2 153 aa12.35□□□□□ -0.43
NUP50-219ENST00000497960 RSBN1Q5VWQ0 802 aaPredicted RBP12.35□□□□□ -0.43
NUP50-219ENST00000497960 TMEM219Q86XT9 240 aa12.35□□□□□ -0.43
NUP50-219ENST00000497960 PHF21AQ96BD5 680 aa12.35□□□□□ -0.43
NUP50-219ENST00000497960 PLEKHJ1Q9NW61 149 aa12.35□□□□□ -0.43
NUP50-219ENST00000497960 CALYQ9NYX4 217 aa12.35□□□□□ -0.43
NUP50-219ENST00000497960 CCDC59Q9P031 241 aaKnown RBP12.35□□□□□ -0.43
NUP50-219ENST00000497960 A0A075B6Q4 140 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 A0A087X0M5 115 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 A0A1B0GX30 115 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 GLAP06280 429 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 ZNF182P17025 639 aaPredicted RBP12.34□□□□□ -0.43
NUP50-219ENST00000497960 BRS3P32247 399 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 CEACAM3P40198 252 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 PAX5Q02548 391 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 MOGAT2Q3SYC2 334 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 MZT2AQ6P582 158 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 CCBE1Q6UXH8 406 aaPredicted RBP12.34□□□□□ -0.43
NUP50-219ENST00000497960 Q6ZTK2 550 aa12.34□□□□□ -0.43
NUP50-219ENST00000497960 FAM89BQ8N5H3 189 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms